FFCP PHASE1:Mm9::chr8:47824807..47824868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=821 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000126988,uc009lqn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000126988,uc009lqn.1_5end | ||
|cluster_id=chr8:47824807..47824868,- | |||
|description=CAGE_peak_1_at_ENSMUST00000126988_5end,CAGE_peak_1_at_uc009lqn.1_5end | |description=CAGE_peak_1_at_ENSMUST00000126988_5end,CAGE_peak_1_at_uc009lqn.1_5end | ||
|id=chr8:47824807..47824868,- | |id=chr8:47824807..47824868,- | ||
|ontology_enrichment_celltype=CL:0002031!2.14e-09!25;CL:0000838!4.76e-08!12;CL:0002320!7.61e-08!46;CL:0000134!7.61e-08!46;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000063!1.70e-07!66;CL:0000084!2.26e-07!11;CL:0000827!2.26e-07!11 | |ontology_enrichment_celltype=CL:0002031!2.14e-09!25;CL:0000838!4.76e-08!12;CL:0002320!7.61e-08!46;CL:0000134!7.61e-08!46;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000063!1.70e-07!66;CL:0000084!2.26e-07!11;CL:0000827!2.26e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.93e-10,25;CL:0000838,1.42e-08,12;CL:0002320,2.59e-08,46;CL:0000134,2.59e-08,46;CL:0000988,2.65e-08,32;CL:0002032,2.65e-08,32;CL:0000037,2.65e-08,32;CL:0000837,2.65e-08,32;CL:0000084,7.64e-08,11;CL:0000827,7.64e-08,11;CL:0000542,2.24e-07,13;CL:0000051,2.24e-07,13;CL:0000738,4.65e-07,17;CL:0002087,4.65e-07,17;CL:0000791,6.53e-07,9;CL:0000789,6.53e-07,9;CL:0002420,6.53e-07,9;CL:0002419,6.53e-07,9;CL:0000790,6.53e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-16!130;UBERON:0000925!1.66e-16!130;UBERON:0006595!1.66e-16!130;UBERON:0001007!4.29e-16!128;UBERON:0001555!4.29e-16!128;UBERON:0007026!4.29e-16!128;UBERON:0004921!1.94e-15!126;UBERON:0004185!1.94e-15!126;UBERON:0002405!5.00e-15!70;UBERON:0005911!7.01e-13!69;UBERON:0002193!2.43e-12!48;UBERON:0000077!1.57e-11!97;UBERON:0002390!3.76e-11!45;UBERON:0003061!3.76e-11!45;UBERON:0000490!1.51e-10!66;UBERON:0001041!1.52e-10!92;UBERON:0005057!1.63e-10!51;UBERON:0003929!4.11e-10!55;UBERON:0003104!2.82e-09!131;UBERON:0009142!2.82e-09!131;UBERON:0004177!3.15e-08!29;UBERON:0000926!6.65e-08!193;UBERON:0004120!6.65e-08!193;UBERON:0006603!6.65e-08!193;UBERON:0001004!7.42e-08!42;UBERON:0002384!7.61e-08!46;UBERON:0003081!8.06e-08!88;UBERON:0000065!1.84e-07!41 | |ontology_enrichment_uberon=UBERON:0004119!1.66e-16!130;UBERON:0000925!1.66e-16!130;UBERON:0006595!1.66e-16!130;UBERON:0001007!4.29e-16!128;UBERON:0001555!4.29e-16!128;UBERON:0007026!4.29e-16!128;UBERON:0004921!1.94e-15!126;UBERON:0004185!1.94e-15!126;UBERON:0002405!5.00e-15!70;UBERON:0005911!7.01e-13!69;UBERON:0002193!2.43e-12!48;UBERON:0000077!1.57e-11!97;UBERON:0002390!3.76e-11!45;UBERON:0003061!3.76e-11!45;UBERON:0000490!1.51e-10!66;UBERON:0001041!1.52e-10!92;UBERON:0005057!1.63e-10!51;UBERON:0003929!4.11e-10!55;UBERON:0003104!2.82e-09!131;UBERON:0009142!2.82e-09!131;UBERON:0004177!3.15e-08!29;UBERON:0000926!6.65e-08!193;UBERON:0004120!6.65e-08!193;UBERON:0006603!6.65e-08!193;UBERON:0001004!7.42e-08!42;UBERON:0002384!7.61e-08!46;UBERON:0003081!8.06e-08!88;UBERON:0000065!1.84e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-17,118;UBERON:0000925,1.39e-17,118;UBERON:0006595,1.39e-17,118;UBERON:0001007,3.75e-17,116;UBERON:0001555,3.75e-17,116;UBERON:0007026,3.75e-17,116;UBERON:0004921,1.88e-16,114;UBERON:0005911,1.50e-13,69;UBERON:0002193,2.78e-13,48;UBERON:0002405,2.78e-13,48;UBERON:0002390,5.39e-12,45;UBERON:0003061,5.39e-12,45;UBERON:0001041,2.11e-11,80;UBERON:0000490,9.03e-11,66;UBERON:0000077,1.60e-10,35;UBERON:0003929,2.25e-10,55;UBERON:0004177,3.95e-09,29;UBERON:0005057,3.95e-09,29;UBERON:0001004,8.36e-09,42;UBERON:0000065,2.28e-08,41;UBERON:0002384,2.59e-08,46;UBERON:0003408,2.69e-07,24;UBERON:0003081,2.80e-07,87;UBERON:0002370,7.66e-07,23;UBERON:0000974,7.66e-07,23;UBERON:0004807,7.66e-07,23;UBERON:0005058,7.66e-07,23;UBERON:0003351,7.66e-07,23;UBERON:0009113,7.66e-07,23;UBERON:0003295,7.66e-07,23;UBERON:0009722,7.66e-07,23;UBERON:0005562,7.66e-07,23;UBERON:0007690,7.66e-07,23;UBERON:0004923,8.49e-07,24;UBERON:0006562,8.83e-07,24;UBERON:0001557,8.83e-07,24;UBERON:0001042,8.83e-07,24;UBERON:0008814,8.83e-07,24;UBERON:0009145,8.83e-07,24 | |||
|phase1_expression=1.44133962394315,3.83872948403297,1.36499771816861,3.32710632437513,2.50447864973174,2.68606835059024,1.40167584357315,8.26389270026088,4.22366166455,6.31974221069382,6.67750076079469,6.30200056063158,7.19043065711064,5.59490575481583,4.66353666541928,3.23960427823721,2.79824751251259,16.2463015159492,19.4702495720149,7.21462408056651,0.935476191661768,3.87234709683453,5.22399578277871,3.19984845586813,2.98232065387321,2.29692785646008,2.58457197695445,1.939241094173,3.6104449696711,5.29263272495855,2.43903561720835,5.08024538767705,1.23012957516914,0,2.88851619751275,1.66234645358492,3.67504841272264,6.69650609179052,6.2506827561904,8.37637990358077,4.1176204162171,13.6609096991689,9.22469670759192,1.38486499773135,1.62203089951223,0.734187008646726,1.56478268869608,0.436050312760893,0.878744730937887,2.13872888981712,1.53985063787899,1.43752564364972,14.0937389088499,10.1550699881588,5.04140698713696,1.02903774414379,2.57880095944881,1.54701627683233,0.202316460859598,0,0.633831403506179,1.0165335962074,0.889294796111139,3.1496490104849,1.97773272513395,6.3943210345149,0.599200221036809,1.15265491596466,0.103689612308478,0.270011876663381,0,0.856952953211411,0.662605622854841,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0.832988126665025,0.604572480854284,5.79728977403356,8.60423876981386,1.3599426674155,0.539703191637817,2.59910566979068,1.34408066129201,2.24711072210803,1.1930122580464,1.29893002301434,1.41335829804136,0.281686839553361,3.84979432242953,0,0,1.73192832808971,0.506719730950197,0.505524445014783,2.39786147410026,20.4560928081266,1.48442139064825,0.693941307064543,0,0.922461989024234,1.50722640552623,1.29347577849275,1.63366568728578,1.73036477414062,3.18118585223806,3.5384422077995,0.323533699894818,3.5334642953663,2.90925151881133,1.86391761218122,0.292780797011547,0.628340120440365,3.0654846625031,2.27648736561249,1.19980546198682,2.54140454146129,0.748953197024114,0,0.251308704225729,0.173824320192276,0.767146371990992,0.20778804455956,0.648965052271031,1.12023300235348,3.11017426525233,2.0217820674694,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.12811372028485,0.0937017245597288,1.81092359517311,0.215567992932842,0,0.527853372491847,0.876782929710299,0.556094498451196,2.089512999133,1.23469281844766,0.59710280045548,0.702213187313235,1.54408744268829,1.13665399758237,0.828503090142008,0.703578179943289,0.540186184383045,0.23674473558521,0.196764231747404,0.771335564436891,1.39520366850245,0.536546802799238,1.75148013550754,0.822799249567402,0.656669856316381,1.54030738137126,1.90059983652932,2.63460138349261,1.74468344388483,0.210289948564127,0.102904612379284,2.31293148088659,1.85115396664481,0,0.464473343720877,1.67527699718721,2.42020229548011,0.889512175379481,1.90225626112559,2.84717436926707,2.14108641141214,2.01068167040216,1.98956472041151,1.9496408711912,1.79763881730844,2.59365659849633,2.19055400579804,0.189667900953082,0.228497025219458,1.1270773567308,0,0.581857461502877,1.1221731182451,1.07502113111237,0.147610147979602,0.627994911365499,0.863780147452604,5.03969466048153,2.00214126859313,1.76903095601883,0.899448449539415,0.608580364165509,0.964708639009667,1.52775511068852,4.02774592431135,3.08056930872567,1.37280706594041,10.0637744569148,4.09355042435354,3.12037673114561,2.27320990152401,2.51156378930677,5.30687873499704,6.65111484599777,0.189491411770485,0.325929952884052,1.35796068620151,1.87752198630802,3.01511263395268,3.57065461329021,5.65887578787617,3.62560831444239,4.20782910332672,2.55127629851979,4.58817281204066,6.90739927463582,6.50920763616802,4.52373851817817,6.52686820582452,3.93411418415229,3.31124095565679,0.481651769963376,0.468846746368813,0.655739781506702,1.26235463602186,1.57754109708128,0.390438744296638,1.07711698866399,1.19484398976276,0.445597348164788,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,0.642642632843614,2.2710413633323,0.35613120733451,0.81443479676788,1.97964147567043,3.98235415019888,0.485561272309963,0.604647113929502,0.943025398779491,0.885905678642318,2.15204603560749,3.10113951801865,0.727067458955011,1.42598951353889,3.47640433729398,2.10837217149998,0,4.76615448055303,0.18006109403131,0.129358683782755,0,0.886701168211368,0.891844088010353,0.329098041204242,2.74018454203139,2.3467170806371,2.1183207086382,2.8668691747145,3.46261131177108,1.61464426695906,0.904693873922338,1.07435109602823,0.656563598980245,2.33184669303881,0.370850604021019,5.80960994712699,1.857481811669,2.96311243791539,3.20226376907975,6.83471138605126,8.92234875505438,3.39956859987711,2.93898049879682,2.21119958087078,0.954670618015114,0.316335993581135,0.813277868507395,1.29606408986162,1.25452977608681,0.655087691238533,2.02296519577231,1.65306911450672,1.30877970992015,3.24037433229482,4.34937519160848,0,0,0,0.583353565032143,0.258319646955462,0.16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| 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| ||
|short_description=p1@ENSMUST00000126988,p1@uc009lqn.1 | |short_description=p1@ENSMUST00000126988,p1@uc009lqn.1 | ||
}} | }} |
Latest revision as of 21:06, 3 August 2015
Short description: | p1@ENSMUST00000126988, p1@uc009lqn.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000126988_5end, CAGE_peak_1_at_uc009lqn.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:821 |
Association with transcript: | 0bp_to_ENSMUST00000126988, uc009lqn.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.93e-10 | 25 |
lymphoid lineage restricted progenitor cell | 1.42e-08 | 12 |
connective tissue cell | 2.59e-08 | 46 |
mesenchymal cell | 2.59e-08 | 46 |
hematopoietic cell | 2.65e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.65e-08 | 32 |
hematopoietic stem cell | 2.65e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.65e-08 | 32 |
T cell | 7.64e-08 | 11 |
pro-T cell | 7.64e-08 | 11 |
lymphocyte | 2.24e-07 | 13 |
common lymphoid progenitor | 2.24e-07 | 13 |
leukocyte | 4.65e-07 | 17 |
nongranular leukocyte | 4.65e-07 | 17 |
mature alpha-beta T cell | 6.53e-07 | 9 |
alpha-beta T cell | 6.53e-07 | 9 |
immature T cell | 6.53e-07 | 9 |
mature T cell | 6.53e-07 | 9 |
immature alpha-beta T cell | 6.53e-07 | 9 |