FFCP PHASE1:Mm9::chr8:93340958..93340978,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:93340958..93340978,-
|short_description=p@chr8:93340958..93340978,-
|description=CAGE_peak_at_chr8:93340958..93340978,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:93340958..93340978,- | |||
|description=CAGE_peak_at_chr8:93340958..93340978,- | |||
|id=chr8:93340958..93340978,- | |||
|ontology_enrichment_celltype=CL:0002453!1.51e-09!8;CL:0000333!3.11e-08!10;CL:0000095!3.11e-08!10;CL:0000243!3.11e-08!10;CL:0000123!3.11e-08!10;CL:0000125!3.11e-08!10;CL:0000030!3.11e-08!10;CL:0000339!3.11e-08!10;CL:0000221!1.07e-07!44;CL:0000133!1.07e-07!44;CL:0000128!1.74e-07!6;CL:0000126!1.74e-07!6;CL:0000127!1.74e-07!6;CL:0002319!2.40e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.44e-20,8;CL:0000333,2.99e-16,10;CL:0000095,2.99e-16,10;CL:0000243,2.99e-16,10;CL:0000123,2.99e-16,10;CL:0000125,2.99e-16,10;CL:0000030,2.99e-16,10;CL:0000339,2.99e-16,10;CL:0000128,1.88e-14,6;CL:0000126,1.88e-14,6;CL:0000127,1.88e-14,6;CL:0002319,3.55e-12,43;CL:0000221,7.82e-12,44;CL:0000133,7.82e-12,44;CL:0002614,2.49e-10,3;CL:0002610,1.91e-09,3;CL:0002321,1.36e-08,70;CL:0002605,4.37e-08,2;CL:0002604,4.37e-08,2;CL:0000878,7.44e-08,2;CL:0000129,7.44e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.69e-11!73;UBERON:0005743!2.69e-11!73;UBERON:0000073!3.28e-11!75;UBERON:0001016!3.28e-11!75;UBERON:0000955!4.56e-09!50;UBERON:0006238!4.56e-09!50;UBERON:0002616!1.13e-08!49;UBERON:0001049!1.22e-08!52;UBERON:0005068!1.22e-08!52;UBERON:0006241!1.22e-08!52;UBERON:0007135!1.22e-08!52;UBERON:0003076!8.61e-08!12;UBERON:0003057!8.61e-08!12;UBERON:0004121!5.42e-07!102;UBERON:0000924!5.42e-07!102;UBERON:0006601!5.42e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.90e-12,73;UBERON:0001016,1.57e-11,75;UBERON:0002038,2.49e-10,3;UBERON:0009663,2.49e-10,3;UBERON:0009661,2.49e-10,3;UBERON:0000125,2.49e-10,3;UBERON:0002308,2.49e-10,3;UBERON:0000073,5.03e-10,54;UBERON:0004684,1.91e-09,3;UBERON:0002275,1.91e-09,3;UBERON:0004121,2.40e-09,95;UBERON:0000924,2.40e-09,95;UBERON:0006601,2.40e-09,95;UBERON:0004733,1.90e-08,6;UBERON:0004732,1.90e-08,6;UBERON:0002028,1.90e-08,6;UBERON:0007277,1.90e-08,6;UBERON:0005153,4.77e-08,17;UBERON:0002950,7.56e-08,4;UBERON:0001891,7.56e-08,4;UBERON:0009616,7.56e-08,4;UBERON:0010286,7.56e-08,4;UBERON:0002037,1.09e-07,4;UBERON:0002680,1.09e-07,4;UBERON:0001895,1.09e-07,4;UBERON:0010092,1.09e-07,4;UBERON:0006215,1.09e-07,4;UBERON:0001954,1.61e-07,7;UBERON:0003022,1.61e-07,7;UBERON:0002421,1.61e-07,7;UBERON:0000349,1.61e-07,7;UBERON:0002600,1.61e-07,7;UBERON:0002048,1.65e-07,14;UBERON:0000117,1.65e-07,14;UBERON:0000171,1.65e-07,14;UBERON:0000170,1.65e-07,14;UBERON:0005597,1.65e-07,14;UBERON:0000118,1.65e-07,14;UBERON:0011216,5.48e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,10.0291571935005,34.2710445065776,28.1923353657711,8.9591309840232,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,6.2916023208865,16.9056054341484,0,0,0,0.285650984403804,2.65042249141936,0.122490799214954,0,0,1.10115880999389,1.65993539510744,1.99688493233117,0.131886287730194,0.365950574409639,0,1.95428099300967,6.19038871034848,2.90316670775939,0,0.427115042397309,0.186399445825301,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.521472960576829,0,0.62336413367868,0.648965052271031,0,0.622034853050465,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,1.89260953707715,1.02904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,3.32555742299888,0,0,0,0,0.502518772325447,2.14239276797412,0.975668239288994,1.10344600874334,0.664394068946325,0.478364305972461,1.80249646187312,2.41758974612254,2.31438493730419,0,0,0.491764273019036,1.10374698521893,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.37456602987953,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,10.0291571935005,34.2710445065776,28.1923353657711,8.9591309840232,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,6.2916023208865,16.9056054341484,0,0,0,0.285650984403804,2.65042249141936,0.122490799214954,0,0,1.10115880999389,1.65993539510744,1.99688493233117,0.131886287730194,0.365950574409639,0,1.95428099300967,6.19038871034848,2.90316670775939,0,0.427115042397309,0.186399445825301,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.521472960576829,0,0.62336413367868,0.648965052271031,0,0.622034853050465,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,1.89260953707715,1.02904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,3.32555742299888,0,0,0,0,0.502518772325447,2.14239276797412,0.975668239288994,1.10344600874334,0.664394068946325,0.478364305972461,1.80249646187312,2.41758974612254,2.31438493730419,0,0,0.491764273019036,1.10374698521893,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.37456602987953,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr8:93340958..93340978,- | |||
}} | }} |
Latest revision as of 08:02, 4 August 2015
Short description: | p@chr8:93340958..93340978, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:93340958..93340978, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.44e-20 | 8 |
migratory neural crest cell | 2.99e-16 | 10 |
neuron associated cell | 2.99e-16 | 10 |
glial cell (sensu Vertebrata) | 2.99e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 2.99e-16 | 10 |
glial cell | 2.99e-16 | 10 |
glioblast | 2.99e-16 | 10 |
glioblast (sensu Vertebrata) | 2.99e-16 | 10 |
oligodendrocyte | 1.88e-14 | 6 |
macroglial cell | 1.88e-14 | 6 |
astrocyte | 1.88e-14 | 6 |
neural cell | 3.55e-12 | 43 |
ectodermal cell | 7.82e-12 | 44 |
neurectodermal cell | 7.82e-12 | 44 |
neuron of the substantia nigra | 2.49e-10 | 3 |
raphe nuclei neuron | 1.91e-09 | 3 |
embryonic cell | 1.36e-08 | 70 |
astrocyte of the cerebral cortex | 4.37e-08 | 2 |
astrocyte of the hippocampus | 4.37e-08 | 2 |
central nervous system macrophage | 7.44e-08 | 2 |
microglial cell | 7.44e-08 | 2 |