FFCP PHASE1:Mm9::chr17:51971932..51971958,-: Difference between revisions
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{{FFCP|EntrezGene=20230|HGNC=|MCL_coexpression_id=118|UniProt=Q60611|association_with_transcript=13bp_to_NM_009122,uc008czf.2_5end|description=CAGE_peak_2_at_Satb1_5end|id=chr17:51971932..51971958,-|ontology_enrichment_celltype=CL:0000838!3.47e-09!12;CL:0000084!1.41e-08!11;CL:0000827!1.41e-08!11;CL:0000542!7.05e-08!13;CL:0000051!7.05e-08!13;CL:0000791!1.98e-07!9;CL:0000789!1.98e-07!9;CL:0002420!1.98e-07!9;CL:0002419!1.98e-07!9;CL:0000790!1.98e-07!9;CL:0000624!8.79e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,1.45e-11,12;CL:0000084,9.16e-11,11;CL:0000827,9.16e-11,11;CL:0000542,2.80e-10,13;CL:0000051,2.80e-10,13;CL:0000791,2.89e-09,9;CL:0000789,2.89e-09,9;CL:0002420,2.89e-09,9;CL:0002419,2.89e-09,9;CL:0000790,2.89e-09,9;CL:0000988,2.01e-08,32;CL:0002032,2.01e-08,32;CL:0000037,2.01e-08,32;CL:0000837,2.01e-08,32;CL:0000624,2.03e-08,8;CL:0002031,2.43e-08,25;CL:0000893,9.36e-07,6;CL:0002489,9.36e-07,6;CL:0000898,9.36e-07,6;CL:0000809,9.36e-07,6;CL:0000810,9.36e-07,6;CL:0000895,9.36e-07,6;CL:0000808,9.36e-07,6;CL:0000894,9.36e-07,6;CL:0000806,9.36e-07,6;CL:0000807,9.36e-07,6;CL:0000805,9.36e-07,6;CL:0002425,9.36e-07,6;CL:0002436,9.36e-07,6;CL:0002427,9.36e-07,6;CL:0002428,9.36e-07,6;CL:0002429,9.36e-07,6;CL:0002433,9.36e-07,6;CL:0002431,9.36e-07,6;CL:0002432,9.36e-07,6;CL:0000738,9.77e-07,17;CL:0002087,9.77e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.12e-11!29;UBERON:0003408!7.63e-11!24;UBERON:0002370!1.07e-10!23;UBERON:0000974!1.07e-10!23;UBERON:0004807!1.07e-10!23;UBERON:0005058!1.07e-10!23;UBERON:0003351!1.07e-10!23;UBERON:0009113!1.07e-10!23;UBERON:0003295!1.07e-10!23;UBERON:0009722!1.07e-10!23;UBERON:0005562!1.07e-10!23;UBERON:0007690!1.07e-10!23;UBERON:0006562!1.02e-09!24;UBERON:0001557!1.02e-09!24;UBERON:0001042!1.02e-09!24;UBERON:0008814!1.02e-09!24;UBERON:0009145!1.02e-09!24;UBERON:0002193!4.99e-09!48;UBERON:0002390!1.65e-08!45;UBERON:0003061!1.65e-08!45;UBERON:0000072!2.58e-07!27;UBERON:0001004!6.82e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0003408,6.57e-15,24;UBERON:0004177,9.27e-15,29;UBERON:0005057,9.27e-15,29;UBERON:0002370,9.95e-15,23;UBERON:0000974,9.95e-15,23;UBERON:0004807,9.95e-15,23;UBERON:0005058,9.95e-15,23;UBERON:0003351,9.95e-15,23;UBERON:0009113,9.95e-15,23;UBERON:0003295,9.95e-15,23;UBERON:0009722,9.95e-15,23;UBERON:0005562,9.95e-15,23;UBERON:0007690,9.95e-15,23;UBERON:0006562,9.69e-14,24;UBERON:0001557,9.69e-14,24;UBERON:0001042,9.69e-14,24;UBERON:0008814,9.69e-14,24;UBERON:0009145,9.69e-14,24;UBERON:0002193,3.35e-12,48;UBERON:0002405,3.35e-12,48;UBERON:0002390,6.43e-12,45;UBERON:0003061,6.43e-12,45;UBERON:0000077,1.24e-11,35;UBERON:0000072,3.02e-11,27;UBERON:0001004,1.29e-09,42;UBERON:0000065,2.31e-09,41;UBERON:0007811,8.61e-08,36;UBERON:0002021,1.05e-07,10;UBERON:0000411,1.05e-07,10;UBERON:0001950,1.05e-07,10|phase1_expression=0,0,0,0,0,0,0,62.7539351926061,314.099639120369,439.339115906382,109.065845759647,164.011558894412,128.400547448404,120.989836947892,1.99865857089398,4.656931149966,1.39912375625629,21.7668894097184,21.9383093769182,21.6438722416995,8.75945888556019,26.4113930194355,25.3363795464767,0.47997726838022,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.906676722619,1.0470474879476,7.64700934440319,6.83045484958446,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,69.2942163018451,182.791259786859,136.45408245184,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,1.65903379693564,1.89008313664367,2.10324961351382,1.99955689082663,1.98781686856452,0.61245399607477,0.862609239164127,0.919218786610021,0,0.383062014255563,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.30559649555362,2.35702868378934,4.27115042397309,1.4911955666024,0.757261933331841,0.151143120213571,0,0,0,0,0,0,4.77511028447956,0,0,0,0.422530259330042,0,0,0,0,0,0,6.50848114398642,26.1527262483643,0.890652834388949,0.173485326766136,0.304465478312141,0.691846491768175,1.3565037649736,0.470354828542819,0.125666591329675,0,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0,0.255457055208591,11.981512450592,5.99902730993408,5.20987930999565,0,0,0.879580464790051,4.17178368461463,5.11430914660661,0,0.324482526135515,0,0.995255764880744,0.505445516867349,1.89397670297827,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.374806898238915,0.258703370739016,0,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,3.1342694986995,2.05782136407943,0.199034266818493,0.702213187313235,0.257347907114715,1.13665399758237,0,0,0,0,0.393528463494808,0,0,0.268273401399619,2.33530684734339,0,1.14917224855367,0.56748166682099,2.92399974850665,0.658650345873152,0.805238512562231,2.73376933133365,3.39585220851639,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,0.597423819763102,0,0.228497025219458,0,0,0,0,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20230 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q60611 | |||
|association_with_transcript=13bp_to_NM_009122,uc008czf.2_5end | |||
|cluster_id=chr17:51971932..51971958,- | |||
|description=CAGE_peak_2_at_Satb1_5end | |||
|id=chr17:51971932..51971958,- | |||
|ontology_enrichment_celltype=CL:0000838!3.47e-09!12;CL:0000084!1.41e-08!11;CL:0000827!1.41e-08!11;CL:0000542!7.05e-08!13;CL:0000051!7.05e-08!13;CL:0000791!1.98e-07!9;CL:0000789!1.98e-07!9;CL:0002420!1.98e-07!9;CL:0002419!1.98e-07!9;CL:0000790!1.98e-07!9;CL:0000624!8.79e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.45e-11,12;CL:0000084,9.16e-11,11;CL:0000827,9.16e-11,11;CL:0000542,2.80e-10,13;CL:0000051,2.80e-10,13;CL:0000791,2.89e-09,9;CL:0000789,2.89e-09,9;CL:0002420,2.89e-09,9;CL:0002419,2.89e-09,9;CL:0000790,2.89e-09,9;CL:0000988,2.01e-08,32;CL:0002032,2.01e-08,32;CL:0000037,2.01e-08,32;CL:0000837,2.01e-08,32;CL:0000624,2.03e-08,8;CL:0002031,2.43e-08,25;CL:0000893,9.36e-07,6;CL:0002489,9.36e-07,6;CL:0000898,9.36e-07,6;CL:0000809,9.36e-07,6;CL:0000810,9.36e-07,6;CL:0000895,9.36e-07,6;CL:0000808,9.36e-07,6;CL:0000894,9.36e-07,6;CL:0000806,9.36e-07,6;CL:0000807,9.36e-07,6;CL:0000805,9.36e-07,6;CL:0002425,9.36e-07,6;CL:0002436,9.36e-07,6;CL:0002427,9.36e-07,6;CL:0002428,9.36e-07,6;CL:0002429,9.36e-07,6;CL:0002433,9.36e-07,6;CL:0002431,9.36e-07,6;CL:0002432,9.36e-07,6;CL:0000738,9.77e-07,17;CL:0002087,9.77e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.12e-11!29;UBERON:0003408!7.63e-11!24;UBERON:0002370!1.07e-10!23;UBERON:0000974!1.07e-10!23;UBERON:0004807!1.07e-10!23;UBERON:0005058!1.07e-10!23;UBERON:0003351!1.07e-10!23;UBERON:0009113!1.07e-10!23;UBERON:0003295!1.07e-10!23;UBERON:0009722!1.07e-10!23;UBERON:0005562!1.07e-10!23;UBERON:0007690!1.07e-10!23;UBERON:0006562!1.02e-09!24;UBERON:0001557!1.02e-09!24;UBERON:0001042!1.02e-09!24;UBERON:0008814!1.02e-09!24;UBERON:0009145!1.02e-09!24;UBERON:0002193!4.99e-09!48;UBERON:0002390!1.65e-08!45;UBERON:0003061!1.65e-08!45;UBERON:0000072!2.58e-07!27;UBERON:0001004!6.82e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,6.57e-15,24;UBERON:0004177,9.27e-15,29;UBERON:0005057,9.27e-15,29;UBERON:0002370,9.95e-15,23;UBERON:0000974,9.95e-15,23;UBERON:0004807,9.95e-15,23;UBERON:0005058,9.95e-15,23;UBERON:0003351,9.95e-15,23;UBERON:0009113,9.95e-15,23;UBERON:0003295,9.95e-15,23;UBERON:0009722,9.95e-15,23;UBERON:0005562,9.95e-15,23;UBERON:0007690,9.95e-15,23;UBERON:0006562,9.69e-14,24;UBERON:0001557,9.69e-14,24;UBERON:0001042,9.69e-14,24;UBERON:0008814,9.69e-14,24;UBERON:0009145,9.69e-14,24;UBERON:0002193,3.35e-12,48;UBERON:0002405,3.35e-12,48;UBERON:0002390,6.43e-12,45;UBERON:0003061,6.43e-12,45;UBERON:0000077,1.24e-11,35;UBERON:0000072,3.02e-11,27;UBERON:0001004,1.29e-09,42;UBERON:0000065,2.31e-09,41;UBERON:0007811,8.61e-08,36;UBERON:0002021,1.05e-07,10;UBERON:0000411,1.05e-07,10;UBERON:0001950,1.05e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,62.7539351926061,314.099639120369,439.339115906382,109.065845759647,164.011558894412,128.400547448404,120.989836947892,1.99865857089398,4.656931149966,1.39912375625629,21.7668894097184,21.9383093769182,21.6438722416995,8.75945888556019,26.4113930194355,25.3363795464767,0.47997726838022,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.906676722619,1.0470474879476,7.64700934440319,6.83045484958446,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,69.2942163018451,182.791259786859,136.45408245184,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,1.65903379693564,1.89008313664367,2.10324961351382,1.99955689082663,1.98781686856452,0.61245399607477,0.862609239164127,0.919218786610021,0,0.383062014255563,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.30559649555362,2.35702868378934,4.27115042397309,1.4911955666024,0.757261933331841,0.151143120213571,0,0,0,0,0,0,4.77511028447956,0,0,0,0.422530259330042,0,0,0,0,0,0,6.50848114398642,26.1527262483643,0.890652834388949,0.173485326766136,0.304465478312141,0.691846491768175,1.3565037649736,0.470354828542819,0.125666591329675,0,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0,0.255457055208591,11.981512450592,5.99902730993408,5.20987930999565,0,0,0.879580464790051,4.17178368461463,5.11430914660661,0,0.324482526135515,0,0.995255764880744,0.505445516867349,1.89397670297827,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.374806898238915,0.258703370739016,0,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,3.1342694986995,2.05782136407943,0.199034266818493,0.702213187313235,0.257347907114715,1.13665399758237,0,0,0,0,0.393528463494808,0,0,0.268273401399619,2.33530684734339,0,1.14917224855367,0.56748166682099,2.92399974850665,0.658650345873152,0.805238512562231,2.73376933133365,3.39585220851639,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,0.597423819763102,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,1.11642284300551,0.624075346229121,0,0.179397413521912,0,2.03228509183265,0,0.162964976442026,0,0.234690248288502,4.52266895092903,0,0.780534591431195,0.630540576424764,1.10732344824387,2.23236676120482,1.96635977658886,2.59027472798843,1.88043776155965,0,0,0.491764273019036,2.20749397043786,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0,0,0,0,0,0,0,0.704015124191131,0,5.07215315526412,0.8244312647074,5.00539722757307,2.11095237248546,0.716234064018819,0.492422699235184,0.582961673259701,0.556275906031529,4.61351378154202,0.206386867963223,0.370389054739423,2.0720530270516,4.51090951479383,5.49067615695654,13.2583175395207,14.5549510416604,9.81219814011409,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,1.29614973291793,1.86401793926078,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0,0.241584120826006,0,222.471828922237,2.63542779877213,5.34096977257102,30.5313933997818,85.7537872247236,132.321782284322,175.725747198194,164.821512326828,196.884577398888,194.63218419687,233.513444776923,274.636307924622,273.145418416895,361.617135349774,0,3.32978930061097,28.3495786885943,3.8613461763738,0.386379188064381,0,0.183151624267265,0,7.52358156053045,9.03602948187307,8.28585425712918,12.6037012956667,14.2638141345261,8.90607275701835,6.7985450765073,8.77529250301348,4.95353323546643,5.89085131679466,6.73088405277366,0.103787347584177,0,0.341467211508268,0.972426868273176,1.25767897576789,2.02227859295016,0.888986911206461,0.618105171716683,0.962757628775446,1.51618327058278,0.50695859978048,2.64076877940507,1.12369808963859,1.79270426733634,1.32101578597911,1.42888107384922,1.15884325944855,3.08654752741928,0.824171801606613,2.06078488188156,0.685738504770831,2.12970967391205,1.90748951957857,1.88950341622027,1.12931256498397,1.86152137361688,1.28049581010941,1.57841826862706,2.03706170768793,1.68342681497322,1.18635018124174,1.67457620038458,2.04615521584845,1.85924209423159,3.08650577569826,2.99772693525535,2.33931608445408,2.79332370262788,0.57386499620653,0.882365676478062,0.231867835620421 | |||
|short_description=p2@Satb1 | |||
}} |
Revision as of 02:13, 5 August 2015
Short description: | p2@Satb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Satb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 13bp_to_NM_009122, uc008czf.2_5end |
EntrezGene: | 20230 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 6.57e-15 | 24 |
hemopoietic organ | 9.27e-15 | 29 |
immune organ | 9.27e-15 | 29 |
thymus | 9.95e-15 | 23 |
neck | 9.95e-15 | 23 |
respiratory system epithelium | 9.95e-15 | 23 |
hemolymphoid system gland | 9.95e-15 | 23 |
pharyngeal epithelium | 9.95e-15 | 23 |
thymic region | 9.95e-15 | 23 |
pharyngeal gland | 9.95e-15 | 23 |
entire pharyngeal arch endoderm | 9.95e-15 | 23 |
thymus primordium | 9.95e-15 | 23 |
early pharyngeal endoderm | 9.95e-15 | 23 |
pharynx | 9.69e-14 | 24 |
upper respiratory tract | 9.69e-14 | 24 |
chordate pharynx | 9.69e-14 | 24 |
pharyngeal arch system | 9.69e-14 | 24 |
pharyngeal region of foregut | 9.69e-14 | 24 |
hemolymphoid system | 3.35e-12 | 48 |
immune system | 3.35e-12 | 48 |
hematopoietic system | 6.43e-12 | 45 |
blood island | 6.43e-12 | 45 |
mixed endoderm/mesoderm-derived structure | 1.24e-11 | 35 |
segment of respiratory tract | 3.02e-11 | 27 |
respiratory system | 1.29e-09 | 42 |
respiratory tract | 2.31e-09 | 41 |
craniocervical region | 8.61e-08 | 36 |
occipital lobe | 1.05e-07 | 10 |
visual cortex | 1.05e-07 | 10 |
neocortex | 1.05e-07 | 10 |