FFCP PHASE1:Mm9::chr2:76053420..76053462,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=241489|HGNC=|MCL_coexpression_id=33|UniProt=F6SXR7|association_with_transcript=0bp_to_ENSMUST00000144892_5end|description=CAGE_peak_2_at_Pde11a_5end|id=chr2:76053420..76053462,-|ontology_enrichment_celltype=CL:0000791!9.68e-08!9;CL:0000789!9.68e-08!9;CL:0002420!9.68e-08!9;CL:0002419!9.68e-08!9;CL:0000790!9.68e-08!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.84e-13,9;CL:0000789,2.84e-13,9;CL:0002420,2.84e-13,9;CL:0002419,2.84e-13,9;CL:0000790,2.84e-13,9;CL:0000084,7.84e-11,11;CL:0000827,7.84e-11,11;CL:0000624,5.18e-10,8;CL:0000838,6.48e-10,12;CL:0000542,3.87e-09,13;CL:0000051,3.87e-09,13;CL:0000738,6.12e-07,17;CL:0002087,6.12e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.98e-19!29;UBERON:0002370!1.28e-18!23;UBERON:0000974!1.28e-18!23;UBERON:0004807!1.28e-18!23;UBERON:0005058!1.28e-18!23;UBERON:0003351!1.28e-18!23;UBERON:0009113!1.28e-18!23;UBERON:0003295!1.28e-18!23;UBERON:0009722!1.28e-18!23;UBERON:0005562!1.28e-18!23;UBERON:0007690!1.28e-18!23;UBERON:0006562!1.34e-17!24;UBERON:0003408!1.34e-17!24;UBERON:0001557!1.34e-17!24;UBERON:0001042!1.34e-17!24;UBERON:0008814!1.34e-17!24;UBERON:0009145!1.34e-17!24;UBERON:0002193!2.07e-15!48;UBERON:0002390!2.72e-15!45;UBERON:0003061!2.72e-15!45;UBERON:0000072!5.25e-15!27;UBERON:0000063!5.91e-13!35;UBERON:0000065!1.26e-12!41;UBERON:0001004!3.61e-12!42;UBERON:0005057!4.23e-09!51;UBERON:0002405!5.24e-09!70;UBERON:0003081!1.15e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.93e-38,23;UBERON:0000974,7.93e-38,23;UBERON:0004807,7.93e-38,23;UBERON:0005058,7.93e-38,23;UBERON:0003351,7.93e-38,23;UBERON:0009113,7.93e-38,23;UBERON:0003295,7.93e-38,23;UBERON:0009722,7.93e-38,23;UBERON:0005562,7.93e-38,23;UBERON:0007690,7.93e-38,23;UBERON:0006562,3.62e-36,24;UBERON:0003408,3.62e-36,24;UBERON:0001557,3.62e-36,24;UBERON:0001042,3.62e-36,24;UBERON:0008814,3.62e-36,24;UBERON:0009145,3.62e-36,24;UBERON:0000072,6.31e-32,27;UBERON:0004177,1.39e-29,29;UBERON:0005057,1.39e-29,29;UBERON:0000077,3.68e-24,35;UBERON:0007811,1.97e-23,36;UBERON:0002193,1.16e-22,48;UBERON:0002405,1.16e-22,48;UBERON:0002390,4.14e-21,45;UBERON:0003061,4.14e-21,45;UBERON:0000065,2.56e-20,41;UBERON:0001004,8.76e-20,42;UBERON:0000153,2.83e-19,43;UBERON:0003929,1.34e-14,55;UBERON:0002368,3.35e-13,60;UBERON:0002530,5.13e-12,65;UBERON:0000490,8.43e-12,66;UBERON:0005911,3.43e-11,69;UBERON:0000949,1.24e-10,72;UBERON:0003081,8.44e-10,87;UBERON:0001041,2.41e-09,80|phase1_expression=0,0,0,0,0,0,0,6.32704284863724,0.281577444303333,0,0,0.0797721589953364,5.30722262786738,3.84649770643589,0,0.202475267389826,0,0.788655413395594,1.64537320326887,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.17875767294343,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.683483523191411,0,0,0.565105371014073,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.405450430580328,0.616265742988964,2.5984164595559,1.25318686967237,3.77494574084403,5.04820887983869,4.28299628806274,4.13962444787405,5.56309688581499,5.34378781225255,3.50848370663109,5.00301576529713,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p2@Pde11a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241489 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6SXR7 | |||
|association_with_transcript=0bp_to_ENSMUST00000144892_5end | |||
|cluster_id=chr2:76053420..76053462,- | |||
|description=CAGE_peak_2_at_Pde11a_5end | |||
|id=chr2:76053420..76053462,- | |||
|ontology_enrichment_celltype=CL:0000791!9.68e-08!9;CL:0000789!9.68e-08!9;CL:0002420!9.68e-08!9;CL:0002419!9.68e-08!9;CL:0000790!9.68e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.84e-13,9;CL:0000789,2.84e-13,9;CL:0002420,2.84e-13,9;CL:0002419,2.84e-13,9;CL:0000790,2.84e-13,9;CL:0000084,7.84e-11,11;CL:0000827,7.84e-11,11;CL:0000624,5.18e-10,8;CL:0000838,6.48e-10,12;CL:0000542,3.87e-09,13;CL:0000051,3.87e-09,13;CL:0000738,6.12e-07,17;CL:0002087,6.12e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.98e-19!29;UBERON:0002370!1.28e-18!23;UBERON:0000974!1.28e-18!23;UBERON:0004807!1.28e-18!23;UBERON:0005058!1.28e-18!23;UBERON:0003351!1.28e-18!23;UBERON:0009113!1.28e-18!23;UBERON:0003295!1.28e-18!23;UBERON:0009722!1.28e-18!23;UBERON:0005562!1.28e-18!23;UBERON:0007690!1.28e-18!23;UBERON:0006562!1.34e-17!24;UBERON:0003408!1.34e-17!24;UBERON:0001557!1.34e-17!24;UBERON:0001042!1.34e-17!24;UBERON:0008814!1.34e-17!24;UBERON:0009145!1.34e-17!24;UBERON:0002193!2.07e-15!48;UBERON:0002390!2.72e-15!45;UBERON:0003061!2.72e-15!45;UBERON:0000072!5.25e-15!27;UBERON:0000063!5.91e-13!35;UBERON:0000065!1.26e-12!41;UBERON:0001004!3.61e-12!42;UBERON:0005057!4.23e-09!51;UBERON:0002405!5.24e-09!70;UBERON:0003081!1.15e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.93e-38,23;UBERON:0000974,7.93e-38,23;UBERON:0004807,7.93e-38,23;UBERON:0005058,7.93e-38,23;UBERON:0003351,7.93e-38,23;UBERON:0009113,7.93e-38,23;UBERON:0003295,7.93e-38,23;UBERON:0009722,7.93e-38,23;UBERON:0005562,7.93e-38,23;UBERON:0007690,7.93e-38,23;UBERON:0006562,3.62e-36,24;UBERON:0003408,3.62e-36,24;UBERON:0001557,3.62e-36,24;UBERON:0001042,3.62e-36,24;UBERON:0008814,3.62e-36,24;UBERON:0009145,3.62e-36,24;UBERON:0000072,6.31e-32,27;UBERON:0004177,1.39e-29,29;UBERON:0005057,1.39e-29,29;UBERON:0000077,3.68e-24,35;UBERON:0007811,1.97e-23,36;UBERON:0002193,1.16e-22,48;UBERON:0002405,1.16e-22,48;UBERON:0002390,4.14e-21,45;UBERON:0003061,4.14e-21,45;UBERON:0000065,2.56e-20,41;UBERON:0001004,8.76e-20,42;UBERON:0000153,2.83e-19,43;UBERON:0003929,1.34e-14,55;UBERON:0002368,3.35e-13,60;UBERON:0002530,5.13e-12,65;UBERON:0000490,8.43e-12,66;UBERON:0005911,3.43e-11,69;UBERON:0000949,1.24e-10,72;UBERON:0003081,8.44e-10,87;UBERON:0001041,2.41e-09,80 | |||
|phase1_expression=0,0,0,0,0,0,0,6.32704284863724,0.281577444303333,0,0,0.0797721589953364,5.30722262786738,3.84649770643589,0,0.202475267389826,0,0.788655413395594,1.64537320326887,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.17875767294343,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.683483523191411,0,0,0.565105371014073,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.405450430580328,0.616265742988964,2.5984164595559,1.25318686967237,3.77494574084403,5.04820887983869,4.28299628806274,4.13962444787405,5.56309688581499,5.34378781225255,3.50848370663109,5.00301576529713,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p2@Pde11a | |||
}} |
Revision as of 11:47, 5 August 2015
Short description: | p2@Pde11a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde11a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000144892_5end |
EntrezGene: | 241489 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.84e-13 | 9 |
alpha-beta T cell | 2.84e-13 | 9 |
immature T cell | 2.84e-13 | 9 |
mature T cell | 2.84e-13 | 9 |
immature alpha-beta T cell | 2.84e-13 | 9 |
T cell | 7.84e-11 | 11 |
pro-T cell | 7.84e-11 | 11 |
CD4-positive, alpha-beta T cell | 5.18e-10 | 8 |
lymphoid lineage restricted progenitor cell | 6.48e-10 | 12 |
lymphocyte | 3.87e-09 | 13 |
common lymphoid progenitor | 3.87e-09 | 13 |
leukocyte | 6.12e-07 | 17 |
nongranular leukocyte | 6.12e-07 | 17 |