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FFCP PHASE1:Mm9::chr3:95085684..95085715,-: Difference between revisions

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{{FFCP|EntrezGene=229589|HGNC=|UniProt=Q8BIW1|association_with_transcript=282bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end|description=CAGE_peak_2_at_Prune_5end|id=chr3:95085684..95085715,-|ontology_enrichment_celltype=CL:0000117!9.50e-12!23;CL:0000337!9.50e-12!23;CL:0000540!7.52e-07!33;CL:0000047!7.52e-07!33;CL:0000031!7.52e-07!33;CL:0000404!7.52e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.49e-12,23;CL:0000337,9.49e-12,23;CL:0000540,7.52e-07,33;CL:0000047,7.52e-07,33;CL:0000031,7.52e-07,33;CL:0000404,7.52e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.71e-09!73;UBERON:0005743!6.71e-09!73;UBERON:0002020!2.38e-08!34;UBERON:0000073!2.61e-08!75;UBERON:0001016!2.61e-08!75;UBERON:0001049!4.80e-08!52;UBERON:0005068!4.80e-08!52;UBERON:0006241!4.80e-08!52;UBERON:0007135!4.80e-08!52;UBERON:0000955!4.80e-07!50;UBERON:0006238!4.80e-07!50;UBERON:0002616!8.58e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.76e-09,54;UBERON:0001017,6.71e-09,73;UBERON:0002020,2.38e-08,34;UBERON:0001016,2.61e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010314,5.08e-07,92|phase1_expression=1.92178616525753,5.23463111459042,4.09499315450582,3.0246421130683,4.00716583957078,3.86122325397347,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,1.19852577757853,1.27635454392538,1.36960583944965,1.22388563386596,2.99798785634096,2.22722794128809,3.49780939064073,0.473193248037357,1.23402990245165,0,3.57181818634493,1.29078236561151,0.783599367416806,3.83981814704176,2.06468352960453,5.7423196411502,3.4460959692726,6.03319451520489,3.6104449696711,3.78045194639896,3.10422714917427,1.90509202037889,0.61506478758457,0,3.17736781726402,2.49351968037739,1.83752420636132,4.18531630736908,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,3.88408282424923,1.38486499773135,1.72340783073175,2.38610777810186,3.12956537739216,3.92445281484804,3.29529274101708,2.72201858703997,2.51975558925653,7.18762821824858,1.17447824240415,0,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,11.7343547298567,7.93486468908049,9.50747105259269,1.35537812827653,4.4464739805557,3.1496490104849,4.94433181283487,3.5524005747305,4.49400165777607,6.91592949578798,6.32506635081714,5.8052553482627,6.94072372459561,6.56997264128748,6.18431914664518,7.10446635446733,7.09256485534949,8.27296907949019,5.50579404996943,6.76742891851495,6.60508093001847,12.7929699098288,11.7104183811084,11.4600941522487,6.42120897703176,1.68828783009504,5.50073691996516,11.490514833473,9.39653093274079,8.38797506213853,1.51452386666368,3.40072020480535,2.31891590961342,2.58127163094416,1.3599426674155,4.31762553310254,3.24888208723835,2.24013443548668,6.60088774619234,1.87473354835864,1.03914401841148,4.24007489412408,2.81686839553361,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,4.22480354960522,2.84831672011889,3.26572705942614,1.90833859442749,2.74018930480927,6.91846491768175,2.86373017049983,4.35078216402108,3.01599819191221,9.64060374164058,5.35017620603673,2.65383165584962,9.54424414689714,4.63767188766826,3.39412677194655,7.45567044872489,7.02673912827713,5.02672096352292,4.34276993854605,1.43778149407104,0,1.27070227073065,5.84183493678809,3.66000482254901,6.40837195775608,5.9100268865374,6.90431734791892,4.98691306942944,4.54275536589721,2.95334155165917,3.73220911830279,3.0326731012041,3.15662783829711,3.12289063110489,1.83921683546778,2.88099407688559,3.16480117455002,3.33378845841506,3.45907044769094,3.74806898238915,2.32833033665114,4.52692785158969,3.02569728268511,3.69497360744293,5.04150184583422,1.94633074457919,3.48252166522167,2.67516777330327,4.97585667046233,1.40442637462647,1.28673953557358,1.70498099637356,5.17814431338755,3.51789089971644,4.8616756594474,5.20838418287463,5.70616272067471,5.707883176833,7.67362017676346,6.43856163359086,5.83826711835847,6.08871444679878,6.07419617092652,3.72916523910936,5.84799949701329,5.26920276698522,5.36825675041487,3.57492912559016,6.38008596751563,5.28670052774077,3.70230793328962,4.90562976231038,3.71578674976702,3.22168653305233,3.42861991859682,2.89091456998331,2.47293313946327,5.69434873853414,3.45867804920423,3.51869292320377,4.57599885694647,3.11942539390592,3.59527763461689,4.75503709724327,4.77939055810481,2.27601481143698,2.85621281524322,4.50830942692322,1.4255592949172,3.49114476901726,2.59502533594179,3.85742876457969,3.24742325555125,2.82597710114475,3.08492909804501,3.85388415213294,2.66952169145751,1.96558995113203,2.02375901146368,1.62288097110802,2.17059443777175,1.01850340712568,3.16465751195892,2.2698931748505,4.66754402419738,2.87536413054709,2.97712758134803,6.55279113540577,3.03094653536534,1.97337154874103,4.3419916922703,3.69506380333209,4.35830247072115,3.7481944581666,2.37643120085263,4.22442446919304,2.1775813467436,1.6663054862021,1.36593553500459,2.52216230569906,2.43611158613652,2.5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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:229589
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8BIW1
|association_with_transcript=282bp_to_ENSMUST00000015855,NM_173347,uc008qiz.1_5end
|cluster_id=chr3:95085684..95085715,-
|description=CAGE_peak_2_at_Prune_5end
|id=chr3:95085684..95085715,-
|ontology_enrichment_celltype=CL:0000117!9.50e-12!23;CL:0000337!9.50e-12!23;CL:0000540!7.52e-07!33;CL:0000047!7.52e-07!33;CL:0000031!7.52e-07!33;CL:0000404!7.52e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.49e-12,23;CL:0000337,9.49e-12,23;CL:0000540,7.52e-07,33;CL:0000047,7.52e-07,33;CL:0000031,7.52e-07,33;CL:0000404,7.52e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.71e-09!73;UBERON:0005743!6.71e-09!73;UBERON:0002020!2.38e-08!34;UBERON:0000073!2.61e-08!75;UBERON:0001016!2.61e-08!75;UBERON:0001049!4.80e-08!52;UBERON:0005068!4.80e-08!52;UBERON:0006241!4.80e-08!52;UBERON:0007135!4.80e-08!52;UBERON:0000955!4.80e-07!50;UBERON:0006238!4.80e-07!50;UBERON:0002616!8.58e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.76e-09,54;UBERON:0001017,6.71e-09,73;UBERON:0002020,2.38e-08,34;UBERON:0001016,2.61e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010314,5.08e-07,92
|phase1_expression=1.92178616525753,5.23463111459042,4.09499315450582,3.0246421130683,4.00716583957078,3.86122325397347,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,1.19852577757853,1.27635454392538,1.36960583944965,1.22388563386596,2.99798785634096,2.22722794128809,3.49780939064073,0.473193248037357,1.23402990245165,0,3.57181818634493,1.29078236561151,0.783599367416806,3.83981814704176,2.06468352960453,5.7423196411502,3.4460959692726,6.03319451520489,3.6104449696711,3.78045194639896,3.10422714917427,1.90509202037889,0.61506478758457,0,3.17736781726402,2.49351968037739,1.83752420636132,4.18531630736908,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,3.88408282424923,1.38486499773135,1.72340783073175,2.38610777810186,3.12956537739216,3.92445281484804,3.29529274101708,2.72201858703997,2.51975558925653,7.18762821824858,1.17447824240415,0,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,11.7343547298567,7.93486468908049,9.50747105259269,1.35537812827653,4.4464739805557,3.1496490104849,4.94433181283487,3.5524005747305,4.49400165777607,6.91592949578798,6.32506635081714,5.8052553482627,6.94072372459561,6.56997264128748,6.18431914664518,7.10446635446733,7.09256485534949,8.27296907949019,5.50579404996943,6.76742891851495,6.60508093001847,12.7929699098288,11.7104183811084,11.4600941522487,6.42120897703176,1.68828783009504,5.50073691996516,11.490514833473,9.39653093274079,8.38797506213853,1.51452386666368,3.40072020480535,2.31891590961342,2.58127163094416,1.3599426674155,4.31762553310254,3.24888208723835,2.24013443548668,6.60088774619234,1.87473354835864,1.03914401841148,4.24007489412408,2.81686839553361,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,4.22480354960522,2.84831672011889,3.26572705942614,1.90833859442749,2.74018930480927,6.91846491768175,2.86373017049983,4.35078216402108,3.01599819191221,9.64060374164058,5.35017620603673,2.65383165584962,9.54424414689714,4.63767188766826,3.39412677194655,7.45567044872489,7.02673912827713,5.02672096352292,4.34276993854605,1.43778149407104,0,1.27070227073065,5.84183493678809,3.66000482254901,6.40837195775608,5.9100268865374,6.90431734791892,4.98691306942944,4.54275536589721,2.95334155165917,3.73220911830279,3.0326731012041,3.15662783829711,3.12289063110489,1.83921683546778,2.88099407688559,3.16480117455002,3.33378845841506,3.45907044769094,3.74806898238915,2.32833033665114,4.52692785158969,3.02569728268511,3.69497360744293,5.04150184583422,1.94633074457919,3.48252166522167,2.67516777330327,4.97585667046233,1.40442637462647,1.28673953557358,1.70498099637356,5.17814431338755,3.51789089971644,4.8616756594474,5.20838418287463,5.70616272067471,5.707883176833,7.67362017676346,6.43856163359086,5.83826711835847,6.08871444679878,6.07419617092652,3.72916523910936,5.84799949701329,5.26920276698522,5.36825675041487,3.57492912559016,6.38008596751563,5.28670052774077,3.70230793328962,4.90562976231038,3.71578674976702,3.22168653305233,3.42861991859682,2.89091456998331,2.47293313946327,5.69434873853414,3.45867804920423,3.51869292320377,4.57599885694647,3.11942539390592,3.59527763461689,4.75503709724327,4.77939055810481,2.27601481143698,2.85621281524322,4.50830942692322,1.4255592949172,3.49114476901726,2.59502533594179,3.85742876457969,3.24742325555125,2.82597710114475,3.08492909804501,3.85388415213294,2.66952169145751,1.96558995113203,2.02375901146368,1.62288097110802,2.17059443777175,1.01850340712568,3.16465751195892,2.2698931748505,4.66754402419738,2.87536413054709,2.97712758134803,6.55279113540577,3.03094653536534,1.97337154874103,4.3419916922703,3.69506380333209,4.35830247072115,3.7481944581666,2.37643120085263,4.22442446919304,2.1775813467436,1.6663054862021,1.36593553500459,2.52216230569906,2.43611158613652,2.55127629851979,2.62181303545181,2.76295970985433,2.89298117163023,1.50791283939272,2.17562273527484,1.96705709207614,3.03530420935206,5.61927064957272,4.68846746368813,4.09837363441689,11.6136626514012,2.83957397474631,1.17131623288992,2.36965737506079,2.62865677747807,3.34198011123591,5.09537755419898,2.83367491172426,2.33804686329049,4.34816555741176,5.46246237917072,3.83238230062325,4.27357448801413,3.90928702448583,4.94910368917606,5.30980553359851,2.91336763385978,3.32555912661226,2.45186603682668,2.06711325016541,3.07435147943927,0.775284879504663,3.27180356529755,2.49548164869305,2.21225730555071,2.10837217149998,2.06271086496374,4.76615448055303,1.98067203434441,2.8458910432206,3.21505552547388,3.19212420556092,2.31879462882692,2.30368628842969,4.87143918583359,5.16277757740163,9.10877904714427,1.54369878638473,3.2977250588296,2.74489525383039,4.52346936961169,2.02932984805332,2.1338316966858,6.99554007911642,4.82105785227325,3.07567585436135,2.47664241555867,2.03713980106683,2.0720530270516,2.7338845544205,1.60144721244566,1.69978429993855,1.11961161858926,1.38199973804424,5.72802370809068,3.63786392618306,1.62655573701479,2.70013352054503,3.3454127362315,2.40198820120795,3.50647300600534,3.80205896336545,3.66458318777641,4.79575401179634,3.72803587852155,1.12738587736838,5.08356256549528,2.15096037594227,2.91676782516071,2.45403664607689,2.87225413334323,3.16864544343536,5.208175393758,4.40409246587986,3.14059357073808,4.60848010012585,1.89606672376907,2.43270258348197,2.36235201479103,2.20865399062252,3.58053391334963,1.98681354781265,1.9231271923195,2.36303243479324,1.81739609906666,1.752756553065,2.62148081355785,2.63136277997332,1.73181314952593,1.98690733708667,7.25537227568676,3.32978930061097,2.42227412845584,3.8613461763738,3.86379188064381,3.37828455812128,2.74727436400898,4.93047271881851,2.50786052017682,1.6942555278512,5.52390283808612,5.72895513439397,7.21783365843488,2.74033007908257,3.7769694869485,4.72515750162264,6.30449684513909,3.62513927187364,3.62432218226274,3.1136204275253,2.39414924040619,2.56100408631201,5.34834777550247,3.5634237646757,3.67687016900028,6.44515510624684,4.32673620201678,5.45562656306086,3.28506375292937,4.81610669791456,5.84741658296836,6.27398100048212,6.91471645972588,7.75378830900779,5.23923060411381,5.79421629724277,6.75182271622968,4.12085900803307,5.00476328456951,3.42869252385415,3.54951612318675,5.7224685587357,3.63366041580821,5.36423468367385,5.4153349050673,6.95126296916536,5.26139422875686,4.75314398460516,5.61142271657738,6.8808310512021,5.71325997778268,6.95692773388472,6.50734732981057,3.08650577569826,5.9954538705107,5.84829021113521,4.72716318906256,6.69509162240952,7.27951683094401,6.72416723299222
|short_description=p2@Prune
}}

Revision as of 08:06, 4 August 2015

Short description:p2@Prune
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prune_5end
Coexpression cluster:NA
Association with transcript: 282bp_to_ENSMUST00000015855, NM_173347, uc008qiz.1_5end
EntrezGene:229589
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prune

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.84
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B46.72





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.49e-1223
neuroblast (sensu Vertebrata)9.49e-1223
neuron7.52e-0733
neuronal stem cell7.52e-0733
neuroblast7.52e-0733
electrically signaling cell7.52e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.76e-0954
central nervous system6.71e-0973
gray matter2.38e-0834
nervous system2.61e-0875
neural tube4.80e-0852
neural rod4.80e-0852
future spinal cord4.80e-0852
neural keel4.80e-0852
structure with developmental contribution from neural crest5.08e-0792
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