FFCP PHASE1:Mm9::chr18:84890165..84890175,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |MCL_coexpression_id=133 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000162318_5end | |association_with_transcript=0bp_to_ENSMUST00000162318_5end | ||
|cluster_id=chr18:84890165..84890175,- | |||
|description=CAGE_peak_1_at_ENSMUST00000162318_5end | |description=CAGE_peak_1_at_ENSMUST00000162318_5end | ||
|id=chr18:84890165..84890175,- | |id=chr18:84890165..84890175,- | ||
|ontology_enrichment_celltype=CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000540!7.54e-07!33;CL:0000047!7.54e-07!33;CL:0000031!7.54e-07!33;CL:0000404!7.54e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000540!7.54e-07!33;CL:0000047!7.54e-07!33;CL:0000031!7.54e-07!33;CL:0000404!7.54e-07!33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.05e-20!63;UBERON:0003056!1.67e-19!49;UBERON:0002346!1.76e-19!71;UBERON:0003075!1.76e-19!71;UBERON:0007284!1.76e-19!71;UBERON:0004121!5.40e-18!102;UBERON:0000924!5.40e-18!102;UBERON:0006601!5.40e-18!102;UBERON:0001049!2.03e-17!52;UBERON:0005068!2.03e-17!52;UBERON:0006241!2.03e-17!52;UBERON:0007135!2.03e-17!52;UBERON:0001017!3.94e-15!73;UBERON:0005743!3.94e-15!73;UBERON:0000073!2.14e-14!75;UBERON:0001016!2.14e-14!75;UBERON:0002616!1.17e-13!49;UBERON:0000955!3.38e-13!50;UBERON:0006238!3.38e-13!50;UBERON:0000153!1.11e-12!94;UBERON:0003080!2.05e-12!40;UBERON:0002780!8.78e-12!39;UBERON:0001890!8.78e-12!39;UBERON:0006240!8.78e-12!39;UBERON:0007811!9.28e-12!86;UBERON:0002020!6.54e-10!34;UBERON:0000020!1.17e-09!12;UBERON:0001032!1.17e-09!12;UBERON:0004456!1.17e-09!12;UBERON:0000970!4.24e-09!9;UBERON:0000019!4.24e-09!9;UBERON:0000047!4.24e-09!9;UBERON:0004088!4.24e-09!9;UBERON:0002104!4.24e-09!9;UBERON:0001456!4.24e-09!9;UBERON:0003072!4.24e-09!9;UBERON:0003071!4.24e-09!9;UBERON:0004128!4.24e-09!9;UBERON:0005085!1.11e-08!13;UBERON:0001894!2.08e-07!10;UBERON:0006222!2.08e-07!10;UBERON:0001444!4.90e-07!11;UBERON:0002240!9.80e-07!6;UBERON:0005174!9.80e-07!6;UBERON:0001137!9.80e-07!6 | |ontology_enrichment_uberon=UBERON:0000033!1.05e-20!63;UBERON:0003056!1.67e-19!49;UBERON:0002346!1.76e-19!71;UBERON:0003075!1.76e-19!71;UBERON:0007284!1.76e-19!71;UBERON:0004121!5.40e-18!102;UBERON:0000924!5.40e-18!102;UBERON:0006601!5.40e-18!102;UBERON:0001049!2.03e-17!52;UBERON:0005068!2.03e-17!52;UBERON:0006241!2.03e-17!52;UBERON:0007135!2.03e-17!52;UBERON:0001017!3.94e-15!73;UBERON:0005743!3.94e-15!73;UBERON:0000073!2.14e-14!75;UBERON:0001016!2.14e-14!75;UBERON:0002616!1.17e-13!49;UBERON:0000955!3.38e-13!50;UBERON:0006238!3.38e-13!50;UBERON:0000153!1.11e-12!94;UBERON:0003080!2.05e-12!40;UBERON:0002780!8.78e-12!39;UBERON:0001890!8.78e-12!39;UBERON:0006240!8.78e-12!39;UBERON:0007811!9.28e-12!86;UBERON:0002020!6.54e-10!34;UBERON:0000020!1.17e-09!12;UBERON:0001032!1.17e-09!12;UBERON:0004456!1.17e-09!12;UBERON:0000970!4.24e-09!9;UBERON:0000019!4.24e-09!9;UBERON:0000047!4.24e-09!9;UBERON:0004088!4.24e-09!9;UBERON:0002104!4.24e-09!9;UBERON:0001456!4.24e-09!9;UBERON:0003072!4.24e-09!9;UBERON:0003071!4.24e-09!9;UBERON:0004128!4.24e-09!9;UBERON:0005085!1.11e-08!13;UBERON:0001894!2.08e-07!10;UBERON:0006222!2.08e-07!10;UBERON:0001444!4.90e-07!11;UBERON:0002240!9.80e-07!6;UBERON:0005174!9.80e-07!6;UBERON:0001137!9.80e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.32e-26,9;UBERON:0000019,5.32e-26,9;UBERON:0000047,5.32e-26,9;UBERON:0010312,5.32e-26,9;UBERON:0004088,5.32e-26,9;UBERON:0002104,5.32e-26,9;UBERON:0001456,5.32e-26,9;UBERON:0003072,5.32e-26,9;UBERON:0004128,5.32e-26,9;UBERON:0003071,5.32e-26,9;UBERON:0001444,3.09e-21,11;UBERON:0000020,1.90e-19,12;UBERON:0001032,1.90e-19,12;UBERON:0004456,1.90e-19,12;UBERON:0000033,6.23e-18,13;UBERON:0005085,6.23e-18,13;UBERON:0003056,6.08e-12,49;UBERON:0002346,8.27e-11,64;UBERON:0003075,8.27e-11,64;UBERON:0007284,8.27e-11,64;UBERON:0004121,6.75e-10,95;UBERON:0000924,6.75e-10,95;UBERON:0006601,6.75e-10,95;UBERON:0010371,2.57e-09,73;UBERON:0010314,4.09e-07,92 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,0,1.05162480675691,0.285650984403804,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.914876436024097,0,0,1.12552522006336,0.30559649555362,0.589257170947335,0.427115042397309,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.869121600961382,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0.650602214813519,4.59804208866946,7.38254732201932,5.27466862425003,7.21186891004075,5.76511741281824,5.05989312622536,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,1.03486947026204,0.428674070063185,0.532020700926821,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,1.19707462020309,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.384150914429216,0.114870937911227,0,0,0,0,0,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,0,1.05162480675691,0.285650984403804,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.914876436024097,0,0,1.12552522006336,0.30559649555362,0.589257170947335,0.427115042397309,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.869121600961382,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0.650602214813519,4.59804208866946,7.38254732201932,5.27466862425003,7.21186891004075,5.76511741281824,5.05989312622536,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,1.03486947026204,0.428674070063185,0.532020700926821,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,1.19707462020309,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.384150914429216,0.114870937911227,0,0,0,0,0,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p1@ENSMUST00000162318 | |short_description=p1@ENSMUST00000162318 | ||
}} | }} |
Latest revision as of 05:15, 6 August 2015
Short description: | p1@ENSMUST00000162318 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000162318_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 0bp_to_ENSMUST00000162318_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.32e-26 | 9 |
camera-type eye | 5.32e-26 | 9 |
simple eye | 5.32e-26 | 9 |
immature eye | 5.32e-26 | 9 |
ocular region | 5.32e-26 | 9 |
visual system | 5.32e-26 | 9 |
face | 5.32e-26 | 9 |
optic cup | 5.32e-26 | 9 |
optic vesicle | 5.32e-26 | 9 |
eye primordium | 5.32e-26 | 9 |
subdivision of head | 3.09e-21 | 11 |
sense organ | 1.90e-19 | 12 |
sensory system | 1.90e-19 | 12 |
entire sense organ system | 1.90e-19 | 12 |
head | 6.23e-18 | 13 |
ectodermal placode | 6.23e-18 | 13 |
pre-chordal neural plate | 6.08e-12 | 49 |
neurectoderm | 8.27e-11 | 64 |
neural plate | 8.27e-11 | 64 |
presumptive neural plate | 8.27e-11 | 64 |
ectoderm-derived structure | 6.75e-10 | 95 |
ectoderm | 6.75e-10 | 95 |
presumptive ectoderm | 6.75e-10 | 95 |
ecto-epithelium | 2.57e-09 | 73 |
structure with developmental contribution from neural crest | 4.09e-07 | 92 |