FFCP PHASE1:Hg19::chr5:149868394..149868413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:149868394..149868413,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr5:149868394..149868413,+ | |description=CAGE_peak_at_chr5:149868394..149868413,+ | ||
|id=chr5:149868394..149868413,+ | |id=chr5:149868394..149868413,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.06e-31!42;CL:0000860!2.66e-28!45;CL:0000766!9.57e-26!76;CL:0000839!1.96e-21!70;CL:0000048!1.81e-20!430;CL:0000723!6.69e-20!436;CL:0002194!1.38e-19!63;CL:0000576!1.38e-19!63;CL:0000040!1.38e-19!63;CL:0000559!1.38e-19!63;CL:0000034!5.39e-19!444;CL:0000557!5.41e-19!71;CL:0002009!2.01e-18!65;CL:0000763!5.11e-18!112;CL:0000049!5.11e-18!112;CL:0000134!1.66e-17!358;CL:0002371!1.76e-17!591;CL:0002320!3.09e-16!365;CL:0000219!1.16e-15!390;CL:0000144!2.80e-15!625;CL:0000012!2.72e-10!682;CL:0000548!3.28e-10!679;CL:0000004!3.28e-10!679;CL:0000255!3.28e-10!679;CL:0000003!3.14e-08!722;CL:0000738!4.32e-08!140;CL:0000063!6.41e-08!578;CL:0002393!8.48e-08!9;CL:0002397!8.48e-08!9;CL:0000037!3.26e-07!172;CL:0000566!3.26e-07!172;CL:0000055!4.42e-07!180;CL:0000094!6.93e-07!8;CL:0002032!7.74e-07!165;CL:0000837!7.74e-07!165 | |ontology_enrichment_celltype=CL:0002057!1.06e-31!42;CL:0000860!2.66e-28!45;CL:0000766!9.57e-26!76;CL:0000839!1.96e-21!70;CL:0000048!1.81e-20!430;CL:0000723!6.69e-20!436;CL:0002194!1.38e-19!63;CL:0000576!1.38e-19!63;CL:0000040!1.38e-19!63;CL:0000559!1.38e-19!63;CL:0000034!5.39e-19!444;CL:0000557!5.41e-19!71;CL:0002009!2.01e-18!65;CL:0000763!5.11e-18!112;CL:0000049!5.11e-18!112;CL:0000134!1.66e-17!358;CL:0002371!1.76e-17!591;CL:0002320!3.09e-16!365;CL:0000219!1.16e-15!390;CL:0000144!2.80e-15!625;CL:0000012!2.72e-10!682;CL:0000548!3.28e-10!679;CL:0000004!3.28e-10!679;CL:0000255!3.28e-10!679;CL:0000003!3.14e-08!722;CL:0000738!4.32e-08!140;CL:0000063!6.41e-08!578;CL:0002393!8.48e-08!9;CL:0002397!8.48e-08!9;CL:0000037!3.26e-07!172;CL:0000566!3.26e-07!172;CL:0000055!4.42e-07!180;CL:0000094!6.93e-07!8;CL:0002032!7.74e-07!165;CL:0000837!7.74e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-34;33!CL:0002057;1.89e-34;33!CL:0000473;8.86e-25;39!CL:0000234;8.86e-25;39!CL:0000576;1.50e-24;48!CL:0000766;1.14e-20;69!CL:0000094;4.93e-14;8!CL:0000081;8.32e-10;11!CL:0000763;3.13e-09;100!CL:0002393;3.07e-08;6!CL:0002397;3.07e-08;6!CL:0000775;4.57e-08;3!CL:0000346;5.33e-07;3!CL:1000428;5.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-47,42;CL:0002057,3.92e-47,42;CL:0000473,6.72e-40,48;CL:0000234,6.72e-40,48;CL:0000766,2.68e-39,72;CL:0002194,4.04e-32,59;CL:0000576,4.04e-32,59;CL:0000040,4.04e-32,59;CL:0000559,4.04e-32,59;CL:0002009,9.77e-31,61;CL:0000839,1.20e-27,66;CL:0000557,4.39e-27,67;CL:0000763,2.69e-26,108;CL:0000049,2.69e-26,108;CL:0000738,2.19e-17,136;CL:0000134,6.50e-15,354;CL:0000219,1.68e-14,386;CL:0000037,2.55e-14,168;CL:0002320,3.00e-14,361;CL:0000094,5.20e-14,8;CL:0002087,7.30e-14,115;CL:0002032,1.57e-13,161;CL:0000837,1.57e-13,161;CL:0000048,5.02e-13,427;CL:0000988,5.83e-13,177;CL:0000723,1.47e-12,433;CL:0000034,5.83e-12,441;CL:0002031,6.67e-11,120;CL:0002393,5.45e-10,9;CL:0002397,5.45e-10,9;CL:0000081,8.62e-10,11;CL:0000775,4.62e-08,3;CL:0000346,4.58e-07,3;CL:1000428,4.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-33;42!CL:0000049;2.54e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.50e-07;5!DOID:450;5.50e-07;5!DOID:66;5.50e-07;5!DOID:423;5.50e-07;5!DOID:0080000;5.50e-07;5!DOID:11722;5.50e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.98e-07,5;DOID:450,7.98e-07,5;DOID:66,7.98e-07,5;DOID:423,7.98e-07,5;DOID:0080000,7.98e-07,5;DOID:11722,7.98e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.70e-17!167;UBERON:0002390!8.52e-17!102;UBERON:0003061!8.52e-17!102;UBERON:0002371!8.90e-17!80;UBERON:0002384!1.35e-16!375;UBERON:0004765!1.98e-16!101;UBERON:0001434!1.98e-16!101;UBERON:0001474!2.56e-16!86;UBERON:0002193!2.31e-13!112;UBERON:0002405!1.67e-08!115;UBERON:0003081!4.45e-08!216 | |ontology_enrichment_uberon=UBERON:0002204!4.70e-17!167;UBERON:0002390!8.52e-17!102;UBERON:0003061!8.52e-17!102;UBERON:0002371!8.90e-17!80;UBERON:0002384!1.35e-16!375;UBERON:0004765!1.98e-16!101;UBERON:0001434!1.98e-16!101;UBERON:0001474!2.56e-16!86;UBERON:0002193!2.31e-13!112;UBERON:0002405!1.67e-08!115;UBERON:0003081!4.45e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.33e-07;3!UBERON:0001992;5.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.38e-23,98;UBERON:0003061,1.38e-23,98;UBERON:0002371,1.08e-22,76;UBERON:0002193,2.52e-20,108;UBERON:0001474,2.60e-20,82;UBERON:0004765,4.55e-19,90;UBERON:0002405,9.26e-17,93;UBERON:0001434,3.63e-16,100;UBERON:0002384,8.70e-15,371;UBERON:0003081,3.15e-11,203;UBERON:0002204,3.12e-10,167;UBERON:0000926,6.09e-09,315;UBERON:0004120,6.09e-09,315;UBERON:0006603,6.09e-09,315;UBERON:0000412,4.58e-07,3;UBERON:0001992,4.58e-07,3 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.845726424575827,1.0007329835313,2.23480547213644,1.74467704820074,0,0,0,0.737201809504527,0,0,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.816002764977012,0,0,0,0,0.0764134057479513,0,0.236132343941038,5.11373559903575,0,2.47705797305722,0,0,0.369754010166788,0,0,0,4.9859586767869,2.4065333696417,1.73608696572681,0,0,0,5.37973483484389,4.53451132426571,2.66842467306598,2.78914844286822,2.87817521615278,1.85823822537062,1.1507695692886,1.0246428261164,0.47296445977717,2.06847408441971,1.93645405075148,2.70852973188684,4.51781614902251,2.45615535052061,1.12361742222542,3.36692281607993,1.60464513538047,1.27867425159808,1.64925650093358,1.19678194572979,1.70489900213078,1.45104619314292,1.70215567407342,0.622822248995575,0.502497330513487,2.60741459210101,0.868755378820466,0.605399502633369,1.10483290796269,0.316462387440884,1.47878700418359,1.27562579979026,0.838634582033504,4.26848798356681,3.60424542819615,3.37523732063868,1.42506371870624,1.19350006319454,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.378139268656271,0.221729397462564,0.527008714158756,0,0,0.370784442784429,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.8436212411135,54.2892369807656,0,2.48485975847659,0.25326102332916,0.926864265692532,0.286836620748814,0,0.560677600142307,2.1349799145941,3.20667812942308,0,0,0,0,0,0,0.624320153660641,1.1409436430889,0,0.117434498643765,0,0.140450806702248,0,0,0,1.18800285728205,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0,0.919463387397059,0.600952235626387,0,1.25572744982203,2.13557388818567,3.17897851739343,0.600182192168805,2.26715564324566,2.57640540045629,1.30281799432113,0,0.584622030967192,1.26216887122057,3.49789614840738,0,0,0.705264687593482,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,4.69348596989448,2.57296375277154,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,4.87148171776693,0.283550194484773,0,0,0,0,0.968532774145487,0.829312462163088,0.432359860250884,0.25248486685276,0.444485260045183,1.52795370223311,1.17217447210047,1.71072446022705,0,0,0,0,0,0.2933531432838,0.904902010304444,0,0.845302752556,0,2.08014873822732,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,1.30303176000821,0,0.895304816199478,0,0.197030760201927,0,0,0,0,0,0,0,64.4146040594577,23.932916736322,47.6577840451441,0,0,0,0.415941723061614,0.356857977594324,0.630809660135739,0.35142424497814,0.601892199455438,0,0,0,1.65932251687533,0.260650843404249,0,0,3.3082884179662,6.68714022537712,0.960548020230999,0,0,0,1.98486246255021,1.2276957863045,1.12264037773229,0.384417447767103,3.58195074346692,2.41280881715411,0,0.308419387605311,1.06537035187876,0.246381468041427,0.519254429183621,0.348631135379878,0,3.20810352485256,0.0920809889358963,0.34444334449382,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.170453254832202,0.801288320820636,0.165284915360978,0,1.02090169995667,0,1.39453664789186,0.94443704049192,1.3940745403212,0,1.06461206063404,0,0,1.00187420719394,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0.606547444719948,0,1.26377536871694,0.975267478179181,0.731140468893853,0,0,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0,1.29151611801369,1.68471475667626,0.886860307073351,0.918893600827838,2.53723804616085,0,0,1.66762242820452,0,3.24236655596359,2.70015718619057,0,0,0,0,0,0,0,0,0,0.766021480529467,0.635020748171649,0,0,0,1.25343916618419,0,0,0,0,0,1.71752672377882,0.921722292925374,0,0,2.73543333562856,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0,0,0,0,0,0.822251547880505,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.653174720218818,0,0.082092520749339,2.555820326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| ||
|short_description=p@chr5:149868394..149868413,+ | |short_description=p@chr5:149868394..149868413,+ | ||
}} | }} |
Latest revision as of 11:38, 30 July 2015
Short description: | p@chr5:149868394..149868413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:149868394..149868413, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.38e-23 | 98 |
blood island | 1.38e-23 | 98 |
bone marrow | 1.08e-22 | 76 |
hemolymphoid system | 2.52e-20 | 108 |
bone element | 2.60e-20 | 82 |
skeletal element | 4.55e-19 | 90 |
immune system | 9.26e-17 | 93 |
skeletal system | 3.63e-16 | 100 |
connective tissue | 8.70e-15 | 371 |
lateral plate mesoderm | 3.15e-11 | 203 |
musculoskeletal system | 3.12e-10 | 167 |
mesoderm | 6.09e-09 | 315 |
mesoderm-derived structure | 6.09e-09 | 315 |
presumptive mesoderm | 6.09e-09 | 315 |
dermal papilla | 4.58e-07 | 3 |
papillary layer of dermis | 4.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.98e-07 | 5 |
myotonic disease | 7.98e-07 | 5 |
muscle tissue disease | 7.98e-07 | 5 |
myopathy | 7.98e-07 | 5 |
muscular disease | 7.98e-07 | 5 |
myotonic dystrophy | 7.98e-07 | 5 |