FFCP PHASE1:Mm9::chr6:145070282..145070315,+: Difference between revisions
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{{FFCP|EntrezGene=16970|HGNC=|MCL_coexpression_id=1306|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143631_5end|description=CAGE_peak_1_at_Lrmp_5end|id=chr6:145070282..145070315,+|ontology_enrichment_celltype=CL:0000988!4.59e-12!32;CL:0002032!4.59e-12!32;CL:0000037!4.59e-12!32;CL:0000566!4.59e-12!32;CL:0000837!4.59e-12!32;CL:0002031!3.42e-10!25;CL:0000049!3.45e-07!19;CL:0000838!5.99e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,3.96e-14,32;CL:0002032,3.96e-14,32;CL:0000037,3.96e-14,32;CL:0000837,3.96e-14,32;CL:0002031,7.32e-12,25;CL:0002320,4.57e-09,46;CL:0000134,4.57e-09,46;CL:0000049,3.17e-08,19;CL:0000838,3.98e-08,12;CL:0000084,2.64e-07,11;CL:0000827,2.64e-07,11;CL:0000738,3.81e-07,17;CL:0002087,3.81e-07,17;CL:0000542,4.02e-07,13;CL:0000051,4.02e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.70e-18!48;UBERON:0002405!8.74e-18!70;UBERON:0002390!5.57e-17!45;UBERON:0003061!5.57e-17!45;UBERON:0004177!4.74e-11!29;UBERON:0005057!9.93e-11!51;UBERON:0001041!6.13e-10!92;UBERON:0003081!1.06e-09!88;UBERON:0000077!4.88e-09!97;UBERON:0003408!1.43e-08!24;UBERON:0002370!2.01e-08!23;UBERON:0000974!2.01e-08!23;UBERON:0004807!2.01e-08!23;UBERON:0005058!2.01e-08!23;UBERON:0003351!2.01e-08!23;UBERON:0009113!2.01e-08!23;UBERON:0003295!2.01e-08!23;UBERON:0009722!2.01e-08!23;UBERON:0005562!2.01e-08!23;UBERON:0007690!2.01e-08!23;UBERON:0000949!3.29e-08!72;UBERON:0006562!5.59e-08!24;UBERON:0001557!5.59e-08!24;UBERON:0001042!5.59e-08!24;UBERON:0008814!5.59e-08!24;UBERON:0009145!5.59e-08!24;UBERON:0000926!1.66e-07!193;UBERON:0004120!1.66e-07!193;UBERON:0006603!1.66e-07!193;UBERON:0001474!6.36e-07!22;UBERON:0004765!6.36e-07!22;UBERON:0001434!6.36e-07!22;UBERON:0001007!8.13e-07!128;UBERON:0001555!8.13e-07!128;UBERON:0007026!8.13e-07!128;UBERON:0002371!8.36e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.62e-22,48;UBERON:0002405,2.62e-22,48;UBERON:0002390,5.37e-21,45;UBERON:0003061,5.37e-21,45;UBERON:0004177,2.17e-14,29;UBERON:0005057,2.17e-14,29;UBERON:0000077,1.66e-11,35;UBERON:0003408,2.63e-11,24;UBERON:0002370,3.85e-11,23;UBERON:0000974,3.85e-11,23;UBERON:0004807,3.85e-11,23;UBERON:0005058,3.85e-11,23;UBERON:0003351,3.85e-11,23;UBERON:0009113,3.85e-11,23;UBERON:0003295,3.85e-11,23;UBERON:0009722,3.85e-11,23;UBERON:0005562,3.85e-11,23;UBERON:0007690,3.85e-11,23;UBERON:0006562,2.72e-10,24;UBERON:0001557,2.72e-10,24;UBERON:0001042,2.72e-10,24;UBERON:0008814,2.72e-10,24;UBERON:0009145,2.72e-10,24;UBERON:0003081,4.87e-10,87;UBERON:0002384,4.57e-09,46;UBERON:0000072,3.58e-08,27;UBERON:0001474,5.59e-08,22;UBERON:0004765,5.59e-08,22;UBERON:0001434,5.59e-08,22;UBERON:0001041,7.41e-08,80;UBERON:0000949,8.11e-08,72;UBERON:0001004,1.00e-07,42;UBERON:0000065,1.62e-07,41;UBERON:0002371,2.38e-07,16|phase1_expression=0.160148847104794,0,0,0,0,0,0,21.5635950147432,16.1907030474417,6.55380673701582,16.7793608860995,3.19088635981346,17.6336751829142,12.8507991555926,10.6595123781012,15.9955461237963,9.79386629379405,100.790161831957,92.2780138166622,81.4828131452218,2.63634199468316,51.2341308196568,60.8595508693719,2.71987118748791,3.44113921600755,0,0,0,0.380046838912748,1.26015064879965,0.886922042621219,12.7006134691926,15.9916844771988,0,0,0.332469290716985,0.612508068787107,46.8755426425337,25.0027310247616,49.211231933537,36.4703522579229,40.9827290975067,47.5800145970531,0,0,0,0,0,0,0,0,0,94.4616072105056,23.211588544363,33.6093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0,0,5.84934816232909,2.96659908770092,4.2628806896766,0.898800331555214,1.92109152660777,0.207379224616955,0.135005938331691,0,0.571301968807607,0.662605622854841,0.244981598429908,0,0,0,0.383062014255563,0.153606533256243,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0.151452386666368,0.226714680320357,3.47837386442013,0,0,0,0.649776417447669,0,8.00533194750986,0,0,0,0,0,0,0,0,0,0,5.59501010623394,54.6358934495532,1.48442139064825,0.693941307064543,0.608930956624282,0.461230994512117,1.20578112442098,1.17588707135705,0.879666139307728,0.247194967734374,1.73519228303894,30.0767587662957,3.72063754879041,40.1931563597916,43.63877278217,1.86391761218122,0,0,1.78819938646014,18.4515291739117,14.9975682748352,17.0274104277907,0,0.457500602818626,0,0.521472960576829,0.767146371990992,0,0.973447578406546,0.611036183101898,37.6953120948582,0.252722758433675,0.841767423545896,0.130120442962704,0,0,0.60281927134286,0.204109497453984,0,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0,0.43839146485515,0.834141747676794,3.1342694986995,1.23469281844766,0.59710280045548,12.6398373716382,13.3820911699652,12.2190304740105,0.621377317606506,0.234526059981096,0.540186184383045,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0,0.817357396570186,0.16455984991348,0.820837320395476,1.78351381000883,1.46199987425332,1.97595103761946,1.47627060636409,0.210289948564127,0.102904612379284,6.277956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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16970 | |||
|HGNC= | |||
|MCL_coexpression_id=1306 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000143631_5end | |||
|cluster_id=chr6:145070282..145070315,+ | |||
|description=CAGE_peak_1_at_Lrmp_5end | |||
|id=chr6:145070282..145070315,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.59e-12!32;CL:0002032!4.59e-12!32;CL:0000037!4.59e-12!32;CL:0000566!4.59e-12!32;CL:0000837!4.59e-12!32;CL:0002031!3.42e-10!25;CL:0000049!3.45e-07!19;CL:0000838!5.99e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.96e-14,32;CL:0002032,3.96e-14,32;CL:0000037,3.96e-14,32;CL:0000837,3.96e-14,32;CL:0002031,7.32e-12,25;CL:0002320,4.57e-09,46;CL:0000134,4.57e-09,46;CL:0000049,3.17e-08,19;CL:0000838,3.98e-08,12;CL:0000084,2.64e-07,11;CL:0000827,2.64e-07,11;CL:0000738,3.81e-07,17;CL:0002087,3.81e-07,17;CL:0000542,4.02e-07,13;CL:0000051,4.02e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.70e-18!48;UBERON:0002405!8.74e-18!70;UBERON:0002390!5.57e-17!45;UBERON:0003061!5.57e-17!45;UBERON:0004177!4.74e-11!29;UBERON:0005057!9.93e-11!51;UBERON:0001041!6.13e-10!92;UBERON:0003081!1.06e-09!88;UBERON:0000077!4.88e-09!97;UBERON:0003408!1.43e-08!24;UBERON:0002370!2.01e-08!23;UBERON:0000974!2.01e-08!23;UBERON:0004807!2.01e-08!23;UBERON:0005058!2.01e-08!23;UBERON:0003351!2.01e-08!23;UBERON:0009113!2.01e-08!23;UBERON:0003295!2.01e-08!23;UBERON:0009722!2.01e-08!23;UBERON:0005562!2.01e-08!23;UBERON:0007690!2.01e-08!23;UBERON:0000949!3.29e-08!72;UBERON:0006562!5.59e-08!24;UBERON:0001557!5.59e-08!24;UBERON:0001042!5.59e-08!24;UBERON:0008814!5.59e-08!24;UBERON:0009145!5.59e-08!24;UBERON:0000926!1.66e-07!193;UBERON:0004120!1.66e-07!193;UBERON:0006603!1.66e-07!193;UBERON:0001474!6.36e-07!22;UBERON:0004765!6.36e-07!22;UBERON:0001434!6.36e-07!22;UBERON:0001007!8.13e-07!128;UBERON:0001555!8.13e-07!128;UBERON:0007026!8.13e-07!128;UBERON:0002371!8.36e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.62e-22,48;UBERON:0002405,2.62e-22,48;UBERON:0002390,5.37e-21,45;UBERON:0003061,5.37e-21,45;UBERON:0004177,2.17e-14,29;UBERON:0005057,2.17e-14,29;UBERON:0000077,1.66e-11,35;UBERON:0003408,2.63e-11,24;UBERON:0002370,3.85e-11,23;UBERON:0000974,3.85e-11,23;UBERON:0004807,3.85e-11,23;UBERON:0005058,3.85e-11,23;UBERON:0003351,3.85e-11,23;UBERON:0009113,3.85e-11,23;UBERON:0003295,3.85e-11,23;UBERON:0009722,3.85e-11,23;UBERON:0005562,3.85e-11,23;UBERON:0007690,3.85e-11,23;UBERON:0006562,2.72e-10,24;UBERON:0001557,2.72e-10,24;UBERON:0001042,2.72e-10,24;UBERON:0008814,2.72e-10,24;UBERON:0009145,2.72e-10,24;UBERON:0003081,4.87e-10,87;UBERON:0002384,4.57e-09,46;UBERON:0000072,3.58e-08,27;UBERON:0001474,5.59e-08,22;UBERON:0004765,5.59e-08,22;UBERON:0001434,5.59e-08,22;UBERON:0001041,7.41e-08,80;UBERON:0000949,8.11e-08,72;UBERON:0001004,1.00e-07,42;UBERON:0000065,1.62e-07,41;UBERON:0002371,2.38e-07,16 | |||
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| |||
|short_description=p1@Lrmp | |||
}} |
Revision as of 09:47, 5 August 2015
Short description: | p1@Lrmp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrmp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1306 |
Association with transcript: | 0bp_to_ENSMUST00000143631_5end |
EntrezGene: | 16970 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.96e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.96e-14 | 32 |
hematopoietic stem cell | 3.96e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.96e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 7.32e-12 | 25 |
connective tissue cell | 4.57e-09 | 46 |
mesenchymal cell | 4.57e-09 | 46 |
common myeloid progenitor | 3.17e-08 | 19 |
lymphoid lineage restricted progenitor cell | 3.98e-08 | 12 |
T cell | 2.64e-07 | 11 |
pro-T cell | 2.64e-07 | 11 |
leukocyte | 3.81e-07 | 17 |
nongranular leukocyte | 3.81e-07 | 17 |
lymphocyte | 4.02e-07 | 13 |
common lymphoid progenitor | 4.02e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.62e-22 | 48 |
immune system | 2.62e-22 | 48 |
hematopoietic system | 5.37e-21 | 45 |
blood island | 5.37e-21 | 45 |
hemopoietic organ | 2.17e-14 | 29 |
immune organ | 2.17e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 1.66e-11 | 35 |
gland of gut | 2.63e-11 | 24 |
thymus | 3.85e-11 | 23 |
neck | 3.85e-11 | 23 |
respiratory system epithelium | 3.85e-11 | 23 |
hemolymphoid system gland | 3.85e-11 | 23 |
pharyngeal epithelium | 3.85e-11 | 23 |
thymic region | 3.85e-11 | 23 |
pharyngeal gland | 3.85e-11 | 23 |
entire pharyngeal arch endoderm | 3.85e-11 | 23 |
thymus primordium | 3.85e-11 | 23 |
early pharyngeal endoderm | 3.85e-11 | 23 |
pharynx | 2.72e-10 | 24 |
upper respiratory tract | 2.72e-10 | 24 |
chordate pharynx | 2.72e-10 | 24 |
pharyngeal arch system | 2.72e-10 | 24 |
pharyngeal region of foregut | 2.72e-10 | 24 |
lateral plate mesoderm | 4.87e-10 | 87 |
connective tissue | 4.57e-09 | 46 |
segment of respiratory tract | 3.58e-08 | 27 |
bone element | 5.59e-08 | 22 |
skeletal element | 5.59e-08 | 22 |
skeletal system | 5.59e-08 | 22 |
foregut | 7.41e-08 | 80 |
endocrine system | 8.11e-08 | 72 |
respiratory system | 1.00e-07 | 42 |
respiratory tract | 1.62e-07 | 41 |
bone marrow | 2.38e-07 | 16 |