FFCP PHASE1:Hg19::chr7:93516178..93516195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516178..93516195,- | |||
|coexpression_cluster_id=C378 | |coexpression_cluster_id=C378 | ||
|description=CAGE_peak_at_chr7:93516178..93516195,- | |description=CAGE_peak_at_chr7:93516178..93516195,- | ||
Latest revision as of 12:35, 31 July 2015
| Short description: | p@chr7:93516178..93516195, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr7:93516178..93516195, - |
| Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr7:93516178..93516195- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 4.42e-23 | 32 |
| smooth muscle cell | 1.26e-21 | 43 |
| smooth muscle myoblast | 1.26e-21 | 43 |
| muscle cell | 4.32e-16 | 55 |
| muscle precursor cell | 4.56e-15 | 58 |
| myoblast | 4.56e-15 | 58 |
| multi-potent skeletal muscle stem cell | 4.56e-15 | 58 |
| smooth muscle cell of the subclavian artery | 5.55e-15 | 5 |
| electrically responsive cell | 3.81e-14 | 61 |
| electrically active cell | 3.81e-14 | 61 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 1.92e-21 | 83 |
| artery | 2.54e-19 | 42 |
| arterial blood vessel | 2.54e-19 | 42 |
| arterial system | 2.54e-19 | 42 |
| left ovary | 2.62e-18 | 4 |
| systemic artery | 2.88e-16 | 33 |
| systemic arterial system | 2.88e-16 | 33 |
| trunk blood vessel | 6.97e-16 | 7 |
| thoracic segment blood vessel | 5.55e-15 | 5 |
| subclavian artery | 5.55e-15 | 5 |
Showing 1 to 10 of 81 entries
| Ontology term | p-value | n |
|---|---|---|
| ovarian cancer | 1.12e-14 | 14 |
| cell type benign neoplasm | 7.52e-14 | 3 |
| leiomyoma | 7.52e-14 | 3 |
| benign neoplasm | 1.68e-10 | 4 |
Showing 1 to 4 of 4 entries
