FFCP PHASE1:Hg19::chr8:144875208..144875222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144875208..144875222,- | |||
|coexpression_cluster_id=C480 | |coexpression_cluster_id=C480 | ||
|description=CAGE_peak_at_chr8:144875208..144875222,- | |description=CAGE_peak_at_chr8:144875208..144875222,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!4.37e-19!9 | |ontology_enrichment_celltype=CL:0000188!4.37e-19!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.01e-50;9!CL:0002575;1.15e-15;2!CL:0000632;8.17e-11;3!CL:0000594;1.04e-10;3!CL:0000669;1.70e-08;4 | |ontology_enrichment_celltype_v019=CL:0000188;3.01e-50;9!CL:0002575;1.15e-15;2!CL:0000632;8.17e-11;3!CL:0000594;1.04e-10;3!CL:0000669;1.70e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.83e-50,9;CL:0002575,1.15e-15,2;CL:0000632,8.17e-11,3;CL:0000594,9.90e-11,3;CL:0000187,1.03e-08,55;CL:0000669,1.70e-08,4;CL:0000680,2.77e-08,58;CL:0000056,2.77e-08,58;CL:0000355,2.77e-08,58;CL:0000393,6.76e-08,61;CL:0000211,6.76e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000355;3.24e-07;58 | |ontology_enrichment_development_v019=CL:0000355;3.24e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!2.79e-08!10;UBERON:0001042!5.06e-08!10;UBERON:0009145!5.06e-08!10;UBERON:0002370!5.14e-08!4;UBERON:0005058!5.14e-08!4;UBERON:0009113!5.14e-08!4;UBERON:0003295!5.14e-08!4;UBERON:0005562!5.14e-08!4;UBERON:0004177!1.51e-07!7;UBERON:0006562!2.91e-07!11;UBERON:0001134!7.34e-07!61;UBERON:0002036!7.34e-07!61;UBERON:0003082!7.34e-07!61 | |ontology_enrichment_uberon=UBERON:0000974!2.79e-08!10;UBERON:0001042!5.06e-08!10;UBERON:0009145!5.06e-08!10;UBERON:0002370!5.14e-08!4;UBERON:0005058!5.14e-08!4;UBERON:0009113!5.14e-08!4;UBERON:0003295!5.14e-08!4;UBERON:0005562!5.14e-08!4;UBERON:0004177!1.51e-07!7;UBERON:0006562!2.91e-07!11;UBERON:0001134!7.34e-07!61;UBERON:0002036!7.34e-07!61;UBERON:0003082!7.34e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.48e-44;16!UBERON:0002036;4.48e-44;16!UBERON:0002385;4.02e-22;31!UBERON:0001015;4.02e-22;31!UBERON:0000383;4.02e-22;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;4.48e-44;16!UBERON:0002036;4.48e-44;16!UBERON:0002385;4.02e-22;31!UBERON:0001015;4.02e-22;31!UBERON:0000383;4.02e-22;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.02e-11,62;UBERON:0002036,1.02e-11,62;UBERON:0003082,1.02e-11,62;UBERON:0002385,2.32e-11,64;UBERON:0001015,2.32e-11,64;UBERON:0000383,2.32e-11,64;UBERON:0002329,2.85e-10,71;UBERON:0003059,2.85e-10,71;UBERON:0007282,2.85e-10,71;UBERON:0004290,2.85e-10,71;UBERON:0009618,2.85e-10,71;UBERON:0003077,3.92e-10,72;UBERON:0007285,3.92e-10,72;UBERON:0007524,5.34e-10,73;UBERON:0007503,2.24e-09,78;UBERON:0000486,7.91e-09,83;UBERON:0005256,1.47e-08,122;UBERON:0000490,4.46e-07,148 | |||
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| ||
|short_description=p@chr8:144875208..144875222,- | |short_description=p@chr8:144875208..144875222,- | ||
}} | }} |
Latest revision as of 15:58, 31 July 2015
Short description: | p@chr8:144875208..144875222, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144875208..144875222, - |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.83e-50 | 9 |
central nervous system pericyte | 1.15e-15 | 2 |
hepatic stellate cell | 8.17e-11 | 3 |
skeletal muscle satellite cell | 9.90e-11 | 3 |
muscle cell | 1.03e-08 | 55 |
pericyte cell | 1.70e-08 | 4 |
muscle precursor cell | 2.77e-08 | 58 |
myoblast | 2.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-08 | 58 |
electrically responsive cell | 6.76e-08 | 61 |
electrically active cell | 6.76e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.02e-11 | 62 |
striated muscle tissue | 1.02e-11 | 62 |
myotome | 1.02e-11 | 62 |
muscle tissue | 2.32e-11 | 64 |
musculature | 2.32e-11 | 64 |
musculature of body | 2.32e-11 | 64 |
somite | 2.85e-10 | 71 |
presomitic mesoderm | 2.85e-10 | 71 |
presumptive segmental plate | 2.85e-10 | 71 |
dermomyotome | 2.85e-10 | 71 |
trunk paraxial mesoderm | 2.85e-10 | 71 |
paraxial mesoderm | 3.92e-10 | 72 |
presumptive paraxial mesoderm | 3.92e-10 | 72 |
dense mesenchyme tissue | 5.34e-10 | 73 |
epithelial vesicle | 2.24e-09 | 78 |
multilaminar epithelium | 7.91e-09 | 83 |
trunk mesenchyme | 1.47e-08 | 122 |
unilaminar epithelium | 4.46e-07 | 148 |