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FFCP PHASE1:Mm9::chr1:75233102..75233123,+: Difference between revisions

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{{FFCP|EntrezGene=56812|HGNC=|MCL_coexpression_id=0|UniProt=Q9QYI5,Q3TB24|association_with_transcript=62bp_to_ENSMUST00000055223,ENSMUST00000082158,ENSMUST00000116582,ENSMUST00000169680_5end|description=CAGE_peak_8_at_Dnajb2_5end|id=chr1:75233102..75233123,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.47e-10!102;UBERON:0000924!9.47e-10!102;UBERON:0006601!9.47e-10!102;UBERON:0000073!1.07e-09!75;UBERON:0001016!1.07e-09!75;UBERON:0004111!1.24e-09!122;UBERON:0001017!4.52e-09!73;UBERON:0005743!4.52e-09!73;UBERON:0000025!1.11e-08!114;UBERON:0001049!7.88e-08!52;UBERON:0005068!7.88e-08!52;UBERON:0006241!7.88e-08!52;UBERON:0007135!7.88e-08!52;UBERON:0000955!1.40e-07!50;UBERON:0006238!1.40e-07!50;UBERON:0000033!1.56e-07!63;UBERON:0002616!2.93e-07!49;UBERON:0002346!5.44e-07!71;UBERON:0003075!5.44e-07!71;UBERON:0007284!5.44e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.93e-13,54;UBERON:0001016,7.69e-13,75;UBERON:0001017,2.35e-12,73;UBERON:0001049,2.54e-11,52;UBERON:0005068,2.54e-11,52;UBERON:0006241,2.54e-11,52;UBERON:0007135,2.54e-11,52;UBERON:0004121,5.34e-10,95;UBERON:0000924,5.34e-10,95;UBERON:0006601,5.34e-10,95;UBERON:0002346,8.55e-10,64;UBERON:0003075,8.55e-10,64;UBERON:0007284,8.55e-10,64;UBERON:0002616,1.33e-09,46;UBERON:0000955,2.73e-09,47;UBERON:0006238,2.73e-09,47;UBERON:0010371,8.13e-08,73;UBERON:0002950,1.12e-07,4;UBERON:0001891,1.12e-07,4;UBERON:0009616,1.12e-07,4;UBERON:0010286,1.12e-07,4;UBERON:0002021,6.31e-07,10;UBERON:0000411,6.31e-07,10;UBERON:0001950,6.31e-07,10;UBERON:0003080,9.98e-07,40|phase1_expression=0.480446541314382,0,0.454999239389536,0.90739263392049,0,0.33575854382378,0,0,0.140788722151667,0.234064526321993,0,0.159544317990673,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0,15.1377056468904,0,0,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,1.52617609466313,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0.671130424230945,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.49800055259202,1.53687322128622,0.311068836925433,0.135005938331691,0.210324961351382,1.42825492201902,0.662605622854841,0,0.0958454710182364,0,4.40463523997555,2.55374676170375,4.45458946443106,0.263772575460388,0.548925861614458,0,4.74611098302348,2.25105044012672,3.81995619442025,1.47314292736834,0.711858403995515,0.559198337475902,1.21161909333094,0.604572480854284,0,0,0.679971333707751,3.2382191498269,1.94932925234301,1.34408066129201,2.10666630197628,0.340860645156116,0.519572009205738,1.06001872353102,0.281686839553361,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,2.05530983494308,0.517875767294343,0.890652834388949,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,1.3481157546434,0,0,1.04294592115366,1.27857728665165,2.28566849015516,1.94689515681309,0.203678727700633,0.497627882440372,0.252722758433675,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.655912071918102,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0.804820204198858,0.583826711835847,0.987359099480883,0.656669856316381,0.56748166682099,0.877199924551994,0.878200461164203,1.47627060636409,1.26173969138476,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0,1.77871576252289,0.166845105716094,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.221464689648775,0,0.327726629431476,1.20879487306127,0.867894351489069,0,0.54390568381871,0.491764273019036,0.275936746304732,2.72936002979246,3.28192722458169,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0,0.214337035031592,0.177340233642274,0.713475270408282,0.164549020602121,0.304464949114599,0,0.63549621259146,1.10264199027481,0.98931751764888,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,2.78137953015765,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.539457385539283,0.330613822901344,1.30877970992015,0.259229946583586,0,104.283193656575,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.5208175393758,0,21.9841549951666,42.3404109199062,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.179427713218951,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,0.428736758158132,0.501572104035363,1.12950368523413,0.920650473014354,1.14579102687879,1.54667864109319,3.42541259885321,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,0.51776031175182,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p8@Dnajb2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56812
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:Q9QYI5,uniprot:Q3TB24
|association_with_transcript=62bp_to_ENSMUST00000055223,ENSMUST00000082158,ENSMUST00000116582,ENSMUST00000169680_5end
|cluster_id=chr1:75233102..75233123,+
|description=CAGE_peak_8_at_Dnajb2_5end
|id=chr1:75233102..75233123,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.47e-10!102;UBERON:0000924!9.47e-10!102;UBERON:0006601!9.47e-10!102;UBERON:0000073!1.07e-09!75;UBERON:0001016!1.07e-09!75;UBERON:0004111!1.24e-09!122;UBERON:0001017!4.52e-09!73;UBERON:0005743!4.52e-09!73;UBERON:0000025!1.11e-08!114;UBERON:0001049!7.88e-08!52;UBERON:0005068!7.88e-08!52;UBERON:0006241!7.88e-08!52;UBERON:0007135!7.88e-08!52;UBERON:0000955!1.40e-07!50;UBERON:0006238!1.40e-07!50;UBERON:0000033!1.56e-07!63;UBERON:0002616!2.93e-07!49;UBERON:0002346!5.44e-07!71;UBERON:0003075!5.44e-07!71;UBERON:0007284!5.44e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.93e-13,54;UBERON:0001016,7.69e-13,75;UBERON:0001017,2.35e-12,73;UBERON:0001049,2.54e-11,52;UBERON:0005068,2.54e-11,52;UBERON:0006241,2.54e-11,52;UBERON:0007135,2.54e-11,52;UBERON:0004121,5.34e-10,95;UBERON:0000924,5.34e-10,95;UBERON:0006601,5.34e-10,95;UBERON:0002346,8.55e-10,64;UBERON:0003075,8.55e-10,64;UBERON:0007284,8.55e-10,64;UBERON:0002616,1.33e-09,46;UBERON:0000955,2.73e-09,47;UBERON:0006238,2.73e-09,47;UBERON:0010371,8.13e-08,73;UBERON:0002950,1.12e-07,4;UBERON:0001891,1.12e-07,4;UBERON:0009616,1.12e-07,4;UBERON:0010286,1.12e-07,4;UBERON:0002021,6.31e-07,10;UBERON:0000411,6.31e-07,10;UBERON:0001950,6.31e-07,10;UBERON:0003080,9.98e-07,40
|phase1_expression=0.480446541314382,0,0.454999239389536,0.90739263392049,0,0.33575854382378,0,0,0.140788722151667,0.234064526321993,0,0.159544317990673,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0,15.1377056468904,0,0,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,1.52617609466313,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0.671130424230945,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.49800055259202,1.53687322128622,0.311068836925433,0.135005938331691,0.210324961351382,1.42825492201902,0.662605622854841,0,0.0958454710182364,0,4.40463523997555,2.55374676170375,4.45458946443106,0.263772575460388,0.548925861614458,0,4.74611098302348,2.25105044012672,3.81995619442025,1.47314292736834,0.711858403995515,0.559198337475902,1.21161909333094,0.604572480854284,0,0,0.679971333707751,3.2382191498269,1.94932925234301,1.34408066129201,2.10666630197628,0.340860645156116,0.519572009205738,1.06001872353102,0.281686839553361,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,2.05530983494308,0.517875767294343,0.890652834388949,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,1.3481157546434,0,0,1.04294592115366,1.27857728665165,2.28566849015516,1.94689515681309,0.203678727700633,0.497627882440372,0.252722758433675,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.655912071918102,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0.804820204198858,0.583826711835847,0.987359099480883,0.656669856316381,0.56748166682099,0.877199924551994,0.878200461164203,1.47627060636409,1.26173969138476,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0,1.77871576252289,0.166845105716094,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.221464689648775,0,0.327726629431476,1.20879487306127,0.867894351489069,0,0.54390568381871,0.491764273019036,0.275936746304732,2.72936002979246,3.28192722458169,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0,0.214337035031592,0.177340233642274,0.713475270408282,0.164549020602121,0.304464949114599,0,0.63549621259146,1.10264199027481,0.98931751764888,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,2.78137953015765,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.539457385539283,0.330613822901344,1.30877970992015,0.259229946583586,0,104.283193656575,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.5208175393758,0,21.9841549951666,42.3404109199062,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.179427713218951,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,0.428736758158132,0.501572104035363,1.12950368523413,0.920650473014354,1.14579102687879,1.54667864109319,3.42541259885321,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,0.51776031175182,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p8@Dnajb2
}}

Revision as of 00:47, 6 August 2015

Short description:p8@Dnajb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Dnajb2_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 62bp_to_ENSMUST00000055223, ENSMUST00000082158, ENSMUST00000116582, ENSMUST00000169680_5end
EntrezGene:56812
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Dnajb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5104.28
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H321.98
testis, neonate N30.CNhs11130.1391-42E242.34
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.93e-1354
nervous system7.69e-1375
central nervous system2.35e-1273
neural tube2.54e-1152
neural rod2.54e-1152
future spinal cord2.54e-1152
neural keel2.54e-1152
ectoderm-derived structure5.34e-1095
ectoderm5.34e-1095
presumptive ectoderm5.34e-1095
neurectoderm8.55e-1064
neural plate8.55e-1064
presumptive neural plate8.55e-1064
regional part of brain1.33e-0946
brain2.73e-0947
future brain2.73e-0947
ecto-epithelium8.13e-0873
regional part of midbrain1.12e-074
midbrain1.12e-074
presumptive midbrain1.12e-074
midbrain neural tube1.12e-074
occipital lobe6.31e-0710
visual cortex6.31e-0710
neocortex6.31e-0710
anterior neural tube9.98e-0740
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