FFCP PHASE1:Hg19::chr6:130005257..130005290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:130005257..130005290,- | |||
|coexpression_cluster_id=C2404 | |coexpression_cluster_id=C2404 | ||
|description=CAGE_peak_at_chr6:130005257..130005290,- | |description=CAGE_peak_at_chr6:130005257..130005290,- | ||
|id=chr6:130005257..130005290,- | |id=chr6:130005257..130005290,- | ||
|ontology_enrichment_celltype=CL:0000766!1.84e-40!76;CL:0000557!1.69e-34!71;CL:0000738!5.86e-34!140;CL:0000839!8.41e-34!70;CL:0000763!8.52e-32!112;CL:0000049!8.52e-32!112;CL:0000988!1.31e-31!182;CL:0002194!1.88e-31!63;CL:0000576!1.88e-31!63;CL:0000040!1.88e-31!63;CL:0000559!1.88e-31!63;CL:0000037!2.00e-31!172;CL:0000566!2.00e-31!172;CL:0002009!2.86e-31!65;CL:0002057!4.56e-31!42;CL:0002032!1.71e-28!165;CL:0000837!1.71e-28!165;CL:0000860!1.12e-27!45;CL:0002031!2.30e-26!124;CL:0002087!1.14e-24!119;CL:0000134!2.73e-14!358;CL:0002320!1.15e-13!365;CL:0000219!1.84e-12!390;CL:0000048!5.93e-08!430;CL:0000723!9.18e-08!436;CL:0000034!3.03e-07!444 | |ontology_enrichment_celltype=CL:0000766!1.84e-40!76;CL:0000557!1.69e-34!71;CL:0000738!5.86e-34!140;CL:0000839!8.41e-34!70;CL:0000763!8.52e-32!112;CL:0000049!8.52e-32!112;CL:0000988!1.31e-31!182;CL:0002194!1.88e-31!63;CL:0000576!1.88e-31!63;CL:0000040!1.88e-31!63;CL:0000559!1.88e-31!63;CL:0000037!2.00e-31!172;CL:0000566!2.00e-31!172;CL:0002009!2.86e-31!65;CL:0002057!4.56e-31!42;CL:0002032!1.71e-28!165;CL:0000837!1.71e-28!165;CL:0000860!1.12e-27!45;CL:0002031!2.30e-26!124;CL:0002087!1.14e-24!119;CL:0000134!2.73e-14!358;CL:0002320!1.15e-13!365;CL:0000219!1.84e-12!390;CL:0000048!5.93e-08!430;CL:0000723!9.18e-08!436;CL:0000034!3.03e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.62e-66;33!CL:0002057;3.62e-66;33!CL:0000473;6.99e-52;39!CL:0000234;6.99e-52;39!CL:0000576;7.15e-49;48!CL:0000766;5.24e-41;69!CL:0000763;1.98e-22;100!CL:0000094;2.22e-14;8!CL:0002087;1.01e-13;104!CL:0000738;3.96e-13;136!CL:0000775;4.88e-11;3!CL:0000081;2.97e-10;11!CL:0000784;1.77e-09;3!CL:0002393;4.48e-08;6!CL:0002397;4.48e-08;6!CL:0000219;8.55e-08;193!CL:0000097;9.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.59e-92,72;CL:0000860,6.76e-76,42;CL:0002057,6.76e-76,42;CL:0000839,2.98e-75,66;CL:0000473,5.34e-74,48;CL:0000234,5.34e-74,48;CL:0000557,5.51e-74,67;CL:0002194,3.73e-72,59;CL:0000576,3.73e-72,59;CL:0000040,3.73e-72,59;CL:0000559,3.73e-72,59;CL:0002009,1.71e-69,61;CL:0000763,4.86e-63,108;CL:0000049,4.86e-63,108;CL:0000738,3.51e-59,136;CL:0000037,1.17e-49,168;CL:0002032,3.42e-48,161;CL:0000837,3.42e-48,161;CL:0002031,1.22e-47,120;CL:0000988,1.70e-46,177;CL:0002087,9.96e-43,115;CL:0000134,1.07e-19,354;CL:0002320,4.64e-19,361;CL:0000219,8.16e-17,386;CL:0000094,2.13e-14,8;CL:0000048,4.55e-14,427;CL:0000723,1.09e-13,433;CL:0000034,3.36e-13,441;CL:0000775,3.89e-11,3;CL:0000081,2.88e-10,11;CL:0000784,1.04e-09,3;CL:0002393,4.13e-08,9;CL:0002397,4.13e-08,9;CL:0000097,8.88e-07,5;CL:0002028,8.88e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.71e-55;42!CL:0000049;3.49e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.28e-30!80;UBERON:0002390!2.21e-29!102;UBERON:0003061!2.21e-29!102;UBERON:0002193!6.35e-29!112;UBERON:0001474!7.41e-28!86;UBERON:0002405!3.40e-27!115;UBERON:0004765!2.33e-22!101;UBERON:0001434!2.33e-22!101;UBERON:0003081!1.36e-13!216;UBERON:0002384!1.48e-12!375;UBERON:0002204!1.19e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!2.28e-30!80;UBERON:0002390!2.21e-29!102;UBERON:0003061!2.21e-29!102;UBERON:0002193!6.35e-29!112;UBERON:0001474!7.41e-28!86;UBERON:0002405!3.40e-27!115;UBERON:0004765!2.33e-22!101;UBERON:0001434!2.33e-22!101;UBERON:0003081!1.36e-13!216;UBERON:0002384!1.48e-12!375;UBERON:0002204!1.19e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.78e-67,76;UBERON:0001474,8.50e-62,82;UBERON:0004765,2.17e-55,90;UBERON:0002405,2.86e-53,93;UBERON:0002390,1.64e-52,98;UBERON:0003061,1.64e-52,98;UBERON:0001434,8.22e-49,100;UBERON:0002193,1.15e-46,108;UBERON:0002204,5.65e-25,167;UBERON:0003081,3.17e-22,203;UBERON:0002384,3.43e-18,371;UBERON:0000926,3.67e-11,315;UBERON:0004120,3.67e-11,315;UBERON:0006603,3.67e-11,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0,0,0.136874425072884,0,1.83392173795083,1.80621296789881,1.33808328233255,1.18009283054671,0.383829398097213,1.54816123316076,0,0,0,0,0,0.587200878669695,1.10799081706375,0,1.30206522429511,0.671746422719773,1.29557466407592,2.06060454107349,2.76256653681173,3.02300754951048,2.18325655069035,4.64858073811369,1.6446715520873,3.09706370895104,3.45230870786581,5.63553554364021,5.43909128743746,7.58440497620561,4.51839278508678,5.41705946377367,3.01187743268168,3.0019676506363,2.02251136000576,5.50951006267625,7.38136762275015,3.19668562899521,3.29851300186716,4.58766412529753,4.26224750532694,0.870627715885752,1.70215567407342,1.24564449799115,3.76872997885115,3.65038042894141,3.9093992046921,1.21079900526674,0.368277635987565,1.58231193720442,1.69004229049553,0.637812899895131,1.67726916406701,0.673971786878971,0.300353785683013,0.964353520182481,0,1.79025009479181,0.547992461293902,0,0,0,0,0,0.574752439954483,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0.649094787309367,1.74129737299267,0.531831842075461,1.90792499444274,1.14398982156026,1.85728750664782,0.79504962946682,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,1.20848795132744,0,0,0,0,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0.183201743930407,7.9068250461638,0,0,0,0,0.529636723252875,0,0,0,0,0,0.933633106199299,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0.323745888736263,0.842704840213491,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0,0,0,0.380508304469197,0,0,1.23108503043699,0.702012795417713,0.148631162288728,0,0.671928512795438,0,0,0,0,0.985326475791887,0.792435906119034,2.90259361757081,5.90891809009542,10.8568492746687,0,0.381988425558278,0,0,0,0,0,0.560655421726804,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,4.86495122564762,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0,0,3.74503511973591,5.9832291840805,5.8018171881045,0,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,0,0.979005787313703,0,0.620304078368662,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.510281115829547,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,1.08890984861323,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0.684704037099577,0,2.50634477090067,0,0.321176150207399,0.403599414382095,0,0,0,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0.586032717087576,0,0.222886768554957,0.284136146806413,0,0.593929361665277,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0.615424027305347,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,1.56980256395025,0,0,0,0.167821586975843,0.189753732724185,0.635746315921515,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.247247575143499,0.539228350833479,0.0984274815147488,0,0,0,0,0,0,0,0.77380195455795,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr6:130005257..130005290,- | |short_description=p@chr6:130005257..130005290,- | ||
}} | }} |
Latest revision as of 19:20, 30 July 2015
Short description: | p@chr6:130005257..130005290, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:130005257..130005290, - |
Coexpression cluster: | C2404_CD14_Mast_Eosinophils_Neutrophils_Mesenchymal_Basophils_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-67 | 76 |
bone element | 8.50e-62 | 82 |
skeletal element | 2.17e-55 | 90 |
immune system | 2.86e-53 | 93 |
hematopoietic system | 1.64e-52 | 98 |
blood island | 1.64e-52 | 98 |
skeletal system | 8.22e-49 | 100 |
hemolymphoid system | 1.15e-46 | 108 |
musculoskeletal system | 5.65e-25 | 167 |
lateral plate mesoderm | 3.17e-22 | 203 |
connective tissue | 3.43e-18 | 371 |
mesoderm | 3.67e-11 | 315 |
mesoderm-derived structure | 3.67e-11 | 315 |
presumptive mesoderm | 3.67e-11 | 315 |