FFCP PHASE1:Hg19::chr6:46159025..46159070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:46159025..46159070,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_at_chr6:46159025..46159070,+ | |description=CAGE_peak_at_chr6:46159025..46159070,+ | ||
|id=chr6:46159025..46159070,+ | |id=chr6:46159025..46159070,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.36e-36!11;UBERON:0006947!2.81e-34!3;UBERON:0004054!2.81e-34!3;UBERON:0001301!2.16e-26!1;UBERON:0001000!2.78e-26!1;UBERON:0005352!2.78e-26!1;UBERON:0005904!5.23e-26!4;UBERON:0003101!1.33e-18!22;UBERON:0000079!1.33e-18!22;UBERON:0003127!1.55e-13!2;UBERON:0000473!1.94e-13!8;UBERON:0000058!2.59e-09!26;UBERON:0003133!9.00e-09!48;UBERON:0005156!3.33e-07!59;UBERON:0000990!3.33e-07!59;UBERON:0006555!8.34e-07!17;UBERON:0005103!8.34e-07!17;UBERON:0000083!8.34e-07!17;UBERON:0009201!8.34e-07!17;UBERON:0004819!8.34e-07!17;UBERON:0006553!8.34e-07!17;UBERON:0003074!8.34e-07!17;UBERON:0003060!8.34e-07!17;UBERON:0003886!9.84e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.98e-131;3!UBERON:0004054;8.98e-131;3!UBERON:0001301;9.37e-99;1!UBERON:0005904;1.55e-98;4!UBERON:0001000;2.55e-98;1!UBERON:0005352;2.55e-98;1!UBERON:0000058;2.00e-40;10!UBERON:0003135;6.80e-37;11!UBERON:0004175;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0003133;3.42e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.98e-131,3;UBERON:0004054,8.98e-131,3;UBERON:0001301,9.37e-99,1;UBERON:0005904,1.55e-98,4;UBERON:0001000,2.55e-98,1;UBERON:0005352,2.55e-98,1;UBERON:0003135,6.80e-37,11;UBERON:0000058,5.37e-22,19;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0004175,4.64e-17,25;UBERON:0005103,9.39e-14,8;UBERON:0000083,9.39e-14,8;UBERON:0009201,9.39e-14,8;UBERON:0006553,9.39e-14,8;UBERON:0003074,9.39e-14,8;UBERON:0003060,9.39e-14,8;UBERON:0000080,2.19e-12,9;UBERON:0002120,2.19e-12,9;UBERON:0004875,2.19e-12,9;UBERON:0005721,2.19e-12,9;UBERON:0005754,2.19e-12,9;UBERON:0007297,2.19e-12,9;UBERON:0004876,2.16e-10,11;UBERON:0003887,1.22e-09,12;UBERON:0003133,1.62e-09,48;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16 | |||
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|short_description=p@chr6:46159025..46159070,+ | |short_description=p@chr6:46159025..46159070,+ | ||
}} | }} | ||
Latest revision as of 02:06, 31 July 2015
| Short description: | p@chr6:46159025..46159070, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr6:46159025..46159070, + |
| Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| male genital duct | 8.98e-131 | 3 |
| internal male genitalia | 8.98e-131 | 3 |
| epididymis | 9.37e-99 | 1 |
| duct of male reproductive system | 1.55e-98 | 4 |
| vas deferens | 2.55e-98 | 1 |
| spermatic cord | 2.55e-98 | 1 |
| male reproductive organ | 6.80e-37 | 11 |
| duct | 5.37e-22 | 19 |
| male organism | 3.41e-19 | 22 |
| male reproductive system | 3.41e-19 | 22 |
| internal genitalia | 4.64e-17 | 25 |
| mesonephric epithelium | 9.39e-14 | 8 |
| mesonephric tubule | 9.39e-14 | 8 |
| nephric duct | 9.39e-14 | 8 |
| renal duct | 9.39e-14 | 8 |
| mesonephric duct | 9.39e-14 | 8 |
| pronephric duct | 9.39e-14 | 8 |
| mesonephros | 2.19e-12 | 9 |
| pronephros | 2.19e-12 | 9 |
| nephrogenic cord | 2.19e-12 | 9 |
| pronephric mesoderm | 2.19e-12 | 9 |
| rostral part of nephrogenic cord | 2.19e-12 | 9 |
| presumptive pronephric mesoderm | 2.19e-12 | 9 |
| urogenital ridge | 2.16e-10 | 11 |
| intraembryonic coelom | 1.22e-09 | 12 |
| reproductive organ | 1.62e-09 | 48 |
| reproductive structure | 5.66e-08 | 59 |
| reproductive system | 5.66e-08 | 59 |
| excretory tube | 1.45e-07 | 16 |
| kidney epithelium | 1.45e-07 | 16 |