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FFCP PHASE1:Mm9::chr5:123439357..123439375,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:123439357..123439375,+
|DHSsupport=NA
|short_description=p1@ENSMUST00000148466,p1@uc008zmw.1
|DPIdataset=NA
|description=CAGE_peak_1_at_ENSMUST00000148466_5end,CAGE_peak_1_at_uc008zmw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000148466,uc008zmw.1_5end
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=170
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000148466,uc008zmw.1_5end
|cluster_id=chr5:123439357..123439375,+
|description=CAGE_peak_1_at_ENSMUST00000148466_5end,CAGE_peak_1_at_uc008zmw.1_5end
|id=chr5:123439357..123439375,+
|ontology_enrichment_celltype=CL:0000838!2.16e-09!12;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000542!4.11e-08!13;CL:0000051!4.11e-08!13;CL:0000791!4.30e-08!9;CL:0000789!4.30e-08!9;CL:0002420!4.30e-08!9;CL:0002419!4.30e-08!9;CL:0000790!4.30e-08!9;CL:0000624!2.45e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.88e-45,9;CL:0000789,2.88e-45,9;CL:0002420,2.88e-45,9;CL:0002419,2.88e-45,9;CL:0000790,2.88e-45,9;CL:0000838,1.82e-41,12;CL:0000624,3.38e-40,8;CL:0000542,3.52e-38,13;CL:0000051,3.52e-38,13;CL:0000084,7.56e-37,11;CL:0000827,7.56e-37,11;CL:0000893,2.49e-30,6;CL:0002489,2.49e-30,6;CL:0000898,2.49e-30,6;CL:0000809,2.49e-30,6;CL:0000810,2.49e-30,6;CL:0000895,2.49e-30,6;CL:0000808,2.49e-30,6;CL:0000894,2.49e-30,6;CL:0000806,2.49e-30,6;CL:0000807,2.49e-30,6;CL:0000805,2.49e-30,6;CL:0002425,2.49e-30,6;CL:0002436,2.49e-30,6;CL:0002427,2.49e-30,6;CL:0002428,2.49e-30,6;CL:0002429,2.49e-30,6;CL:0002433,2.49e-30,6;CL:0002431,2.49e-30,6;CL:0002432,2.49e-30,6;CL:0000738,6.81e-29,17;CL:0002087,6.81e-29,17;CL:0002031,3.24e-19,25;CL:0000988,1.05e-14,32;CL:0002032,1.05e-14,32;CL:0000037,1.05e-14,32;CL:0000837,1.05e-14,32;CL:0002320,8.65e-10,46;CL:0000134,8.65e-10,46;CL:0000219,4.04e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!6.11e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.33e-10,23;UBERON:0000974,4.33e-10,23;UBERON:0004807,4.33e-10,23;UBERON:0005058,4.33e-10,23;UBERON:0003351,4.33e-10,23;UBERON:0009113,4.33e-10,23;UBERON:0003295,4.33e-10,23;UBERON:0009722,4.33e-10,23;UBERON:0005562,4.33e-10,23;UBERON:0007690,4.33e-10,23;UBERON:0002384,8.65e-10,46;UBERON:0006562,1.22e-09,24;UBERON:0003408,1.22e-09,24;UBERON:0001557,1.22e-09,24;UBERON:0001042,1.22e-09,24;UBERON:0008814,1.22e-09,24;UBERON:0009145,1.22e-09,24;UBERON:0000072,1.74e-08,27;UBERON:0004177,7.53e-08,29;UBERON:0005057,7.53e-08,29
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,3.74457637980571,6.05391505252167,4.44722600011788,4.79410311031414,2.39316476986009,6.33442700745461,3.67165690159789,0.333109761815663,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,0,3.18786951509699,15.2326049822382,13.4437519656986,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.841299845405528,0,0.441737081903227,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.916789486660861,0,0.142371680799103,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0,0,0.913396434936424,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0.441683036920787,0.484875253135222,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0.241584120826006,0.576060012515731,0.632022241256357,0.405450430580328,0.205421914329655,0.51968329191118,0,0.198681354781265,0.480781798079875,1.03382669022204,0.403865799792591,0.533447646584999,0.403304740547362,0.584747284438515,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,3.74457637980571,6.05391505252167,4.44722600011788,4.79410311031414,2.39316476986009,6.33442700745461,3.67165690159789,0.333109761815663,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,0,3.18786951509699,15.2326049822382,13.4437519656986,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.841299845405528,0,0.441737081903227,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.916789486660861,0,0.142371680799103,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0,0,0.913396434936424,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0.441683036920787,0.484875253135222,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0.241584120826006,0.576060012515731,0.632022241256357,0.405450430580328,0.205421914329655,0.51968329191118,0,0.198681354781265,0.480781798079875,1.03382669022204,0.403865799792591,0.533447646584999,0.403304740547362,0.584747284438515,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p1@ENSMUST00000148466,p1@uc008zmw.1
}}
}}

Latest revision as of 06:17, 6 August 2015

Short description:p1@ENSMUST00000148466, p1@uc008zmw.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_ENSMUST00000148466_5end, CAGE_peak_1_at_uc008zmw.1_5end
Coexpression cluster:MCL_coexpression_mm9:170
Association with transcript: 0bp_to_ENSMUST00000148466, uc008zmw.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@ENSMUST00000148466p1@uc008zmw.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.88e-459
alpha-beta T cell2.88e-459
immature T cell2.88e-459
mature T cell2.88e-459
immature alpha-beta T cell2.88e-459
lymphoid lineage restricted progenitor cell1.82e-4112
CD4-positive, alpha-beta T cell3.38e-408
lymphocyte3.52e-3813
common lymphoid progenitor3.52e-3813
T cell7.56e-3711
pro-T cell7.56e-3711
thymocyte2.49e-306
double negative thymocyte2.49e-306
naive T cell2.49e-306
double-positive, alpha-beta thymocyte2.49e-306
CD4-positive, alpha-beta thymocyte2.49e-306
naive thymus-derived CD4-positive, alpha-beta T cell2.49e-306
DN4 thymocyte2.49e-306
DN1 thymic pro-T cell2.49e-306
DN2 thymocyte2.49e-306
DN3 thymocyte2.49e-306
immature single positive thymocyte2.49e-306
early T lineage precursor2.49e-306
mature CD4 single-positive thymocyte2.49e-306
resting double-positive thymocyte2.49e-306
double-positive blast2.49e-306
CD69-positive double-positive thymocyte2.49e-306
CD69-positive, CD4-positive single-positive thymocyte2.49e-306
CD4-positive, CD8-intermediate double-positive thymocyte2.49e-306
CD24-positive, CD4 single-positive thymocyte2.49e-306
leukocyte6.81e-2917
nongranular leukocyte6.81e-2917
hematopoietic lineage restricted progenitor cell3.24e-1925
hematopoietic cell1.05e-1432
hematopoietic oligopotent progenitor cell1.05e-1432
hematopoietic stem cell1.05e-1432
hematopoietic multipotent progenitor cell1.05e-1432
connective tissue cell8.65e-1046
mesenchymal cell8.65e-1046
motile cell4.04e-0854
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