FFCP PHASE1:Mm9::chr11:115939740..115939778,-: Difference between revisions
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{{FFCP|EntrezGene=70450|HGNC=|MCL_coexpression_id=6|UniProt=B2RUP2,Q80UG7|association_with_transcript=-465bp_to_ENSMUST00000075036,ENSMUST00000106451,ENSMUST00000155120,NM_001009573,uc007mjt.1,uc007mju.1_5end|description=CAGE_peak_7_at_Unc13d_5end|id=chr11:115939740..115939778,-|ontology_enrichment_celltype=CL:0000988!2.18e-15!32;CL:0002032!2.18e-15!32;CL:0000037!2.18e-15!32;CL:0000566!2.18e-15!32;CL:0000837!2.18e-15!32;CL:0002031!1.69e-14!25;CL:0002320!2.31e-09!46;CL:0000134!2.31e-09!46;CL:0000049!5.47e-09!19;CL:0000838!1.24e-08!12;CL:0000084!4.04e-08!11;CL:0000827!4.04e-08!11;CL:0000738!7.51e-08!17;CL:0002087!7.51e-08!17;CL:0000763!1.10e-07!16;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000839!3.15e-07!13;CL:0000050!3.63e-07!9;CL:0000791!4.78e-07!9;CL:0000789!4.78e-07!9;CL:0002420!4.78e-07!9;CL:0002419!4.78e-07!9;CL:0000790!4.78e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.59e-18,32;CL:0002032,3.59e-18,32;CL:0000037,3.59e-18,32;CL:0000837,3.59e-18,32;CL:0002031,2.42e-17,25;CL:0000838,3.91e-13,12;CL:0000542,5.82e-12,13;CL:0000051,5.82e-12,13;CL:0000084,5.98e-12,11;CL:0000827,5.98e-12,11;CL:0002320,4.37e-11,46;CL:0000134,4.37e-11,46;CL:0000050,1.26e-09,9;CL:0000791,1.67e-09,9;CL:0000789,1.67e-09,9;CL:0002420,1.67e-09,9;CL:0002419,1.67e-09,9;CL:0000790,1.67e-09,9;CL:0000219,1.01e-08,54;CL:0000738,1.17e-08,17;CL:0002087,1.17e-08,17;CL:0000763,3.84e-08,16;CL:0000049,5.21e-08,19;CL:0000624,6.63e-08,8;CL:0000553,1.59e-07,6;CL:0000556,1.59e-07,6;CL:0000034,1.83e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,4.68e-09,6;DOID:0060100,2.23e-07,3;DOID:4045,2.23e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.05e-17!48;UBERON:0002390!3.80e-17!45;UBERON:0003061!3.80e-17!45;UBERON:0004177!2.20e-13!29;UBERON:0002405!5.28e-12!70;UBERON:0003408!5.53e-11!24;UBERON:0002370!1.60e-10!23;UBERON:0000974!1.60e-10!23;UBERON:0004807!1.60e-10!23;UBERON:0005058!1.60e-10!23;UBERON:0003351!1.60e-10!23;UBERON:0009113!1.60e-10!23;UBERON:0003295!1.60e-10!23;UBERON:0009722!1.60e-10!23;UBERON:0005562!1.60e-10!23;UBERON:0007690!1.60e-10!23;UBERON:0001004!2.50e-10!42;UBERON:0000065!6.77e-10!41;UBERON:0006562!1.02e-09!24;UBERON:0001557!1.02e-09!24;UBERON:0001042!1.02e-09!24;UBERON:0008814!1.02e-09!24;UBERON:0009145!1.02e-09!24;UBERON:0002384!2.31e-09!46;UBERON:0000072!1.07e-08!27;UBERON:0005057!1.67e-07!51;UBERON:0003081!1.84e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.10e-19,48;UBERON:0002405,1.10e-19,48;UBERON:0002390,2.17e-19,45;UBERON:0003061,2.17e-19,45;UBERON:0004177,4.48e-16,29;UBERON:0005057,4.48e-16,29;UBERON:0002370,8.48e-15,23;UBERON:0000974,8.48e-15,23;UBERON:0004807,8.48e-15,23;UBERON:0005058,8.48e-15,23;UBERON:0003351,8.48e-15,23;UBERON:0009113,8.48e-15,23;UBERON:0003295,8.48e-15,23;UBERON:0009722,8.48e-15,23;UBERON:0005562,8.48e-15,23;UBERON:0007690,8.48e-15,23;UBERON:0006562,5.04e-14,24;UBERON:0003408,5.04e-14,24;UBERON:0001557,5.04e-14,24;UBERON:0001042,5.04e-14,24;UBERON:0008814,5.04e-14,24;UBERON:0009145,5.04e-14,24;UBERON:0000077,1.54e-12,35;UBERON:0000072,4.72e-12,27;UBERON:0002384,4.37e-11,46;UBERON:0007811,3.84e-08,36;UBERON:0003081,8.22e-08,87;UBERON:0000065,9.39e-08,41;UBERON:0001004,1.76e-07,42|phase1_expression=0.160148847104794,0,0,0,0,0,0,4.77756296733832,1.267098499365,1.63845168425395,0.513653904676515,0.717949430958028,3.0816131387617,3.93391810885488,1.66554880907831,1.82227740650843,0.699561878128147,2.83915948822414,3.56497527374921,1.27316895539409,0.0850432901510698,1.58865521921416,1.04479915655574,0,0.91763712426868,0,0,0,0,0,0.443461021310609,2.54012269383853,0.61506478758457,15.8481681015439,0,0,0,19.6709866446347,7.0320181007142,8.37637990358077,35.2938892818609,12.294818729252,8.73918635456076,0,0,0,0,0,0,0,0.139986421625363,0,1.17447824240415,1.45072428402269,3.02484419228218,0,0,0,0,0,1.26766280701236,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0,0,0,0.372798891650601,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,4.66088190564909,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,1.31796636956512,0.599902730993408,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0,1.49288364732112,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,2.05878325691772,2.55747149456033,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,0.54390568381871,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0,1.70870880797853,0.619160603889667,0.555583582109135,1.50694765603753,0.27338845544205,1.14389086603261,2.71965487990169,1.95932033253121,2.07299960706636,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,2.52808896502543,0.405450430580328,0.821687657318618,0.51968329191118,1.79026695667481,2.18549490259391,1.80293174279953,1.32920574457119,1.9183625490148,2.28620419965,1.91569751759997,2.14407337627455,3.17499077413087,2.33753804363138,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p7@Unc13d}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70450 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RUP2,uniprot:Q80UG7 | |||
|association_with_transcript=-465bp_to_ENSMUST00000075036,ENSMUST00000106451,ENSMUST00000155120,NM_001009573,uc007mjt.1,uc007mju.1_5end | |||
|cluster_id=chr11:115939740..115939778,- | |||
|description=CAGE_peak_7_at_Unc13d_5end | |||
|id=chr11:115939740..115939778,- | |||
|ontology_enrichment_celltype=CL:0000988!2.18e-15!32;CL:0002032!2.18e-15!32;CL:0000037!2.18e-15!32;CL:0000566!2.18e-15!32;CL:0000837!2.18e-15!32;CL:0002031!1.69e-14!25;CL:0002320!2.31e-09!46;CL:0000134!2.31e-09!46;CL:0000049!5.47e-09!19;CL:0000838!1.24e-08!12;CL:0000084!4.04e-08!11;CL:0000827!4.04e-08!11;CL:0000738!7.51e-08!17;CL:0002087!7.51e-08!17;CL:0000763!1.10e-07!16;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000839!3.15e-07!13;CL:0000050!3.63e-07!9;CL:0000791!4.78e-07!9;CL:0000789!4.78e-07!9;CL:0002420!4.78e-07!9;CL:0002419!4.78e-07!9;CL:0000790!4.78e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.59e-18,32;CL:0002032,3.59e-18,32;CL:0000037,3.59e-18,32;CL:0000837,3.59e-18,32;CL:0002031,2.42e-17,25;CL:0000838,3.91e-13,12;CL:0000542,5.82e-12,13;CL:0000051,5.82e-12,13;CL:0000084,5.98e-12,11;CL:0000827,5.98e-12,11;CL:0002320,4.37e-11,46;CL:0000134,4.37e-11,46;CL:0000050,1.26e-09,9;CL:0000791,1.67e-09,9;CL:0000789,1.67e-09,9;CL:0002420,1.67e-09,9;CL:0002419,1.67e-09,9;CL:0000790,1.67e-09,9;CL:0000219,1.01e-08,54;CL:0000738,1.17e-08,17;CL:0002087,1.17e-08,17;CL:0000763,3.84e-08,16;CL:0000049,5.21e-08,19;CL:0000624,6.63e-08,8;CL:0000553,1.59e-07,6;CL:0000556,1.59e-07,6;CL:0000034,1.83e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,4.68e-09,6;DOID:0060100,2.23e-07,3;DOID:4045,2.23e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.05e-17!48;UBERON:0002390!3.80e-17!45;UBERON:0003061!3.80e-17!45;UBERON:0004177!2.20e-13!29;UBERON:0002405!5.28e-12!70;UBERON:0003408!5.53e-11!24;UBERON:0002370!1.60e-10!23;UBERON:0000974!1.60e-10!23;UBERON:0004807!1.60e-10!23;UBERON:0005058!1.60e-10!23;UBERON:0003351!1.60e-10!23;UBERON:0009113!1.60e-10!23;UBERON:0003295!1.60e-10!23;UBERON:0009722!1.60e-10!23;UBERON:0005562!1.60e-10!23;UBERON:0007690!1.60e-10!23;UBERON:0001004!2.50e-10!42;UBERON:0000065!6.77e-10!41;UBERON:0006562!1.02e-09!24;UBERON:0001557!1.02e-09!24;UBERON:0001042!1.02e-09!24;UBERON:0008814!1.02e-09!24;UBERON:0009145!1.02e-09!24;UBERON:0002384!2.31e-09!46;UBERON:0000072!1.07e-08!27;UBERON:0005057!1.67e-07!51;UBERON:0003081!1.84e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.10e-19,48;UBERON:0002405,1.10e-19,48;UBERON:0002390,2.17e-19,45;UBERON:0003061,2.17e-19,45;UBERON:0004177,4.48e-16,29;UBERON:0005057,4.48e-16,29;UBERON:0002370,8.48e-15,23;UBERON:0000974,8.48e-15,23;UBERON:0004807,8.48e-15,23;UBERON:0005058,8.48e-15,23;UBERON:0003351,8.48e-15,23;UBERON:0009113,8.48e-15,23;UBERON:0003295,8.48e-15,23;UBERON:0009722,8.48e-15,23;UBERON:0005562,8.48e-15,23;UBERON:0007690,8.48e-15,23;UBERON:0006562,5.04e-14,24;UBERON:0003408,5.04e-14,24;UBERON:0001557,5.04e-14,24;UBERON:0001042,5.04e-14,24;UBERON:0008814,5.04e-14,24;UBERON:0009145,5.04e-14,24;UBERON:0000077,1.54e-12,35;UBERON:0000072,4.72e-12,27;UBERON:0002384,4.37e-11,46;UBERON:0007811,3.84e-08,36;UBERON:0003081,8.22e-08,87;UBERON:0000065,9.39e-08,41;UBERON:0001004,1.76e-07,42 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,4.77756296733832,1.267098499365,1.63845168425395,0.513653904676515,0.717949430958028,3.0816131387617,3.93391810885488,1.66554880907831,1.82227740650843,0.699561878128147,2.83915948822414,3.56497527374921,1.27316895539409,0.0850432901510698,1.58865521921416,1.04479915655574,0,0.91763712426868,0,0,0,0,0,0.443461021310609,2.54012269383853,0.61506478758457,15.8481681015439,0,0,0,19.6709866446347,7.0320181007142,8.37637990358077,35.2938892818609,12.294818729252,8.73918635456076,0,0,0,0,0,0,0,0.139986421625363,0,1.17447824240415,1.45072428402269,3.02484419228218,0,0,0,0,0,1.26766280701236,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0,0,0,0.372798891650601,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,4.66088190564909,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,1.31796636956512,0.599902730993408,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0,1.49288364732112,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,2.05878325691772,2.55747149456033,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,0.54390568381871,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0,1.70870880797853,0.619160603889667,0.555583582109135,1.50694765603753,0.27338845544205,1.14389086603261,2.71965487990169,1.95932033253121,2.07299960706636,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,2.52808896502543,0.405450430580328,0.821687657318618,0.51968329191118,1.79026695667481,2.18549490259391,1.80293174279953,1.32920574457119,1.9183625490148,2.28620419965,1.91569751759997,2.14407337627455,3.17499077413087,2.33753804363138,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Unc13d | |||
}} |
Revision as of 11:35, 5 August 2015
Short description: | p7@Unc13d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Unc13d_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | -465bp_to_ENSMUST00000075036, ENSMUST00000106451, ENSMUST00000155120, NM_001009573, uc007mjt.1, uc007mju.1_5end |
EntrezGene: | 70450 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.59e-18 | 32 |
hematopoietic oligopotent progenitor cell | 3.59e-18 | 32 |
hematopoietic stem cell | 3.59e-18 | 32 |
hematopoietic multipotent progenitor cell | 3.59e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 2.42e-17 | 25 |
lymphoid lineage restricted progenitor cell | 3.91e-13 | 12 |
lymphocyte | 5.82e-12 | 13 |
common lymphoid progenitor | 5.82e-12 | 13 |
T cell | 5.98e-12 | 11 |
pro-T cell | 5.98e-12 | 11 |
connective tissue cell | 4.37e-11 | 46 |
mesenchymal cell | 4.37e-11 | 46 |
megakaryocyte-erythroid progenitor cell | 1.26e-09 | 9 |
mature alpha-beta T cell | 1.67e-09 | 9 |
alpha-beta T cell | 1.67e-09 | 9 |
immature T cell | 1.67e-09 | 9 |
mature T cell | 1.67e-09 | 9 |
immature alpha-beta T cell | 1.67e-09 | 9 |
motile cell | 1.01e-08 | 54 |
leukocyte | 1.17e-08 | 17 |
nongranular leukocyte | 1.17e-08 | 17 |
myeloid cell | 3.84e-08 | 16 |
common myeloid progenitor | 5.21e-08 | 19 |
CD4-positive, alpha-beta T cell | 6.63e-08 | 8 |
megakaryocyte progenitor cell | 1.59e-07 | 6 |
megakaryocyte | 1.59e-07 | 6 |
stem cell | 1.83e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.10e-19 | 48 |
immune system | 1.10e-19 | 48 |
hematopoietic system | 2.17e-19 | 45 |
blood island | 2.17e-19 | 45 |
hemopoietic organ | 4.48e-16 | 29 |
immune organ | 4.48e-16 | 29 |
thymus | 8.48e-15 | 23 |
neck | 8.48e-15 | 23 |
respiratory system epithelium | 8.48e-15 | 23 |
hemolymphoid system gland | 8.48e-15 | 23 |
pharyngeal epithelium | 8.48e-15 | 23 |
thymic region | 8.48e-15 | 23 |
pharyngeal gland | 8.48e-15 | 23 |
entire pharyngeal arch endoderm | 8.48e-15 | 23 |
thymus primordium | 8.48e-15 | 23 |
early pharyngeal endoderm | 8.48e-15 | 23 |
pharynx | 5.04e-14 | 24 |
gland of gut | 5.04e-14 | 24 |
upper respiratory tract | 5.04e-14 | 24 |
chordate pharynx | 5.04e-14 | 24 |
pharyngeal arch system | 5.04e-14 | 24 |
pharyngeal region of foregut | 5.04e-14 | 24 |
mixed endoderm/mesoderm-derived structure | 1.54e-12 | 35 |
segment of respiratory tract | 4.72e-12 | 27 |
connective tissue | 4.37e-11 | 46 |
craniocervical region | 3.84e-08 | 36 |
lateral plate mesoderm | 8.22e-08 | 87 |
respiratory tract | 9.39e-08 | 41 |
respiratory system | 1.76e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 4.68e-09 | 6 |
musculoskeletal system cancer | 2.23e-07 | 3 |
muscle cancer | 2.23e-07 | 3 |