FFCP PHASE1:Hg19::chr5:134906504..134906518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134906504..134906518,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr5:134906504..134906518,- | |description=CAGE_peak_at_chr5:134906504..134906518,- | ||
|id=chr5:134906504..134906518,- | |id=chr5:134906504..134906518,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000312;2.53e-09;5!CL:0000240;5.54e-08;6!CL:0000311;5.54e-08;6!CL:0000079;5.54e-08;6!CL:0000237;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,2.53e-09,5;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.54e-08;6!CL:0000114;5.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.80e-11;4!DOID:4362;3.10e-09;5!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:4362,3.22e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.71e-21!115;UBERON:0002616!1.18e-13!59;UBERON:0002780!2.12e-13!41;UBERON:0001890!2.12e-13!41;UBERON:0006240!2.12e-13!41;UBERON:0000033!4.90e-13!123;UBERON:0003080!5.03e-13!42;UBERON:0000955!1.39e-12!69;UBERON:0006238!1.39e-12!69;UBERON:0001049!2.71e-12!57;UBERON:0005068!2.71e-12!57;UBERON:0006241!2.71e-12!57;UBERON:0007135!2.71e-12!57;UBERON:0000153!3.48e-12!129;UBERON:0007811!3.48e-12!129;UBERON:0003056!2.45e-11!61;UBERON:0001017!4.76e-10!82;UBERON:0000007!5.44e-10!2;UBERON:0002619!8.04e-10!22;UBERON:0002791!1.02e-09!33;UBERON:0003075!1.38e-09!86;UBERON:0007284!1.38e-09!86;UBERON:0005743!2.01e-09!86;UBERON:0002020!2.04e-09!34;UBERON:0003528!2.04e-09!34;UBERON:0001893!2.17e-09!34;UBERON:0004121!4.77e-09!169;UBERON:0002346!5.31e-09!90;UBERON:0000924!1.02e-08!173;UBERON:0006601!1.02e-08!173;UBERON:0000956!1.51e-08!25;UBERON:0000203!1.51e-08!25;UBERON:0001950!2.19e-08!20;UBERON:0000073!3.30e-08!94;UBERON:0001016!3.30e-08!94;UBERON:0001869!3.62e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.81e-40;1!UBERON:0001003;1.24e-11;15!UBERON:0007376;1.24e-11;15!UBERON:0000014;3.26e-11;4!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0001871;6.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.48e-40,1;UBERON:0001003,1.21e-11,15;UBERON:0007376,1.21e-11,15;UBERON:0007383,1.21e-11,15;UBERON:0000014,3.10e-11,4;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0001871,6.39e-07,6 | |||
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| ||
|short_description=p@chr5:134906504..134906518,- | |short_description=p@chr5:134906504..134906518,- | ||
}} | }} |
Latest revision as of 09:58, 30 July 2015
Short description: | p@chr5:134906504..134906518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906504..134906518, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 2.53e-09 | 5 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
surface | 1.48e-40 | 1 |
skin epidermis | 1.21e-11 | 15 |
outer epithelium | 1.21e-11 | 15 |
enveloping layer of ectoderm | 1.21e-11 | 15 |
zone of skin | 3.10e-11 | 4 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
cervical cancer | 3.22e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |