FFCP PHASE1:Hg19::chr8:11702610..11702625,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr8:11702610..11702625,+ to FFCP PHASE1:Hg19::chr8:11702610..11702625,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:11702610..11702625,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11702610..11702625,+ | |||
|id=chr8:11702610..11702625,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.88e-10!591;CL:0000144!3.50e-09!625;CL:0000723!7.67e-08!436;CL:0000057!1.01e-07!75;CL:0000048!1.39e-07!430;CL:0000012!1.83e-07!682;CL:0000548!2.16e-07!679;CL:0000004!2.16e-07!679;CL:0000255!2.16e-07!679;CL:0000034!2.42e-07!444;CL:0000055!2.58e-07!180;CL:0002194!5.20e-07!63;CL:0000576!5.20e-07!63;CL:0000040!5.20e-07!63;CL:0000559!5.20e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.98e-40;6!CL:0000840;2.53e-10;5!CL:0000135;1.04e-09;3!CL:0000388;1.04e-09;3!CL:0000473;6.62e-09;39!CL:0000234;6.62e-09;39!CL:0000511;1.04e-07;1!CL:0002625;1.04e-07;1!CL:0002581;1.04e-07;1!CL:0000216;1.04e-07;1!CL:0002616;1.04e-07;1!CL:0000990;4.94e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.98e-40,6;CL:0002194,1.08e-13,59;CL:0000576,1.08e-13,59;CL:0000040,1.08e-13,59;CL:0000559,1.08e-13,59;CL:0002009,3.54e-13,61;CL:0000839,5.05e-12,66;CL:0000557,8.20e-12,67;CL:0000766,7.57e-11,72;CL:0000840,1.70e-10,5;CL:0001029,1.70e-10,5;CL:0000135,1.26e-09,3;CL:0000388,1.26e-09,3;CL:0002616,6.97e-08,1;CL:0000511,8.51e-08,1;CL:0002625,8.51e-08,1;CL:0000216,8.51e-08,1;CL:0000473,8.61e-08,48;CL:0000234,8.61e-08,48;CL:0002581,9.72e-08,1;CL:0000990,3.81e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.43e-07!101;UBERON:0001434!1.43e-07!101;UBERON:0002204!1.67e-07!167;UBERON:0002371!2.71e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.75e-14;2!UBERON:0007846;1.04e-09;3!UBERON:0000043;1.04e-09;3!UBERON:0007845;1.04e-09;3!UBERON:0001136;1.04e-07;1!UBERON:0001343;1.04e-07;1!UBERON:0004910;1.04e-07;1!UBERON:0004813;1.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.49e-14,76;UBERON:0005406,6.20e-14,2;UBERON:0001474,8.93e-13,82;UBERON:0004765,2.07e-11,90;UBERON:0002405,5.87e-11,93;UBERON:0002390,2.89e-10,98;UBERON:0003061,2.89e-10,98;UBERON:0001434,5.22e-10,100;UBERON:0007846,1.26e-09,3;UBERON:0000043,1.26e-09,3;UBERON:0007845,1.26e-09,3;UBERON:0002193,4.49e-09,108;UBERON:0002204,5.37e-09,167;UBERON:0003081,9.05e-09,203;UBERON:0001136,8.51e-08,1;UBERON:0001343,8.51e-08,1;UBERON:0004910,8.51e-08,1;UBERON:0005154,8.51e-08,1;UBERON:0005295,8.51e-08,1;UBERON:0004813,8.51e-08,1;UBERON:0005297,8.51e-08,1;UBERON:0005294,8.51e-08,1;UBERON:0010141,8.51e-08,1;UBERON:0005891,8.51e-08,1 | |||
|phase1_expression=0.54503513781167,0,0,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79132379391939,0.971680998056939,0.515151135268373,0.290796477559129,0,0,0.697287110717054,0.411167888021826,0,0.863077176966451,0.256160706529101,0,0,0,2.70852973188684,0,0.818718450173537,0.449446968890169,0.918251677112708,0.320929027076094,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0.263504357079378,0.130979075497713,0,0,1.9472843619281,1.56716763569341,2.52620124985844,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,2.43042584364528,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.529636723252875,1.14734648299525,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,0,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0.878002283269004,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.925971025153221,0,0,0,3.69325509131096,1.63802985597466,4.7561971932393,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0,0.43596006883328,0.22001485746285,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.299918973546171,3.64871341923571,2.51128545716063,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0.154209693802656,0.532685175939381,0.164254312027618,0,0.232420756919918,0,0.802025881213139,0.184161977871793,0.34444334449382,0.182091168006717,1.04899531967539,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,1.99031692572366,0,0.578775534266688,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0.422215270595328,0.987884678879706,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0.933118762985422,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0,0,0,0.274792780205587,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.236349546921671,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.35857467866569,0,0,0,0,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0,0.339936274560377,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.568209015825267,1.0062716070103,0.889811221596536,0.228840068396924,0.30246184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| 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| ||
|short_description=p@chr8:11702610..11702625,+ | |||
}} | }} |
Latest revision as of 14:14, 31 July 2015
Short description: | p@chr8:11702610..11702625, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11702610..11702625, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.98e-40 | 6 |
monopoietic cell | 1.08e-13 | 59 |
monocyte | 1.08e-13 | 59 |
monoblast | 1.08e-13 | 59 |
promonocyte | 1.08e-13 | 59 |
macrophage dendritic cell progenitor | 3.54e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.05e-12 | 66 |
granulocyte monocyte progenitor cell | 8.20e-12 | 67 |
myeloid leukocyte | 7.57e-11 | 72 |
immature conventional dendritic cell | 1.70e-10 | 5 |
common dendritic progenitor | 1.70e-10 | 5 |
fibrocyte | 1.26e-09 | 3 |
tendon cell | 1.26e-09 | 3 |
perirenal adipocyte cell | 6.97e-08 | 1 |
androgen binding protein secreting cell | 8.51e-08 | 1 |
seminiferous tubule epithelial cell | 8.51e-08 | 1 |
Sertoli cell | 8.51e-08 | 1 |
defensive cell | 8.61e-08 | 48 |
phagocyte | 8.61e-08 | 48 |
perirenal preadipocyte | 9.72e-08 | 1 |
conventional dendritic cell | 3.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.49e-14 | 76 |
perirenal fat | 6.20e-14 | 2 |
bone element | 8.93e-13 | 82 |
skeletal element | 2.07e-11 | 90 |
immune system | 5.87e-11 | 93 |
hematopoietic system | 2.89e-10 | 98 |
blood island | 2.89e-10 | 98 |
skeletal system | 5.22e-10 | 100 |
dense regular connective tissue | 1.26e-09 | 3 |
tendon | 1.26e-09 | 3 |
regular connective tissue | 1.26e-09 | 3 |
hemolymphoid system | 4.49e-09 | 108 |
musculoskeletal system | 5.37e-09 | 167 |
lateral plate mesoderm | 9.05e-09 | 203 |
mesothelium | 8.51e-08 | 1 |
seminiferous tubule of testis | 8.51e-08 | 1 |
epithelium of male gonad | 8.51e-08 | 1 |
epithelial cord | 8.51e-08 | 1 |
sex cord | 8.51e-08 | 1 |
seminiferous tubule epithelium | 8.51e-08 | 1 |
testis sex cord | 8.51e-08 | 1 |
genital ridge | 8.51e-08 | 1 |
primitive sex cord of indifferent gonad | 8.51e-08 | 1 |
coelomic epithelium | 8.51e-08 | 1 |