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FFCP PHASE1:Hg19::chr3:149260344..149260358,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=25937
|EntrezGene=25937
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=24042
|HGNC=24042
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-118bp_to_ENST00000485244_5end
|association_with_transcript=-118bp_to_ENST00000485244_5end
|cluster_id=chr3:149260344..149260358,-
|coexpression_cluster_id=C1922
|coexpression_cluster_id=C1922
|description=CAGE_peak_18_at_WWTR1_5end
|description=CAGE_peak_18_at_WWTR1_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002139!1.83e-27!24;CL:0000115!1.62e-19!35;CL:0002078!2.54e-18!44;CL:0000213!3.32e-17!57;CL:0000215!3.32e-17!57;CL:0000071!1.43e-16!18;CL:0002546!1.43e-16!18;CL:0005020!1.49e-13!6;CL:0002138!1.49e-13!6;CL:0005022!1.49e-13!6;CL:0000222!3.44e-11!119;CL:0000066!3.85e-11!254;CL:0002543!6.26e-10!6;CL:1000497!1.75e-09!18;CL:0002518!1.75e-09!18;CL:1000507!5.06e-09!12;CL:1000494!5.06e-09!12;CL:1000449!1.70e-08!16;CL:0002681!2.74e-08!13;CL:0002584!2.74e-08!13;CL:0002144!5.09e-08!3;CL:0002618!5.09e-08!3;CL:0000220!5.61e-07!246;CL:0002321!7.69e-07!248
|ontology_enrichment_celltype=CL:0002139!1.83e-27!24;CL:0000115!1.62e-19!35;CL:0002078!2.54e-18!44;CL:0000213!3.32e-17!57;CL:0000215!3.32e-17!57;CL:0000071!1.43e-16!18;CL:0002546!1.43e-16!18;CL:0005020!1.49e-13!6;CL:0002138!1.49e-13!6;CL:0005022!1.49e-13!6;CL:0000222!3.44e-11!119;CL:0000066!3.85e-11!254;CL:0002543!6.26e-10!6;CL:1000497!1.75e-09!18;CL:0002518!1.75e-09!18;CL:1000507!5.06e-09!12;CL:1000494!5.06e-09!12;CL:1000449!1.70e-08!16;CL:0002681!2.74e-08!13;CL:0002584!2.74e-08!13;CL:0002144!5.09e-08!3;CL:0002618!5.09e-08!3;CL:0000220!5.61e-07!246;CL:0002321!7.69e-07!248
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|ontology_enrichment_celltype_v019=CL:1000497;1.64e-20;17!CL:0002518;1.64e-20;17!CL:1000507;4.40e-18;10!CL:1000494;4.40e-18;10!CL:1000449;4.13e-17;15!CL:0002681;3.55e-15;12!CL:0002584;3.55e-15;12!CL:0000239;8.26e-11;3!CL:1000615;8.26e-11;3!CL:0002306;8.26e-11;3!CL:0000313;3.72e-09;1
|ontology_enrichment_celltype_v019_2=CL:1000497,2.16e-20,17;CL:0002518,2.16e-20,17;CL:1000507,5.78e-18,10;CL:1000494,5.78e-18,10;CL:1000449,5.36e-17,15;CL:0002681,4.26e-15,12;CL:0002584,4.26e-15,12;CL:0000239,5.98e-11,3;CL:1000615,5.98e-11,3;CL:0002306,5.98e-11,3;CL:0000313,3.58e-09,1;CL:0002078,2.87e-07,45;CL:0000066,5.00e-07,253
|ontology_enrichment_development_v019=UBERON:0003918;1.74e-07;10!UBERON:0007687;1.74e-07;10
|ontology_enrichment_development_v019=UBERON:0003918;1.74e-07;10!UBERON:0007687;1.74e-07;10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:4468;2.17e-16;2!DOID:2152;3.72e-09;1!DOID:299;2.34e-07;25
|ontology_enrichment_disease_v019=DOID:4468;2.17e-16;2!DOID:2152;3.72e-09;1!DOID:299;2.34e-07;25
|ontology_enrichment_disease_v019_2=DOID:4468,2.35e-16,2;DOID:2152,3.58e-09,1;DOID:299,2.23e-07,25
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|short_description=p18@WWTR1
|short_description=p18@WWTR1
}}
}}

Latest revision as of 21:54, 15 September 2015

Short description:p18@WWTR1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_18_at_WWTR1_5end
Coexpression cluster:C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung
Association with transcript: -118bp_to_ENST00000485244_5end
EntrezGene:WWTR1
HGNC: 24042
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data