FFCP PHASE1:Mm9::chr8:108576909..108576928,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr8:108576909..108576928,+ to FFCP PHASE1:Mm9::chr8:108576909..108576928,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:108576909..108576928,+ | |||
|description=CAGE_peak_at_chr8:108576909..108576928,+ | |||
|id=chr8:108576909..108576928,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.67e-11!25;CL:0000791!1.65e-09!9;CL:0000789!1.65e-09!9;CL:0002420!1.65e-09!9;CL:0002419!1.65e-09!9;CL:0000790!1.65e-09!9;CL:0000838!5.31e-09!12;CL:0000988!3.30e-08!32;CL:0002032!3.30e-08!32;CL:0000037!3.30e-08!32;CL:0000566!3.30e-08!32;CL:0000837!3.30e-08!32;CL:0000542!3.51e-08!13;CL:0000051!3.51e-08!13;CL:0000624!7.99e-08!8;CL:0000084!1.52e-07!11;CL:0000827!1.52e-07!11;CL:0000553!1.66e-07!6;CL:0000556!1.66e-07!6;CL:0000738!1.96e-07!17;CL:0002087!1.96e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.08e-11,25;CL:0000838,7.70e-10,12;CL:0000542,4.54e-09,13;CL:0000051,4.54e-09,13;CL:0000791,1.09e-08,9;CL:0000789,1.09e-08,9;CL:0002420,1.09e-08,9;CL:0002419,1.09e-08,9;CL:0000790,1.09e-08,9;CL:0000988,2.16e-08,32;CL:0002032,2.16e-08,32;CL:0000037,2.16e-08,32;CL:0000837,2.16e-08,32;CL:0000553,2.38e-07,6;CL:0000556,2.38e-07,6;CL:0000084,3.94e-07,11;CL:0000827,3.94e-07,11;CL:0000738,6.89e-07,17;CL:0002087,6.89e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.09e-20!23;UBERON:0000974!4.09e-20!23;UBERON:0004807!4.09e-20!23;UBERON:0005058!4.09e-20!23;UBERON:0003351!4.09e-20!23;UBERON:0009113!4.09e-20!23;UBERON:0003295!4.09e-20!23;UBERON:0009722!4.09e-20!23;UBERON:0005562!4.09e-20!23;UBERON:0007690!4.09e-20!23;UBERON:0002390!1.39e-19!45;UBERON:0003061!1.39e-19!45;UBERON:0002193!1.42e-19!48;UBERON:0006562!4.49e-19!24;UBERON:0003408!4.49e-19!24;UBERON:0001557!4.49e-19!24;UBERON:0001042!4.49e-19!24;UBERON:0008814!4.49e-19!24;UBERON:0009145!4.49e-19!24;UBERON:0004177!1.19e-18!29;UBERON:0000072!2.04e-16!27;UBERON:0002405!1.20e-14!70;UBERON:0003929!3.85e-13!55;UBERON:0000063!5.86e-13!35;UBERON:0005057!8.16e-12!51;UBERON:0000065!1.29e-11!41;UBERON:0001004!3.23e-11!42;UBERON:0005911!4.47e-11!69;UBERON:0000490!6.85e-10!66;UBERON:0003081!7.63e-10!88;UBERON:0002368!2.23e-07!60;UBERON:0004921!3.94e-07!126;UBERON:0004185!3.94e-07!126;UBERON:0001007!6.76e-07!128;UBERON:0001555!6.76e-07!128;UBERON:0007026!6.76e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.38e-23,23;UBERON:0000974,3.38e-23,23;UBERON:0004807,3.38e-23,23;UBERON:0005058,3.38e-23,23;UBERON:0003351,3.38e-23,23;UBERON:0009113,3.38e-23,23;UBERON:0003295,3.38e-23,23;UBERON:0009722,3.38e-23,23;UBERON:0005562,3.38e-23,23;UBERON:0007690,3.38e-23,23;UBERON:0006562,3.64e-22,24;UBERON:0003408,3.64e-22,24;UBERON:0001557,3.64e-22,24;UBERON:0001042,3.64e-22,24;UBERON:0008814,3.64e-22,24;UBERON:0009145,3.64e-22,24;UBERON:0000072,1.59e-19,27;UBERON:0002390,2.98e-18,45;UBERON:0003061,2.98e-18,45;UBERON:0004177,4.58e-18,29;UBERON:0005057,4.58e-18,29;UBERON:0002193,5.61e-17,48;UBERON:0002405,5.61e-17,48;UBERON:0000077,1.09e-14,35;UBERON:0007811,3.11e-14,36;UBERON:0000065,2.70e-12,41;UBERON:0001004,5.81e-12,42;UBERON:0000153,1.21e-11,43;UBERON:0003929,9.80e-09,55;UBERON:0003081,2.24e-08,87;UBERON:0002368,7.27e-08,60;UBERON:0002530,3.97e-07,65;UBERON:0000490,5.40e-07,66 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,2.1950964985068,0.281577444303333,0.234064526321993,0,0,1.02720437958723,0.611942816932982,0.333109761815663,0.202475267389826,0,1.73504190947031,1.64537320326887,1.27316895539409,0,0,0,0,0,1.14846392823004,0,0,0.760093677825496,0,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,3.62681071005672,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.389762468933385,1.25318686967237,4.76835251475036,4.20684073319891,5.02144392393563,3.23092639834072,2.057583779685,3.52891647978942,1.16949456887703,2.40529604100824,2.10378423926824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,2.1950964985068,0.281577444303333,0.234064526321993,0,0,1.02720437958723,0.611942816932982,0.333109761815663,0.202475267389826,0,1.73504190947031,1.64537320326887,1.27316895539409,0,0,0,0,0,1.14846392823004,0,0,0.760093677825496,0,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,3.62681071005672,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.389762468933385,1.25318686967237,4.76835251475036,4.20684073319891,5.02144392393563,3.23092639834072,2.057583779685,3.52891647978942,1.16949456887703,2.40529604100824,2.10378423926824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr8:108576909..108576928,+ | |||
}} | }} |
Latest revision as of 20:33, 5 August 2015
Short description: | p@chr8:108576909..108576928, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:108576909..108576928, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.08e-11 | 25 |
lymphoid lineage restricted progenitor cell | 7.70e-10 | 12 |
lymphocyte | 4.54e-09 | 13 |
common lymphoid progenitor | 4.54e-09 | 13 |
mature alpha-beta T cell | 1.09e-08 | 9 |
alpha-beta T cell | 1.09e-08 | 9 |
immature T cell | 1.09e-08 | 9 |
mature T cell | 1.09e-08 | 9 |
immature alpha-beta T cell | 1.09e-08 | 9 |
hematopoietic cell | 2.16e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.16e-08 | 32 |
hematopoietic stem cell | 2.16e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.16e-08 | 32 |
megakaryocyte progenitor cell | 2.38e-07 | 6 |
megakaryocyte | 2.38e-07 | 6 |
T cell | 3.94e-07 | 11 |
pro-T cell | 3.94e-07 | 11 |
leukocyte | 6.89e-07 | 17 |
nongranular leukocyte | 6.89e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.38e-23 | 23 |
neck | 3.38e-23 | 23 |
respiratory system epithelium | 3.38e-23 | 23 |
hemolymphoid system gland | 3.38e-23 | 23 |
pharyngeal epithelium | 3.38e-23 | 23 |
thymic region | 3.38e-23 | 23 |
pharyngeal gland | 3.38e-23 | 23 |
entire pharyngeal arch endoderm | 3.38e-23 | 23 |
thymus primordium | 3.38e-23 | 23 |
early pharyngeal endoderm | 3.38e-23 | 23 |
pharynx | 3.64e-22 | 24 |
gland of gut | 3.64e-22 | 24 |
upper respiratory tract | 3.64e-22 | 24 |
chordate pharynx | 3.64e-22 | 24 |
pharyngeal arch system | 3.64e-22 | 24 |
pharyngeal region of foregut | 3.64e-22 | 24 |
segment of respiratory tract | 1.59e-19 | 27 |
hematopoietic system | 2.98e-18 | 45 |
blood island | 2.98e-18 | 45 |
hemopoietic organ | 4.58e-18 | 29 |
immune organ | 4.58e-18 | 29 |
hemolymphoid system | 5.61e-17 | 48 |
immune system | 5.61e-17 | 48 |
mixed endoderm/mesoderm-derived structure | 1.09e-14 | 35 |
craniocervical region | 3.11e-14 | 36 |
respiratory tract | 2.70e-12 | 41 |
respiratory system | 5.81e-12 | 42 |
anterior region of body | 1.21e-11 | 43 |
gut epithelium | 9.80e-09 | 55 |
lateral plate mesoderm | 2.24e-08 | 87 |
endocrine gland | 7.27e-08 | 60 |
gland | 3.97e-07 | 65 |
unilaminar epithelium | 5.40e-07 | 66 |