FFCP PHASE1:Mm9::chr7:20282989..20283002,-: Difference between revisions
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|id=chr7:20282989..20283002,-
|short_description=p@chr7:20282989..20283002,-
|description=CAGE_peak_at_chr7:20282989..20283002,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:20282989..20283002,- | |||
|description=CAGE_peak_at_chr7:20282989..20283002,- | |||
|id=chr7:20282989..20283002,- | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-07!50;CL:0000221!4.90e-07!44;CL:0000133!4.90e-07!44;CL:0002319!9.62e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.88e-11,5;CL:0002319,3.04e-09,43;CL:0000221,6.04e-09,44;CL:0000133,6.04e-09,44;CL:0002321,8.49e-09,70;CL:0002194,1.37e-08,4;CL:0000766,1.37e-08,4;CL:0000234,1.37e-08,4;CL:0000576,1.37e-08,4;CL:0000235,1.37e-08,4;CL:0000864,1.37e-08,4;CL:0002009,1.37e-08,4;CL:0000040,1.37e-08,4;CL:0000559,1.37e-08,4;CL:0000723,2.24e-08,91;CL:0000048,2.24e-08,91;CL:0002092,4.61e-08,3;CL:0002540,4.61e-08,3;CL:0000034,1.70e-07,97;CL:0002614,9.84e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!6.73e-14!25;UBERON:0002330!6.73e-14!25;UBERON:0002107!6.81e-13!22;UBERON:0007499!6.81e-13!22;UBERON:0006925!6.81e-13!22;UBERON:0009497!6.81e-13!22;UBERON:0000015!6.81e-13!22;UBERON:0002423!6.81e-13!22;UBERON:0006235!6.81e-13!22;UBERON:0008835!6.81e-13!22;UBERON:0003894!6.81e-13!22;UBERON:0004161!6.81e-13!22;UBERON:0008836!6.81e-13!22;UBERON:0009854!7.06e-12!23;UBERON:0009856!7.06e-12!23;UBERON:0004121!3.64e-11!102;UBERON:0000924!3.64e-11!102;UBERON:0006601!3.64e-11!102;UBERON:0004111!5.11e-11!122;UBERON:0001017!1.01e-10!73;UBERON:0005743!1.01e-10!73;UBERON:0000025!1.71e-10!114;UBERON:0000073!2.15e-10!75;UBERON:0001016!2.15e-10!75;UBERON:0005256!3.05e-09!47;UBERON:0002020!1.42e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.81e-22,22;UBERON:0007499,2.81e-22,22;UBERON:0006925,2.81e-22,22;UBERON:0009497,2.81e-22,22;UBERON:0000015,2.81e-22,22;UBERON:0002423,2.81e-22,22;UBERON:0006235,2.81e-22,22;UBERON:0008835,2.81e-22,22;UBERON:0003894,2.81e-22,22;UBERON:0004161,2.81e-22,22;UBERON:0008836,2.81e-22,22;UBERON:0009854,3.99e-21,23;UBERON:0009856,3.99e-21,23;UBERON:0002365,4.25e-19,25;UBERON:0002330,4.25e-19,25;UBERON:0000025,1.82e-09,114;UBERON:0005256,8.23e-09,45;UBERON:0004111,2.21e-08,122;UBERON:0003914,2.84e-08,47;UBERON:0005172,8.86e-08,49;UBERON:0005173,8.86e-08,49;UBERON:0002417,8.86e-08,49;UBERON:0000916,8.86e-08,49;UBERON:0001017,1.27e-07,73;UBERON:0001016,2.73e-07,75;UBERON:0011216,5.84e-07,194;UBERON:0002020,6.18e-07,34;UBERON:0002038,9.84e-07,3;UBERON:0009663,9.84e-07,3;UBERON:0009661,9.84e-07,3;UBERON:0000125,9.84e-07,3;UBERON:0002308,9.84e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.218025156380447,0.659058548203415,3.4997381833371,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0,0,42.2952867122258,57.3542490288845,33.3925654024667,14.6804054154018,22.6688800139717,0,0,0.210324961351382,3.42781181284564,3.53389665522582,0,0,0,0,1.53224805702225,1.68967186581868,0,0.0914876436024097,0,2.51264699101243,4.50210088025344,2.75036845998258,2.65165726926301,2.13557521198654,0.372798891650601,0,0.151143120213571,1.44932244350839,14.6272059086836,25.1589393471868,33.4615978815447,48.0834548911275,32.2579358710082,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,4.79572294820052,0.517875767294343,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.521472960576829,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,5.63259991465583,0.166845105716094,0.196558995113203,0,0.608580364165509,0.964708639009667,0.50925170356284,2.30156909960649,4.05338066937588,4.94210543738547,28.7536413054709,5.20997326735905,7.80094182786401,3.78868316920668,2.15276896226295,5.30687873499704,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.289298117163023,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.631016438832513,0,0,0.716906393857656,0.891194696329576,0.849229592366497,1.21443210502468,1.16902343164525,1.18586333383957,0.642642632843614,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,1.37016503954128,3.0215755895588,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.218025156380447,0.659058548203415,3.4997381833371,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0,0,42.2952867122258,57.3542490288845,33.3925654024667,14.6804054154018,22.6688800139717,0,0,0.210324961351382,3.42781181284564,3.53389665522582,0,0,0,0,1.53224805702225,1.68967186581868,0,0.0914876436024097,0,2.51264699101243,4.50210088025344,2.75036845998258,2.65165726926301,2.13557521198654,0.372798891650601,0,0.151143120213571,1.44932244350839,14.6272059086836,25.1589393471868,33.4615978815447,48.0834548911275,32.2579358710082,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,4.79572294820052,0.517875767294343,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.521472960576829,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,5.63259991465583,0.166845105716094,0.196558995113203,0,0.608580364165509,0.964708639009667,0.50925170356284,2.30156909960649,4.05338066937588,4.94210543738547,28.7536413054709,5.20997326735905,7.80094182786401,3.78868316920668,2.15276896226295,5.30687873499704,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.289298117163023,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.631016438832513,0,0,0.716906393857656,0.891194696329576,0.849229592366497,1.21443210502468,1.16902343164525,1.18586333383957,0.642642632843614,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,1.37016503954128,3.0215755895588,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr7:20282989..20283002,- | |||
}} | }} |
Latest revision as of 18:29, 4 August 2015
Short description: | p@chr7:20282989..20283002, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282989..20283002, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.88e-11 | 5 |
neural cell | 3.04e-09 | 43 |
ectodermal cell | 6.04e-09 | 44 |
neurectodermal cell | 6.04e-09 | 44 |
embryonic cell | 8.49e-09 | 70 |
monopoietic cell | 1.37e-08 | 4 |
myeloid leukocyte | 1.37e-08 | 4 |
phagocyte | 1.37e-08 | 4 |
monocyte | 1.37e-08 | 4 |
macrophage | 1.37e-08 | 4 |
tissue-resident macrophage | 1.37e-08 | 4 |
macrophage dendritic cell progenitor | 1.37e-08 | 4 |
monoblast | 1.37e-08 | 4 |
promonocyte | 1.37e-08 | 4 |
somatic stem cell | 2.24e-08 | 91 |
multi fate stem cell | 2.24e-08 | 91 |
bone marrow cell | 4.61e-08 | 3 |
mesenchymal stem cell of the bone marrow | 4.61e-08 | 3 |
stem cell | 1.70e-07 | 97 |
neuron of the substantia nigra | 9.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.81e-22 | 22 |
epithelial sac | 2.81e-22 | 22 |
digestive gland | 2.81e-22 | 22 |
epithelium of foregut-midgut junction | 2.81e-22 | 22 |
anatomical boundary | 2.81e-22 | 22 |
hepatobiliary system | 2.81e-22 | 22 |
foregut-midgut junction | 2.81e-22 | 22 |
hepatic diverticulum | 2.81e-22 | 22 |
liver primordium | 2.81e-22 | 22 |
septum transversum | 2.81e-22 | 22 |
liver bud | 2.81e-22 | 22 |
digestive tract diverticulum | 3.99e-21 | 23 |
sac | 3.99e-21 | 23 |
exocrine gland | 4.25e-19 | 25 |
exocrine system | 4.25e-19 | 25 |
tube | 1.82e-09 | 114 |
trunk mesenchyme | 8.23e-09 | 45 |
anatomical conduit | 2.21e-08 | 122 |
epithelial tube | 2.84e-08 | 47 |
abdomen element | 8.86e-08 | 49 |
abdominal segment element | 8.86e-08 | 49 |
abdominal segment of trunk | 8.86e-08 | 49 |
abdomen | 8.86e-08 | 49 |
central nervous system | 1.27e-07 | 73 |
nervous system | 2.73e-07 | 75 |
organ system subdivision | 5.84e-07 | 194 |
gray matter | 6.18e-07 | 34 |
substantia nigra | 9.84e-07 | 3 |
telencephalic nucleus | 9.84e-07 | 3 |
midbrain nucleus | 9.84e-07 | 3 |
neural nucleus | 9.84e-07 | 3 |
nucleus of brain | 9.84e-07 | 3 |