FFCP PHASE1:Mm9::chr2:174171755..174171815,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=989 | |MCL_coexpression_id=989 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174171755..174171815,+ | |||
|description=CAGE_peak_at_chr2:174171755..174171815,+ | |description=CAGE_peak_at_chr2:174171755..174171815,+ | ||
|id=chr2:174171755..174171815,+ | |id=chr2:174171755..174171815,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.21e-09!73;UBERON:0005743!2.21e-09!73;UBERON:0002346!5.84e-09!71;UBERON:0003075!5.84e-09!71;UBERON:0007284!5.84e-09!71;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0002616!1.89e-07!49;UBERON:0000955!2.47e-07!50;UBERON:0006238!2.47e-07!50;UBERON:0000479!3.50e-07!349 | |ontology_enrichment_uberon=UBERON:0001017!2.21e-09!73;UBERON:0005743!2.21e-09!73;UBERON:0002346!5.84e-09!71;UBERON:0003075!5.84e-09!71;UBERON:0007284!5.84e-09!71;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0002616!1.89e-07!49;UBERON:0000955!2.47e-07!50;UBERON:0006238!2.47e-07!50;UBERON:0000479!3.50e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.21e-09,73;UBERON:0010314,5.18e-09,92;UBERON:0000073,8.25e-09,54;UBERON:0001016,1.33e-08,75;UBERON:0001049,4.46e-08,52;UBERON:0005068,4.46e-08,52;UBERON:0006241,4.46e-08,52;UBERON:0007135,4.46e-08,52;UBERON:0000479,3.50e-07,349;UBERON:0002346,9.12e-07,64;UBERON:0003075,9.12e-07,64;UBERON:0007284,9.12e-07,64 | |||
|phase1_expression=2.40223270657191,0,2.27499619694768,2.41971369045464,2.00358291978539,0.33575854382378,2.33612640595526,2.32421982194837,4.22366166455,5.14941957908386,2.39705155515707,1.67521533890206,1.71200729931206,1.57356724354195,1.66554880907831,1.82227740650843,7.69518065940961,2.36596624018678,2.87940310572051,1.69755860719212,5.78294373027274,3.87234709683453,3.91799683708403,3.67982572424835,4.12936705920906,0.57423196411502,0.86152399231815,1.72376986148711,3.80046838912748,1.00812051903972,1.55211357458713,0.635030673459631,1.23012957516914,15.8481681015439,1.44425809875637,2.1610503896604,1.22501613757421,1.25559489221072,3.1253413780952,0.523523743973798,0,1.36609096991689,0,6.92432498865675,9.0225468785368,7.34187008646726,14.8654355426127,13.2995345392072,16.9158360705543,14.9711022287198,12.8787507895334,14.3752564364972,3.6912173332702,8.70434570413613,4.36921938885203,19.0371982666601,15.1862723167541,20.1112115988203,11.3297218081375,22.2176211294254,12.0427966666174,11.5207140903505,14.2287167377782,8.09909745553259,21.7550599764734,14.9200824138681,10.4860038681442,36.1165207002261,7.05089363697648,6.75029691658453,5.8890989178387,17.7103610330358,16.3442720304194,5.38959516545798,10.9263836960789,5.51531271966013,14.3150645299205,15.1947932321373,18.279177457493,8.83638127792299,17.0167017100482,11.4600941522487,29.314214895145,27.5753678915523,19.2525792198781,16.7938293719991,18.7930618654816,8.76077395378913,3.25622631332691,5.29000920747499,2.02905142091174,8.60423876981386,10.879541339324,9.71465744948071,14.9448576012964,10.3046184032387,6.46044332606059,13.8048561288227,15.3273742715693,19.4336765980687,2.67602497575693,5.13305909657271,0,0,10.1750789275271,12.4146334082798,10.6160133453104,3.9964357901671,0.517875767294343,10.0940654564081,25.502343034622,22.8349108734106,24.2146272118861,23.0605640045513,17.4031286560843,12.6923257242972,7.16865406429684,11.423349196673,3.5384422077995,18.2796540440572,8.39197770149496,11.1521308221101,3.72783522436244,4.9772735491963,15.2896095973822,2.55457055208591,3.23500836165985,0.599902730993408,1.90605340609597,8.53806644607489,7.77751024791665,6.91098936620754,8.8650403298061,9.71718737855256,18.2853479212413,13.4660248346239,15.5814226690984,6.46916247172484,8.08712826987759,3.99839526184301,11.840960309606,7.81667155073808,9.36323074987816,9.64510834148576,7.96027040070536,9.09607414022434,5.71580519814346,7.76110112217047,10.7783996466421,12.8592134514117,15.4836989264275,16.001288467213,16.1267404550847,10.0993128291428,11.7295817752528,15.325638545024,3.51106593656617,1.54408744268829,2.27330799516474,6.62802472113606,10.0846205791871,13.1445304866541,11.1270025725049,11.215561209602,17.123649530499,14.8821724640261,9.65784245038629,9.92505410120941,10.8609500942897,12.148392341853,6.64764238276017,8.04099930839328,7.02560368931362,6.57611451925822,9.04246778825747,7.61494131606705,2.64335026387038,2.64450566663544,15.1434657880016,13.7019636397659,7.98978260196979,9.27744213267376,8.67274370994994,7.03834816616469,7.59246498471219,8.56434564564857,9.80207314321051,4.97391180102877,5.26403035221624,7.19055526923377,6.48414149624083,5.37681437786791,14.035424670528,10.967857210534,10.1436962105772,11.6081256871829,13.7706265889014,9.95928642442524,6.57659986092276,5.46157547524528,4.86696056308262,6.04646103216823,4.15033677922008,6.67380422864376,2.35870794135844,4.94696647246678,1.82574109249653,5.30589751455317,4.58326533206556,3.16465751195892,5.99900339067631,7.68771956926628,73.3217853289508,5.58211421502755,4.68056509671841,6.06189307073068,3.40855085691633,6.27176577772377,8.68339993783042,9.28507917675375,10.7556884451737,10.3544502322865,17.1323881250607,14.4055381399962,15.7108802984769,10.9274842800367,9.45810864637146,10.6303051031412,7.49437412690189,8.52089236521838,7.59813920209941,7.08780387049407,25.6345182696763,19.5806046174735,2.45882136509518,3.31124095565679,16.6972613587304,14.2998257642488,9.83609672260053,11.3611917241968,8.20321370482267,11.7131623288992,8.83235930704476,12.6653462914853,12.0311284004493,3.11384183867716,8.09621403349789,13.151513606009,7.90575555893047,8.67567554338879,6.10342366395555,17.6284947630583,11.0763132360432,4.45419332025846,3.98235415019888,25.0064055239631,16.6277956330613,15.4656165399836,13.2885851796348,11.9899707698132,6.71913562237375,8.72480950746013,10.6949213515416,7.58488219045958,4.21674434299995,4.12542172992747,33.703520969625,8.46287141947158,20.6973894052407,33.4365774649284,43.9803779432838,61.5372420727143,65.9841572614505,68.5046135507848,8.44818149029357,10.1679394014634,5.07215315526412,0.65954501176592,5.48979050766079,3.61877549568935,4.53614907211919,3.77524069413641,6.99554007911642,13.3506217447567,5.29699730473343,17.5428837768739,17.4082855727529,7.91147519419702,4.23752105935178,4.80434163733698,1.5298058699447,1.39951452323658,2.48759952847963,7.63736494412091,11.8625997592926,9.35269548783504,11.3405607862891,12.3362094648537,9.82631536857799,7.68726774393478,5.12451425497083,6.28214260761671,3.11075935900303,4.97071450469541,2.25477175473676,10.3166416770345,9.59659244651166,9.52810822885833,13.5617814651618,15.5439635451516,13.2613679669702,6.77062801188541,3.35549902162275,2.65742532908607,2.30424005006292,5.05617793005085,14.5962155008918,11.7090491167903,5.71651621102298,5.90788095702689,5.76175928865668,3.846254384639,6.79371825003055,5.45218829719997,4.34378797933499,3.7305688500631,2.63136277997332,3.17499077413087,3.62318396762864,5.8949899739955,2.66383144048878,2.15313255862742,4.02923079273788,6.18206700903009,6.38120416534019,4.02933573387983,2.35805216986972,6.01886524842436,12.9892923801925,13.8097570952153,13.7494923225455,13.4045482228076,8.22099023724771,12.0863023582352,15.5255175053315,14.8605997063993,5.89085131679466,13.4617681055473,13.1809931431904,9.97562183502578,12.9757540373142,11.9122291363464,10.6902712940271,9.19217542250071,16.4462578573195,16.6888396363504,18.9342333659171,15.6672271293554,22.8131369901216,16.4104917005886,11.8924714486751,11.0763513660424,10.6829972257441,10.0021675169445,10.8931266388164,11.5745532278223,16.8955219329356,19.8718542181436,24.0008476669791,17.2151531974557,19.7902037656276,18.4589949123057,13.2694226385616,12.4383473600764,17.1952294500406,24.7285528751572,16.703906003041,24.6902599529405,14.2362021749009,13.4951140854522,19.6430900721451,9.14127362997199,13.696369379661,30.9765116643053,13.1001700729429,17.1896843238639,29.8409798027396,14.7796250810075,14.839541479707 | |phase1_expression=2.40223270657191,0,2.27499619694768,2.41971369045464,2.00358291978539,0.33575854382378,2.33612640595526,2.32421982194837,4.22366166455,5.14941957908386,2.39705155515707,1.67521533890206,1.71200729931206,1.57356724354195,1.66554880907831,1.82227740650843,7.69518065940961,2.36596624018678,2.87940310572051,1.69755860719212,5.78294373027274,3.87234709683453,3.91799683708403,3.67982572424835,4.12936705920906,0.57423196411502,0.86152399231815,1.72376986148711,3.80046838912748,1.00812051903972,1.55211357458713,0.635030673459631,1.23012957516914,15.8481681015439,1.44425809875637,2.1610503896604,1.22501613757421,1.25559489221072,3.1253413780952,0.523523743973798,0,1.36609096991689,0,6.92432498865675,9.0225468785368,7.34187008646726,14.8654355426127,13.2995345392072,16.9158360705543,14.9711022287198,12.8787507895334,14.3752564364972,3.6912173332702,8.70434570413613,4.36921938885203,19.0371982666601,15.1862723167541,20.1112115988203,11.3297218081375,22.2176211294254,12.0427966666174,11.5207140903505,14.2287167377782,8.09909745553259,21.7550599764734,14.9200824138681,10.4860038681442,36.1165207002261,7.05089363697648,6.75029691658453,5.8890989178387,17.7103610330358,16.3442720304194,5.38959516545798,10.9263836960789,5.51531271966013,14.3150645299205,15.1947932321373,18.279177457493,8.83638127792299,17.0167017100482,11.4600941522487,29.314214895145,27.5753678915523,19.2525792198781,16.7938293719991,18.7930618654816,8.76077395378913,3.25622631332691,5.29000920747499,2.02905142091174,8.60423876981386,10.879541339324,9.71465744948071,14.9448576012964,10.3046184032387,6.46044332606059,13.8048561288227,15.3273742715693,19.4336765980687,2.67602497575693,5.13305909657271,0,0,10.1750789275271,12.4146334082798,10.6160133453104,3.9964357901671,0.517875767294343,10.0940654564081,25.502343034622,22.8349108734106,24.2146272118861,23.0605640045513,17.4031286560843,12.6923257242972,7.16865406429684,11.423349196673,3.5384422077995,18.2796540440572,8.39197770149496,11.1521308221101,3.72783522436244,4.9772735491963,15.2896095973822,2.55457055208591,3.23500836165985,0.599902730993408,1.90605340609597,8.53806644607489,7.77751024791665,6.91098936620754,8.8650403298061,9.71718737855256,18.2853479212413,13.4660248346239,15.5814226690984,6.46916247172484,8.08712826987759,3.99839526184301,11.840960309606,7.81667155073808,9.36323074987816,9.64510834148576,7.96027040070536,9.09607414022434,5.71580519814346,7.76110112217047,10.7783996466421,12.8592134514117,15.4836989264275,16.001288467213,16.1267404550847,10.0993128291428,11.7295817752528,15.325638545024,3.51106593656617,1.54408744268829,2.27330799516474,6.62802472113606,10.0846205791871,13.1445304866541,11.1270025725049,11.215561209602,17.123649530499,14.8821724640261,9.65784245038629,9.92505410120941,10.8609500942897,12.148392341853,6.64764238276017,8.04099930839328,7.02560368931362,6.57611451925822,9.04246778825747,7.61494131606705,2.64335026387038,2.64450566663544,15.1434657880016,13.7019636397659,7.98978260196979,9.27744213267376,8.67274370994994,7.03834816616469,7.59246498471219,8.56434564564857,9.80207314321051,4.97391180102877,5.26403035221624,7.19055526923377,6.48414149624083,5.37681437786791,14.035424670528,10.967857210534,10.1436962105772,11.6081256871829,13.7706265889014,9.95928642442524,6.57659986092276,5.46157547524528,4.86696056308262,6.04646103216823,4.15033677922008,6.67380422864376,2.35870794135844,4.94696647246678,1.82574109249653,5.30589751455317,4.58326533206556,3.16465751195892,5.99900339067631,7.68771956926628,73.3217853289508,5.58211421502755,4.68056509671841,6.06189307073068,3.40855085691633,6.27176577772377,8.68339993783042,9.28507917675375,10.7556884451737,10.3544502322865,17.1323881250607,14.4055381399962,15.7108802984769,10.9274842800367,9.45810864637146,10.6303051031412,7.49437412690189,8.52089236521838,7.59813920209941,7.08780387049407,25.6345182696763,19.5806046174735,2.45882136509518,3.31124095565679,16.6972613587304,14.2998257642488,9.83609672260053,11.3611917241968,8.20321370482267,11.7131623288992,8.83235930704476,12.6653462914853,12.0311284004493,3.11384183867716,8.09621403349789,13.151513606009,7.90575555893047,8.67567554338879,6.10342366395555,17.6284947630583,11.0763132360432,4.45419332025846,3.98235415019888,25.0064055239631,16.6277956330613,15.4656165399836,13.2885851796348,11.9899707698132,6.71913562237375,8.72480950746013,10.6949213515416,7.58488219045958,4.21674434299995,4.12542172992747,33.703520969625,8.46287141947158,20.6973894052407,33.4365774649284,43.9803779432838,61.5372420727143,65.9841572614505,68.5046135507848,8.44818149029357,10.1679394014634,5.07215315526412,0.65954501176592,5.48979050766079,3.61877549568935,4.53614907211919,3.77524069413641,6.99554007911642,13.3506217447567,5.29699730473343,17.5428837768739,17.4082855727529,7.91147519419702,4.23752105935178,4.80434163733698,1.5298058699447,1.39951452323658,2.48759952847963,7.63736494412091,11.8625997592926,9.35269548783504,11.3405607862891,12.3362094648537,9.82631536857799,7.68726774393478,5.12451425497083,6.28214260761671,3.11075935900303,4.97071450469541,2.25477175473676,10.3166416770345,9.59659244651166,9.52810822885833,13.5617814651618,15.5439635451516,13.2613679669702,6.77062801188541,3.35549902162275,2.65742532908607,2.30424005006292,5.05617793005085,14.5962155008918,11.7090491167903,5.71651621102298,5.90788095702689,5.76175928865668,3.846254384639,6.79371825003055,5.45218829719997,4.34378797933499,3.7305688500631,2.63136277997332,3.17499077413087,3.62318396762864,5.8949899739955,2.66383144048878,2.15313255862742,4.02923079273788,6.18206700903009,6.38120416534019,4.02933573387983,2.35805216986972,6.01886524842436,12.9892923801925,13.8097570952153,13.7494923225455,13.4045482228076,8.22099023724771,12.0863023582352,15.5255175053315,14.8605997063993,5.89085131679466,13.4617681055473,13.1809931431904,9.97562183502578,12.9757540373142,11.9122291363464,10.6902712940271,9.19217542250071,16.4462578573195,16.6888396363504,18.9342333659171,15.6672271293554,22.8131369901216,16.4104917005886,11.8924714486751,11.0763513660424,10.6829972257441,10.0021675169445,10.8931266388164,11.5745532278223,16.8955219329356,19.8718542181436,24.0008476669791,17.2151531974557,19.7902037656276,18.4589949123057,13.2694226385616,12.4383473600764,17.1952294500406,24.7285528751572,16.703906003041,24.6902599529405,14.2362021749009,13.4951140854522,19.6430900721451,9.14127362997199,13.696369379661,30.9765116643053,13.1001700729429,17.1896843238639,29.8409798027396,14.7796250810075,14.839541479707 | ||
|short_description=p@chr2:174171755..174171815,+ | |short_description=p@chr2:174171755..174171815,+ | ||
}} | }} |
Latest revision as of 16:34, 4 August 2015
Short description: | p@chr2:174171755..174171815, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:174171755..174171815, + |
Coexpression cluster: | MCL_coexpression_mm9:989 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.21e-09 | 73 |
structure with developmental contribution from neural crest | 5.18e-09 | 92 |
regional part of nervous system | 8.25e-09 | 54 |
nervous system | 1.33e-08 | 75 |
neural tube | 4.46e-08 | 52 |
neural rod | 4.46e-08 | 52 |
future spinal cord | 4.46e-08 | 52 |
neural keel | 4.46e-08 | 52 |
tissue | 3.50e-07 | 349 |
neurectoderm | 9.12e-07 | 64 |
neural plate | 9.12e-07 | 64 |
presumptive neural plate | 9.12e-07 | 64 |