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FFCP PHASE1:Mm9::chr3:88425024..88425052,+: Difference between revisions

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{{FFCP|EntrezGene=16800|HGNC=|UniProt=Q60875|association_with_transcript=0bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end|description=CAGE_peak_3_at_Arhgef2_5end|id=chr3:88425024..88425052,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.49e-14!45;UBERON:0003061!1.49e-14!45;UBERON:0002193!4.95e-14!48;UBERON:0001004!2.39e-12!42;UBERON:0000065!8.05e-12!41;UBERON:0003081!1.52e-11!88;UBERON:0000072!2.37e-10!27;UBERON:0003408!3.22e-10!24;UBERON:0004177!5.04e-10!29;UBERON:0002370!1.11e-09!23;UBERON:0000974!1.11e-09!23;UBERON:0004807!1.11e-09!23;UBERON:0005058!1.11e-09!23;UBERON:0003351!1.11e-09!23;UBERON:0009113!1.11e-09!23;UBERON:0003295!1.11e-09!23;UBERON:0009722!1.11e-09!23;UBERON:0005562!1.11e-09!23;UBERON:0007690!1.11e-09!23;UBERON:0006562!3.86e-09!24;UBERON:0001557!3.86e-09!24;UBERON:0001042!3.86e-09!24;UBERON:0008814!3.86e-09!24;UBERON:0009145!3.86e-09!24;UBERON:0000063!7.68e-09!35|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-14,45;UBERON:0003061,1.40e-14,45;UBERON:0002193,4.66e-14,48;UBERON:0002405,4.66e-14,48;UBERON:0001004,2.25e-12,42;UBERON:0000065,7.59e-12,41;UBERON:0003081,3.64e-11,87;UBERON:0000072,2.22e-10,27;UBERON:0000077,2.87e-10,35;UBERON:0003408,3.01e-10,24;UBERON:0004177,4.73e-10,29;UBERON:0005057,4.73e-10,29;UBERON:0002370,1.04e-09,23;UBERON:0000974,1.04e-09,23;UBERON:0004807,1.04e-09,23;UBERON:0005058,1.04e-09,23;UBERON:0003351,1.04e-09,23;UBERON:0009113,1.04e-09,23;UBERON:0003295,1.04e-09,23;UBERON:0009722,1.04e-09,23;UBERON:0005562,1.04e-09,23;UBERON:0007690,1.04e-09,23;UBERON:0006562,3.62e-09,24;UBERON:0001557,3.62e-09,24;UBERON:0001042,3.62e-09,24;UBERON:0008814,3.62e-09,24;UBERON:0009145,3.62e-09,24|phase1_expression=2.88267924788629,1.04692622291808,1.36499771816861,0,0,3.52546471014969,4.43864017131499,9.29687928779349,7.74337971834167,9.12851652655775,8.56089841127525,10.9287857823611,13.8672591244277,12.7633787531736,5.3297561890506,4.656931149966,4.19737126876888,10.567982539501,8.5010948835558,8.48779303596061,5.27268398936633,4.96454756004426,3.13439746966722,1.75991665072747,4.81759490241057,2.29692785646008,0.430761996159075,3.66301095566011,0.570070258369122,2.26827116783938,1.55211357458713,4.44521471421742,5.53558308826113,0,1.1554064790051,1.82858109894342,1.42918549383658,11.3003540298965,8.5946887897618,11.5175223674236,15.2940186888064,30.0540013381716,14.0798002379035,3.02152363141385,2.63580021170738,4.40512205188036,4.69434806608824,3.92445281484804,3.51497892375155,3.69416808241138,4.89952475688769,4.31257693094915,7.21465206048266,3.62681071005672,8.73843877770406,1.54355661621568,2.0057340795713,2.57836046138721,6.27181028664753,4.7609188134483,3.80298842103708,3.04960078862219,3.55717918444456,5.84934816232909,8.89979726310277,11.3676818391376,6.2916023208865,6.53171119046643,13.5833392124106,13.3655878948374,14.302097371894,3.99911378165325,1.76694832761291,14.6988959057945,15.7186572469908,14.7075005857603,4.40463523997555,4.97980618532232,4.76180253094355,5.53922408466814,4.66586982372289,2.6045668527838,3.62937898701795,5.06486349028512,3.97275444219706,2.65165726926301,3.13217697758026,3.72798891650601,6.51245262665383,9.14415877292105,12.4641730141721,3.44169550792555,0,0,0,0.896053774194671,1.96622188184453,4.60161870960756,4.1565760736459,4.94675404314476,1.97180787687353,10.2661181931454,17.8363667794652,0,7.79367747640371,8.10751569520315,7.58286667522175,2.39786147410026,8.2860122767095,3.26572705942614,5.20455980298408,1.82679286987285,2.53677046981664,2.26083960828934,3.88042733547826,2.76466500925286,1.73036477414062,3.32578520915797,4.42305275974937,4.52947179852746,3.5334642953663,4.84875253135222,3.72783522436244,5.27005434620785,8.3778682725382,1.78819938646014,7.90779821739074,4.19931911695385,3.55796635804581,4.19413790333504,5.49000723382352,11.3088916901578,3.12883776346098,2.55715457330331,4.1557608911912,3.89379031362618,3.7680564624617,5.10068579501381,3.28539585963777,2.31486041475121,2.60240885925407,2.5289231487682,4.68161537493908,3.16480117455002,3.12967896096108,3.58718416797579,3.74806898238915,1.55222022443409,4.74249584452253,6.42960672570586,6.15828934573821,4.3839146485515,4.44875598760957,4.179025998266,4.93877127379064,2.58744546864041,5.61770549850588,6.94839349209731,6.25159698670304,4.76389276831654,3.28336483973535,5.04173772090842,4.49814997611899,7.08351234290654,7.40482141859416,6.0458825635106,7.24338183778972,4.78737903705395,8.88623189532794,4.43252153013557,5.18840381093477,5.70179950958796,6.36695334344047,4.83143107537338,2.10289948564127,6.48299057989492,0.660837565967596,1.05780226665418,4.90562976231038,5.57368012465052,4.63922860759536,5.64713868945359,3.55804870151792,2.85338439168839,1.89811624617805,3.12928013975621,3.01602250560323,0.795825888164603,1.16978452271472,2.69645822596266,2.16138049874694,1.7922714592893,3.41402221715547,4.22719496655997,3.3812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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16800
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q60875
|association_with_transcript=0bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end
|cluster_id=chr3:88425024..88425052,+
|description=CAGE_peak_3_at_Arhgef2_5end
|id=chr3:88425024..88425052,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!1.49e-14!45;UBERON:0003061!1.49e-14!45;UBERON:0002193!4.95e-14!48;UBERON:0001004!2.39e-12!42;UBERON:0000065!8.05e-12!41;UBERON:0003081!1.52e-11!88;UBERON:0000072!2.37e-10!27;UBERON:0003408!3.22e-10!24;UBERON:0004177!5.04e-10!29;UBERON:0002370!1.11e-09!23;UBERON:0000974!1.11e-09!23;UBERON:0004807!1.11e-09!23;UBERON:0005058!1.11e-09!23;UBERON:0003351!1.11e-09!23;UBERON:0009113!1.11e-09!23;UBERON:0003295!1.11e-09!23;UBERON:0009722!1.11e-09!23;UBERON:0005562!1.11e-09!23;UBERON:0007690!1.11e-09!23;UBERON:0006562!3.86e-09!24;UBERON:0001557!3.86e-09!24;UBERON:0001042!3.86e-09!24;UBERON:0008814!3.86e-09!24;UBERON:0009145!3.86e-09!24;UBERON:0000063!7.68e-09!35
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-14,45;UBERON:0003061,1.40e-14,45;UBERON:0002193,4.66e-14,48;UBERON:0002405,4.66e-14,48;UBERON:0001004,2.25e-12,42;UBERON:0000065,7.59e-12,41;UBERON:0003081,3.64e-11,87;UBERON:0000072,2.22e-10,27;UBERON:0000077,2.87e-10,35;UBERON:0003408,3.01e-10,24;UBERON:0004177,4.73e-10,29;UBERON:0005057,4.73e-10,29;UBERON:0002370,1.04e-09,23;UBERON:0000974,1.04e-09,23;UBERON:0004807,1.04e-09,23;UBERON:0005058,1.04e-09,23;UBERON:0003351,1.04e-09,23;UBERON:0009113,1.04e-09,23;UBERON:0003295,1.04e-09,23;UBERON:0009722,1.04e-09,23;UBERON:0005562,1.04e-09,23;UBERON:0007690,1.04e-09,23;UBERON:0006562,3.62e-09,24;UBERON:0001557,3.62e-09,24;UBERON:0001042,3.62e-09,24;UBERON:0008814,3.62e-09,24;UBERON:0009145,3.62e-09,24
|phase1_expression=2.88267924788629,1.04692622291808,1.36499771816861,0,0,3.52546471014969,4.43864017131499,9.29687928779349,7.74337971834167,9.12851652655775,8.56089841127525,10.9287857823611,13.8672591244277,12.7633787531736,5.3297561890506,4.656931149966,4.19737126876888,10.567982539501,8.5010948835558,8.48779303596061,5.27268398936633,4.96454756004426,3.13439746966722,1.75991665072747,4.81759490241057,2.29692785646008,0.430761996159075,3.66301095566011,0.570070258369122,2.26827116783938,1.55211357458713,4.44521471421742,5.53558308826113,0,1.1554064790051,1.82858109894342,1.42918549383658,11.3003540298965,8.5946887897618,11.5175223674236,15.2940186888064,30.0540013381716,14.0798002379035,3.02152363141385,2.63580021170738,4.40512205188036,4.69434806608824,3.92445281484804,3.51497892375155,3.69416808241138,4.89952475688769,4.31257693094915,7.21465206048266,3.62681071005672,8.73843877770406,1.54355661621568,2.0057340795713,2.57836046138721,6.27181028664753,4.7609188134483,3.80298842103708,3.04960078862219,3.55717918444456,5.84934816232909,8.89979726310277,11.3676818391376,6.2916023208865,6.53171119046643,13.5833392124106,13.3655878948374,14.302097371894,3.99911378165325,1.76694832761291,14.6988959057945,15.7186572469908,14.7075005857603,4.40463523997555,4.97980618532232,4.76180253094355,5.53922408466814,4.66586982372289,2.6045668527838,3.62937898701795,5.06486349028512,3.97275444219706,2.65165726926301,3.13217697758026,3.72798891650601,6.51245262665383,9.14415877292105,12.4641730141721,3.44169550792555,0,0,0,0.896053774194671,1.96622188184453,4.60161870960756,4.1565760736459,4.94675404314476,1.97180787687353,10.2661181931454,17.8363667794652,0,7.79367747640371,8.10751569520315,7.58286667522175,2.39786147410026,8.2860122767095,3.26572705942614,5.20455980298408,1.82679286987285,2.53677046981664,2.26083960828934,3.88042733547826,2.76466500925286,1.73036477414062,3.32578520915797,4.42305275974937,4.52947179852746,3.5334642953663,4.84875253135222,3.72783522436244,5.27005434620785,8.3778682725382,1.78819938646014,7.90779821739074,4.19931911695385,3.55796635804581,4.19413790333504,5.49000723382352,11.3088916901578,3.12883776346098,2.55715457330331,4.1557608911912,3.89379031362618,3.7680564624617,5.10068579501381,3.28539585963777,2.31486041475121,2.60240885925407,2.5289231487682,4.68161537493908,3.16480117455002,3.12967896096108,3.58718416797579,3.74806898238915,1.55222022443409,4.74249584452253,6.42960672570586,6.15828934573821,4.3839146485515,4.44875598760957,4.179025998266,4.93877127379064,2.58744546864041,5.61770549850588,6.94839349209731,6.25159698670304,4.76389276831654,3.28336483973535,5.04173772090842,4.49814997611899,7.08351234290654,7.40482141859416,6.0458825635106,7.24338183778972,4.78737903705395,8.88623189532794,4.43252153013557,5.18840381093477,5.70179950958796,6.36695334344047,4.83143107537338,2.10289948564127,6.48299057989492,0.660837565967596,1.05780226665418,4.90562976231038,5.57368012465052,4.63922860759536,5.64713868945359,3.55804870151792,2.85338439168839,1.89811624617805,3.12928013975621,3.01602250560323,0.795825888164603,1.16978452271472,2.69645822596266,2.16138049874694,1.7922714592893,3.41402221715547,4.22719496655997,3.38123207019241,2.64746726198909,5.62462212786115,4.48869247298039,6.13394410105296,4.72352473534727,8.00693511991011,4.93588655687202,0.592905254174298,2.16898637430922,2.75182593158484,2.02375901146368,2.43432145666204,2.65294875727659,2.03700681425136,3.16465751195892,1.78348749452539,1.92192989231657,5.75072826109418,1.48856379067401,1.87222603868736,1.01031551178845,0.896987067609561,0,5.72734889516475,3.41084541186873,5.70377417547091,4.2436271443797,4.92849521405854,5.19269398069629,4.28478553594825,6.24427673144956,5.2019597555043,5.75808193086815,9.24837658213425,7.86543910635542,7.7708241839653,7.37710198765709,7.53956419696361,7.61467957346193,2.95058563811422,2.48343071674259,3.53211297973142,5.86058432961016,3.11476396215683,3.53459298086122,5.04813151066011,5.46614242015294,6.67812532971677,4.30143836314594,4.67877215573028,7.07691326972081,5.26253912177363,3.79932615284705,5.53402889125133,7.71171159412337,4.5420827266646,3.91744328067962,5.53815661802159,5.93892442701128,0,3.15614827001476,5.44182402536552,0.943025398779491,3.54362271456927,2.76691633149535,3.10113951801865,2.18120237686503,4.63446591900138,3.79244109522979,2.10837217149998,2.06271086496374,1.70219802876894,3.42116078659489,4.65691261617916,3.64372959553707,3.72414490648775,3.21063871683727,2.96188237083818,2.13125464380219,5.16277757740163,6.77862626764225,0.882113592219848,3.79238381765404,4.68246837418126,4.22190474497091,4.05865969610664,3.77524069413641,1.45740418314925,4.07935664423121,4.44264290074417,5.98521917093345,4.8150577116125,5.46268525313604,6.15124024744613,5.94823250336959,6.79913719975421,7.83728133012485,7.87739850685216,6.68269432610579,4.9032079005076,3.04979200690273,4.10420295122845,5.43629569637619,3.27543845619266,4.31565908431426,6.36431609085087,7.0674104335688,1.16653475962614,9.32008969630389,0,3.13984746692355,1.98550188548517,5.83353565032143,4.26227417476513,3.21016638432478,2.46450201156083,3.1249052362548,2.41176492179135,1.44950472495604,0.864090018773596,6.63623353319174,6.48720688928525,4.5192821152524,6.75588279484534,5.01274747868948,9.33802367471945,9.13485416351763,9.15675068482379,9.08698049533329,8.68757595866998,9.88096614341037,9.94070383545475,12.3151157299622,10.4020442941596,3.62768613784338,2.44184548711471,3.13998498133165,2.68615386182526,8.30715254338419,3.56596703357246,5.86085197655248,4.71610433973945,0.501572104035363,1.12950368523413,1.38097570952153,1.14579102687879,3.09335728218638,1.37016503954128,1.5107877947794,2.02506750069542,2.70192721934532,3.17199686288943,1.03552062350364,3.1136204275253,3.99024873401031,5.12200817262403,4.132814190161,4.40187641518763,4.59608771125035,5.11167473943715,3.7086310303001,3.85103051510178,5.55933865880354,2.28131369901216,5.47016390019621,5.89941497060259,6.72264100251127,3.84817642002609,6.19181798667996,5.09891034157364,8.29509647993932,4.94503080963968,3.67997300335993,6.17164654293748,4.2594193478241,4.76872379894642,4.94177816549917,5.64656282491984,4.14611578669215,4.93905526756486,3.94604567156764,4.6173398707593,3.36685362994643,3.91495559809775,4.82671963640261,7.7753898202241,5.88759996506671,3.47231899766054,6.99469618226249,4.21076895201735,3.22306581072447,4.59091996965224,2.8676884485537,5.10109238364927
|short_description=p3@Arhgef2
}}

Revision as of 04:16, 4 August 2015

Short description:p3@Arhgef2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgef2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029694, NM_008487, uc008pvw.2, uc008pvx.2_5end
EntrezGene:16800
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arhgef2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D96.51
Mouse Schwann, donor2.CNhs12573.11746-123F99.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I28.89
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I65.70
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H14.94
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C77.77
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.88
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G49.34
thymus, neonate N02.CNhs11181.1541-43F89.13
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D38.69
thymus, neonate N10.CNhs11194.748-24E49.88
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G712.32
thymus, neonate N30.CNhs11132.1393-42G210.40
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system1.40e-1445
blood island1.40e-1445
hemolymphoid system4.66e-1448
immune system4.66e-1448
respiratory system2.25e-1242
respiratory tract7.59e-1241
lateral plate mesoderm3.64e-1187
segment of respiratory tract2.22e-1027
mixed endoderm/mesoderm-derived structure2.87e-1035
gland of gut3.01e-1024
hemopoietic organ4.73e-1029
immune organ4.73e-1029
thymus1.04e-0923
neck1.04e-0923
respiratory system epithelium1.04e-0923
hemolymphoid system gland1.04e-0923
pharyngeal epithelium1.04e-0923
thymic region1.04e-0923
pharyngeal gland1.04e-0923
entire pharyngeal arch endoderm1.04e-0923
thymus primordium1.04e-0923
early pharyngeal endoderm1.04e-0923
pharynx3.62e-0924
upper respiratory tract3.62e-0924
chordate pharynx3.62e-0924
pharyngeal arch system3.62e-0924
pharyngeal region of foregut3.62e-0924
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