Personal tools

FFCP PHASE1:Mm9::chr9:43552057..43552102,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2495
|MCL_coexpression_id=2495
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr9:43552057..43552102,+
|description=CAGE_peak_at_chr9:43552057..43552102,+
|description=CAGE_peak_at_chr9:43552057..43552102,+
|id=chr9:43552057..43552102,+
|id=chr9:43552057..43552102,+
|ontology_enrichment_celltype=CL:0000117!5.18e-07!23;CL:0000337!5.18e-07!23
|ontology_enrichment_celltype=CL:0000117!5.18e-07!23;CL:0000337!5.18e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-07,23;CL:0000337,4.72e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.68e-09!102;UBERON:0000924!1.68e-09!102;UBERON:0006601!1.68e-09!102;UBERON:0000033!8.53e-09!63;UBERON:0000119!5.96e-08!183;UBERON:0000153!1.59e-07!94;UBERON:0000483!2.11e-07!181;UBERON:0000475!3.69e-07!200;UBERON:0007811!4.19e-07!86;UBERON:0001049!6.77e-07!52;UBERON:0005068!6.77e-07!52;UBERON:0006241!6.77e-07!52;UBERON:0007135!6.77e-07!52
|ontology_enrichment_uberon=UBERON:0004121!1.68e-09!102;UBERON:0000924!1.68e-09!102;UBERON:0006601!1.68e-09!102;UBERON:0000033!8.53e-09!63;UBERON:0000119!5.96e-08!183;UBERON:0000153!1.59e-07!94;UBERON:0000483!2.11e-07!181;UBERON:0000475!3.69e-07!200;UBERON:0007811!4.19e-07!86;UBERON:0001049!6.77e-07!52;UBERON:0005068!6.77e-07!52;UBERON:0006241!6.77e-07!52;UBERON:0007135!6.77e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.06e-11,95;UBERON:0000924,8.06e-11,95;UBERON:0006601,8.06e-11,95;UBERON:0010371,8.60e-11,73;UBERON:0011216,2.41e-10,194;UBERON:0000119,1.39e-08,176;UBERON:0002346,4.20e-08,64;UBERON:0003075,4.20e-08,64;UBERON:0007284,4.20e-08,64;UBERON:0000483,5.21e-08,174;UBERON:0000073,1.67e-07,54;UBERON:0001049,6.19e-07,52;UBERON:0005068,6.19e-07,52;UBERON:0006241,6.19e-07,52;UBERON:0007135,6.19e-07,52
|phase1_expression=8.64803774365887,7.32848356042658,13.6499771816861,18.4503168897166,16.5295590882295,21.1527882608981,17.5209480446644,0.129123323441576,0.985521055061667,1.87251621057595,0,0.159544317990673,0.171200729931206,0,0.666219523631325,0.404950534779652,0,0.788655413395594,0.822686601634433,0.42438965179803,6.80346321208558,0,0,5.59973479776923,6.19405058881359,9.18771142584032,13.3536218809313,11.8509177977239,2.47030445293286,5.04060259519861,11.0865255327652,0,0,0,2.59966457776147,2.99222361645286,4.28755648150975,0,0,0,0,0,0.485510353031154,2.7697299954627,2.12891555560981,3.48738829107195,11.7358701652206,2.39827672018491,1.75748946187577,4.08302788055995,4.61955191363696,7.18762821824858,0.838913030288682,0,0,3.8588915405392,1.71920063963254,2.57836046138721,10.7227724255587,7.93486468908049,11.4089652631112,13.2149367506962,8.00365316500025,0.899899717281399,1.97773272513395,3.5524005747305,5.99200221036809,4.61061966385865,5.59923906465779,4.59020190327748,4.20649922702764,18.2816630018434,14.7981922437581,5.63457676388789,5.46319184803947,4.5960939330501,6.60695285996332,10.3426743849002,8.44835932909339,10.2871304429551,10.6125666578795,16.6692278578163,10.3297709630511,9.00420176050688,11.7654650788144,14.7314292736834,17.938831780687,10.4383689662168,5.75519069332199,3.70300644523249,0.579728977403356,16.3480536626463,19.7191686775248,30.2233787317178,20.1430689408777,15.2329141613094,6.46044332606059,0.852151612890289,0.779358013808606,0,8.45060518660083,1.28326477414318,0,0,7.14420435337007,7.60079596425296,4.04419556011827,12.4460428893775,0.258937883647172,4.45326417194474,4.16364784238726,3.04465478312141,2.99800146432876,1.65794904607885,1.29347577849275,2.63899841792318,11.6181634835156,0.722996784599558,0,1.94120219936891,1.32504911076236,0,1.86391761218122,6.73395833126558,7.33063473847093,4.08731288333746,0.11981512450592,0,0.127070227073065,6.29120685500255,2.28750301409313,10.0523481690292,6.95297280769106,8.43861009190091,5.81806524766768,9.89671704713322,2.03678727700633,1.36847667671102,3.28539585963777,7.99679052368601,10.539755879979,7.58676944630461,8.10279584124071,7.38453607395004,10.1374383735478,8.58361925908494,11.2442069471675,15.78090561508,3.66465587985832,3.59301552318857,4.57472922826267,7.89104636739269,9.17555922444473,12.1888258282758,10.0833246839892,2.9855140022774,0.702213187313235,0,0.284163499395593,2.48550927042602,0.938104239924385,0.540186184383045,0.710234206755631,0.787056926989615,0,0,1.3413670069981,0.467061369468678,1.15191894939436,0.32833492815819,0.56748166682099,0.877199924551994,0.658650345873152,0.939444931322602,5.88811855979556,5.45394445610208,6.93879444265976,4.49565963328025,1.2797295032114,1.39342003116263,2.96395161040815,2.62188582010345,4.22518283305254,3.23383564391351,7.59246498471219,6.0938613247884,7.03738584640755,6.76452004939913,4.09424582950152,2.69645822596266,3.8904848977445,2.78797782556114,1.13800740571849,2.74196430263349,6.76246414038483,2.44381593414377,3.49114476901726,4.1380133735288,4.3000845244495,5.31396532726568,5.49495547444812,7.65062416315163,18.0836102523161,2.16898637430922,0.982794975566015,2.24862112384854,2.63718157805054,5.06472035480075,3.31013607315846,3.74004978686054,9.89024883327716,9.60964946158285,33.0666875012915,21.2120340171047,16.5379966750717,26.0156244285525,20.6307025550199,26.5343936749852,4.98833613449833,2.08440552947533,2.93336957595647,2.37643120085263,3.52035372432753,4.69017520837084,8.56957107189649,14.8301572371927,6.14777062014145,7.0868700687608,8.29164797018933,7.53771247692395,11.2245238212832,9.9807850421243,0,0,2.45882136509518,6.34654516500885,8.83028244932856,10.1974167335217,1.47541450839008,2.01976741763498,1.26203287766503,1.17131623288992,0.430846795465598,1.19484398976276,0.222798674082394,1.13230612315533,2.42886421004937,1.46127928955656,0.790575555893047,6.74774764485795,4.11626247103979,2.13678724400706,2.60619134965722,2.47455184458803,1.32745138339963,1.21390318077491,1.51161778482376,1.50884063804718,1.77181135728464,0.922305443831782,2.58428293168221,0.727067458955011,0.356497378384721,2.21225730555071,0,0,2.38307724027652,5.40183282093931,8.27895576209629,9.64516657642165,9.75371285032505,9.45354733290974,5.43011767986999,6.08929898229199,15.9576761483323,4.02480934641258,3.30792597082443,23.0840754118072,10.8181165886257,17.7319999288778,23.7550964566242,25.9342621597197,5.53813589596716,6.67531087237835,0.683483523191411,1.03193433981611,1.11116716421827,0.376736914009382,0.27338845544205,0.457556346413045,1.01987057996313,1.25956307091292,0.967399816630967,2.86401185404534,2.05618395827738,5.69294507955176,8.10040056163509,7.52717865652087,5.24070152990826,7.01294601201068,8.84391976261094,7.32916637555283,1.42576470620972,2.4853572523477,0,6.42921147989109,6.6183396182839,10.1114617938905,9.81614658430756,7.26511339610346,4.92900402312167,5.07797100891405,2.09718688851422,0.966336483304024,0.288030006257865,9.48033361884535,15.0016659314722,11.8117600739551,10.0039033692902,8.41425469637163,6.75516606256301,7.45211787023807,6.79371825003055,4.74542314756294,5.63930369246999,5.04130925684203,8.08900410139945,5.67649865677944,7.94762934834669,19.9522737581386,0.443971906748129,0.269141569828427,0.671538465456314,13.9096507703177,4.31669693537719,1.09890974560359,58.3081991095059,2.00628841614145,5.64751842617067,7.36520378411483,5.15605962095457,5.499301834998,5.48066015816514,7.55393897389701,4.72515750162264,4.05289082901798,3.17199686288943,4.65984280576638,1.66059756134683,4.78829848081237,3.58540572083682,6.07766792670735,2.93458427679175,3.49302666055027,4.66718128383392,3.5025959730612,4.81378814387723,5.30664144703975,3.8021894983536,4.33840585187975,5.3375659257833,5.6342134116285,4.93945033018274,7.62069906052918,5.79421629724277,5.01563973205633,4.53294490883637,4.56316652416632,1.02860775715625,3.19456451086807,4.5302876089991,3.19762116591123,6.21121910741182,4.06150117880047,4.39027134894654,3.15683653725411,5.97538100921792,2.80571135828869,5.57584585183618,5.02372860115374,3.27384834535751,5.42278944150881,7.52335782826451,12.4905288968973,9.12333272937093,10.7435527024149,3.25190164517034,6.83833399270498,2.08681052058379
|phase1_expression=8.64803774365887,7.32848356042658,13.6499771816861,18.4503168897166,16.5295590882295,21.1527882608981,17.5209480446644,0.129123323441576,0.985521055061667,1.87251621057595,0,0.159544317990673,0.171200729931206,0,0.666219523631325,0.404950534779652,0,0.788655413395594,0.822686601634433,0.42438965179803,6.80346321208558,0,0,5.59973479776923,6.19405058881359,9.18771142584032,13.3536218809313,11.8509177977239,2.47030445293286,5.04060259519861,11.0865255327652,0,0,0,2.59966457776147,2.99222361645286,4.28755648150975,0,0,0,0,0,0.485510353031154,2.7697299954627,2.12891555560981,3.48738829107195,11.7358701652206,2.39827672018491,1.75748946187577,4.08302788055995,4.61955191363696,7.18762821824858,0.838913030288682,0,0,3.8588915405392,1.71920063963254,2.57836046138721,10.7227724255587,7.93486468908049,11.4089652631112,13.2149367506962,8.00365316500025,0.899899717281399,1.97773272513395,3.5524005747305,5.99200221036809,4.61061966385865,5.59923906465779,4.59020190327748,4.20649922702764,18.2816630018434,14.7981922437581,5.63457676388789,5.46319184803947,4.5960939330501,6.60695285996332,10.3426743849002,8.44835932909339,10.2871304429551,10.6125666578795,16.6692278578163,10.3297709630511,9.00420176050688,11.7654650788144,14.7314292736834,17.938831780687,10.4383689662168,5.75519069332199,3.70300644523249,0.579728977403356,16.3480536626463,19.7191686775248,30.2233787317178,20.1430689408777,15.2329141613094,6.46044332606059,0.852151612890289,0.779358013808606,0,8.45060518660083,1.28326477414318,0,0,7.14420435337007,7.60079596425296,4.04419556011827,12.4460428893775,0.258937883647172,4.45326417194474,4.16364784238726,3.04465478312141,2.99800146432876,1.65794904607885,1.29347577849275,2.63899841792318,11.6181634835156,0.722996784599558,0,1.94120219936891,1.32504911076236,0,1.86391761218122,6.73395833126558,7.33063473847093,4.08731288333746,0.11981512450592,0,0.127070227073065,6.29120685500255,2.28750301409313,10.0523481690292,6.95297280769106,8.43861009190091,5.81806524766768,9.89671704713322,2.03678727700633,1.36847667671102,3.28539585963777,7.99679052368601,10.539755879979,7.58676944630461,8.10279584124071,7.38453607395004,10.1374383735478,8.58361925908494,11.2442069471675,15.78090561508,3.66465587985832,3.59301552318857,4.57472922826267,7.89104636739269,9.17555922444473,12.1888258282758,10.0833246839892,2.9855140022774,0.702213187313235,0,0.284163499395593,2.48550927042602,0.938104239924385,0.540186184383045,0.710234206755631,0.787056926989615,0,0,1.3413670069981,0.467061369468678,1.15191894939436,0.32833492815819,0.56748166682099,0.877199924551994,0.658650345873152,0.939444931322602,5.88811855979556,5.45394445610208,6.93879444265976,4.49565963328025,1.2797295032114,1.39342003116263,2.96395161040815,2.62188582010345,4.22518283305254,3.23383564391351,7.59246498471219,6.0938613247884,7.03738584640755,6.76452004939913,4.09424582950152,2.69645822596266,3.8904848977445,2.78797782556114,1.13800740571849,2.74196430263349,6.76246414038483,2.44381593414377,3.49114476901726,4.1380133735288,4.3000845244495,5.31396532726568,5.49495547444812,7.65062416315163,18.0836102523161,2.16898637430922,0.982794975566015,2.24862112384854,2.63718157805054,5.06472035480075,3.31013607315846,3.74004978686054,9.89024883327716,9.60964946158285,33.0666875012915,21.2120340171047,16.5379966750717,26.0156244285525,20.6307025550199,26.5343936749852,4.98833613449833,2.08440552947533,2.93336957595647,2.37643120085263,3.52035372432753,4.69017520837084,8.56957107189649,14.8301572371927,6.14777062014145,7.0868700687608,8.29164797018933,7.53771247692395,11.2245238212832,9.9807850421243,0,0,2.45882136509518,6.34654516500885,8.83028244932856,10.1974167335217,1.47541450839008,2.01976741763498,1.26203287766503,1.17131623288992,0.430846795465598,1.19484398976276,0.222798674082394,1.13230612315533,2.42886421004937,1.46127928955656,0.790575555893047,6.74774764485795,4.11626247103979,2.13678724400706,2.60619134965722,2.47455184458803,1.32745138339963,1.21390318077491,1.51161778482376,1.50884063804718,1.77181135728464,0.922305443831782,2.58428293168221,0.727067458955011,0.356497378384721,2.21225730555071,0,0,2.38307724027652,5.40183282093931,8.27895576209629,9.64516657642165,9.75371285032505,9.45354733290974,5.43011767986999,6.08929898229199,15.9576761483323,4.02480934641258,3.30792597082443,23.0840754118072,10.8181165886257,17.7319999288778,23.7550964566242,25.9342621597197,5.53813589596716,6.67531087237835,0.683483523191411,1.03193433981611,1.11116716421827,0.376736914009382,0.27338845544205,0.457556346413045,1.01987057996313,1.25956307091292,0.967399816630967,2.86401185404534,2.05618395827738,5.69294507955176,8.10040056163509,7.52717865652087,5.24070152990826,7.01294601201068,8.84391976261094,7.32916637555283,1.42576470620972,2.4853572523477,0,6.42921147989109,6.6183396182839,10.1114617938905,9.81614658430756,7.26511339610346,4.92900402312167,5.07797100891405,2.09718688851422,0.966336483304024,0.288030006257865,9.48033361884535,15.0016659314722,11.8117600739551,10.0039033692902,8.41425469637163,6.75516606256301,7.45211787023807,6.79371825003055,4.74542314756294,5.63930369246999,5.04130925684203,8.08900410139945,5.67649865677944,7.94762934834669,19.9522737581386,0.443971906748129,0.269141569828427,0.671538465456314,13.9096507703177,4.31669693537719,1.09890974560359,58.3081991095059,2.00628841614145,5.64751842617067,7.36520378411483,5.15605962095457,5.499301834998,5.48066015816514,7.55393897389701,4.72515750162264,4.05289082901798,3.17199686288943,4.65984280576638,1.66059756134683,4.78829848081237,3.58540572083682,6.07766792670735,2.93458427679175,3.49302666055027,4.66718128383392,3.5025959730612,4.81378814387723,5.30664144703975,3.8021894983536,4.33840585187975,5.3375659257833,5.6342134116285,4.93945033018274,7.62069906052918,5.79421629724277,5.01563973205633,4.53294490883637,4.56316652416632,1.02860775715625,3.19456451086807,4.5302876089991,3.19762116591123,6.21121910741182,4.06150117880047,4.39027134894654,3.15683653725411,5.97538100921792,2.80571135828869,5.57584585183618,5.02372860115374,3.27384834535751,5.42278944150881,7.52335782826451,12.4905288968973,9.12333272937093,10.7435527024149,3.25190164517034,6.83833399270498,2.08681052058379
|short_description=p@chr9:43552057..43552102,+
|short_description=p@chr9:43552057..43552102,+
}}
}}

Latest revision as of 03:21, 5 August 2015

Short description:p@chr9:43552057..43552102, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:43552057..43552102, +
Coexpression cluster:MCL_coexpression_mm9:2495
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:43552057..43552102+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.45
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.52
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.22
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.45
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C610.54
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D47.38
eyeball, neonate N00.CNhs11207.633-15C610.14
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G811.24
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D54.30
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B218.08
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A326.02
liver, neonate N25.CNhs11198.1368-26H120.63
liver, neonate N30.CNhs11106.1382-42D126.53
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C614.83
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C711.22
lung, neonate N30.CNhs11133.1394-42H29.98
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A310.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I715.96
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C323.08
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H317.73
skin, neonate N06.CNhs11097.693-20I523.76
skin, neonate N10.CNhs11108.762-6C425.93
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C56.62
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I59.82
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I211.81
thymus, embryo E16.CNhs11002.456-26C510.00
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F87.45
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D35.64
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A28.09
thymus, neonate N25.CNhs11125.1362-25G75.68
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B419.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E413.91
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D558.31
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.72e-0723
neuroblast (sensu Vertebrata)4.72e-0723

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.06e-1195
ectoderm8.06e-1195
presumptive ectoderm8.06e-1195
ecto-epithelium8.60e-1173
organ system subdivision2.41e-10194
cell layer1.39e-08176
neurectoderm4.20e-0864
neural plate4.20e-0864
presumptive neural plate4.20e-0864
epithelium5.21e-08174
regional part of nervous system1.67e-0754
neural tube6.19e-0752
neural rod6.19e-0752
future spinal cord6.19e-0752
neural keel6.19e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:43552057..43552102,%2B&oldid=3853177"