FFCP PHASE1:Mm9::chr19:46764392..46764433,+: Difference between revisions
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{{FFCP|EntrezGene=66439|HGNC=|MCL_coexpression_id=1|UniProt=Q9CRC6|association_with_transcript=0bp_to_ENSMUST00000074912,NM_025563,uc008hub.1_5end|description=CAGE_peak_1_at_2010012O05Rik_5end|id=chr19:46764392..46764433,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.31e-09!122;UBERON:0000033!2.27e-09!63;UBERON:0001049!3.08e-09!52;UBERON:0005068!3.08e-09!52;UBERON:0006241!3.08e-09!52;UBERON:0007135!3.08e-09!52;UBERON:0000025!9.35e-09!114;UBERON:0000955!1.10e-08!50;UBERON:0006238!1.10e-08!50;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002616!3.43e-08!49;UBERON:0002021!3.92e-07!10;UBERON:0000411!3.92e-07!10;UBERON:0001950!3.92e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.43e-12,92;UBERON:0000073,6.28e-10,54;UBERON:0004111,1.31e-09,122;UBERON:0001049,3.08e-09,52;UBERON:0005068,3.08e-09,52;UBERON:0006241,3.08e-09,52;UBERON:0007135,3.08e-09,52;UBERON:0000025,9.35e-09,114;UBERON:0002346,4.12e-08,64;UBERON:0003075,4.12e-08,64;UBERON:0007284,4.12e-08,64;UBERON:0000955,1.57e-07,47;UBERON:0006238,1.57e-07,47;UBERON:0002021,3.92e-07,10;UBERON:0000411,3.92e-07,10;UBERON:0001950,3.92e-07,10;UBERON:0002616,4.64e-07,46|phase1_expression=15.6945870162698,11.8651638597383,9.55498402718026,8.77146212789807,9.01612313903425,8.72972213941827,11.9142446703718,8.52213934714403,3.37892933164,4.91535505276186,8.73211637950075,7.0199499915896,5.9920255475922,7.16847299835779,7.99463428357591,8.70643649776252,8.39474253753776,20.5050407482854,15.9052742982657,16.1268067683251,15.3928355173436,13.8014422169231,12.015190300391,13.4393635146462,14.6821939882989,10.3361753540704,6.46142994238612,6.03319451520489,15.3918969759663,13.8616571367962,9.97787297948871,3.81018404075779,3.69038872550742,0,8.08784535303569,7.14808975041517,9.18762103180661,5.02237956884289,14.0640362014284,3.14114246384279,2.94115744015507,3.41522742479223,3.39857247121808,13.09326906946,13.3817549209759,9.36088436024576,7.82391344348039,11.9913836009246,10.1055644057857,12.0546537426056,12.8787507895334,11.5002051491977,11.7447824240415,6.5282592781021,5.04140698713696,16.4646039063006,20.057340795713,8.76642556871652,14.9714181036102,22.7466121086974,12.6766280701236,5.76035704517525,5.33576877666684,4.49949858640699,10.8775299882367,5.6838409195688,4.49400165777607,4.99483796918021,9.95420278161385,9.72042755988173,8.62332341540666,21.1381728458815,26.283356373242,8.81933754347669,9.00947427571422,6.43453150627015,17.6185409599022,31.6664598451266,30.7213066512487,16.4857859662742,19.6698433745181,16.1483144872596,30.9893128891533,32.0774687718058,36.213184723104,25.6326869362091,23.7760706934502,16.0303523409758,9.46577416664801,14.1318817399689,8.98579914975201,15.487629785665,6.79971333707751,9.17495425784289,13.6453047664011,17.0250217096988,18.2577746171277,24.3715361286623,27.2775304833012,27.5604868118065,15.0702459161048,25.6652954828636,12.7402619853323,21.3320010945999,11.9070072556168,9.62767488805375,11.62706223534,14.8439043634778,12.6879562987114,19.8912466346865,14.2257967948231,13.3964810457342,14.0675453326196,16.7302131013411,19.7549027987984,15.0799909595611,10.3821886448437,22.991297750266,10.6153266233985,16.8237523945306,16.1214308476087,14.5462575940567,27.9587641827183,23.7152445579353,24.9241581108012,11.240110429178,13.8985544426868,11.3981518888747,13.4694440697449,32.2049874720369,32.9400434029411,10.5549655774806,37.1984045211472,37.0787413128979,32.8305110404105,26.76980840618,18.3310854930569,15.7996852674818,26.2831668771022,14.7309299120532,15.2240918266363,15.4034409970427,13.8647839950119,15.2211866014072,18.6420007674638,15.373646434182,13.118241438362,23.0245999957724,14.8741915123661,11.535470890237,15.8356011747554,12.4941567483718,13.0682207136031,19.1538691587192,11.5237996388448,15.9227413454795,13.3420505589515,15.9555702411123,14.2081749697796,15.3273071676271,18.2930326785255,19.2666405763286,23.9112182941062,19.479658942993,18.5120535464854,24.8811320882936,13.1453966685813,19.1495161482158,15.1395061920402,21.6701052584406,17.2676564332673,20.4679982395465,20.4181607220677,20.1309628140558,37.6419007929788,14.818264182617,8.59088835757875,8.99131926656051,15.1434657880016,16.953277045812,15.8506977426175,12.9077455758939,18.2349995952794,11.4135375667535,5.21981967698963,14.493508015713,16.0854533632172,16.3144307073744,11.8928093142663,14.3811105384675,12.5360068927323,13.1433240347882,15.9321036800589,16.1090402779718,16.9061603509621,15.4775009162439,14.1585315632367,14.8687938167475,14.9238227613247,11.8088118383682,17.8978549739167,13.9438795231635,19.2694207606647,12.1796927172749,9.82794975566015,9.66907083254871,7.50582449137461,7.71766911207734,9.67578236769395,8.34318798607351,12.6465476884528,12.9043864198398,20.1275489138296,13.3970741160661,13.1055822708115,13.8918382870911,12.0196267059681,27.4992807177119,16.4430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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66439 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CRC6 | |||
|association_with_transcript=0bp_to_ENSMUST00000074912,NM_025563,uc008hub.1_5end | |||
|cluster_id=chr19:46764392..46764433,+ | |||
|description=CAGE_peak_1_at_2010012O05Rik_5end | |||
|id=chr19:46764392..46764433,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.31e-09!122;UBERON:0000033!2.27e-09!63;UBERON:0001049!3.08e-09!52;UBERON:0005068!3.08e-09!52;UBERON:0006241!3.08e-09!52;UBERON:0007135!3.08e-09!52;UBERON:0000025!9.35e-09!114;UBERON:0000955!1.10e-08!50;UBERON:0006238!1.10e-08!50;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002616!3.43e-08!49;UBERON:0002021!3.92e-07!10;UBERON:0000411!3.92e-07!10;UBERON:0001950!3.92e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.43e-12,92;UBERON:0000073,6.28e-10,54;UBERON:0004111,1.31e-09,122;UBERON:0001049,3.08e-09,52;UBERON:0005068,3.08e-09,52;UBERON:0006241,3.08e-09,52;UBERON:0007135,3.08e-09,52;UBERON:0000025,9.35e-09,114;UBERON:0002346,4.12e-08,64;UBERON:0003075,4.12e-08,64;UBERON:0007284,4.12e-08,64;UBERON:0000955,1.57e-07,47;UBERON:0006238,1.57e-07,47;UBERON:0002021,3.92e-07,10;UBERON:0000411,3.92e-07,10;UBERON:0001950,3.92e-07,10;UBERON:0002616,4.64e-07,46 | |||
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| |||
|short_description=p1@2010012O05Rik | |||
}} |
Revision as of 05:59, 4 August 2015
Short description: | p1@2010012O05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010012O05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000074912, NM_025563, uc008hub.1_5end |
EntrezGene: | 66439 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.43e-12 | 92 |
regional part of nervous system | 6.28e-10 | 54 |
anatomical conduit | 1.31e-09 | 122 |
neural tube | 3.08e-09 | 52 |
neural rod | 3.08e-09 | 52 |
future spinal cord | 3.08e-09 | 52 |
neural keel | 3.08e-09 | 52 |
tube | 9.35e-09 | 114 |
neurectoderm | 4.12e-08 | 64 |
neural plate | 4.12e-08 | 64 |
presumptive neural plate | 4.12e-08 | 64 |
brain | 1.57e-07 | 47 |
future brain | 1.57e-07 | 47 |
occipital lobe | 3.92e-07 | 10 |
visual cortex | 3.92e-07 | 10 |
neocortex | 3.92e-07 | 10 |
regional part of brain | 4.64e-07 | 46 |