FFCP PHASE1:Hg19::chr16:28508394..28508405,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24087 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-92bp_to_AK025123_5end | |||
|cluster_id=chr16:28508394..28508405,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_2_at_APOBR_5end | |||
|id=chr16:28508394..28508405,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.12e-63!112;CL:0000049!1.12e-63!112;CL:0000766!2.65e-62!76;CL:0000037!1.09e-53!172;CL:0000566!1.09e-53!172;CL:0000557!5.04e-52!71;CL:0002032!6.17e-52!165;CL:0000837!6.17e-52!165;CL:0000839!1.42e-50!70;CL:0000988!2.11e-49!182;CL:0002009!7.75e-49!65;CL:0002194!2.26e-48!63;CL:0000576!2.26e-48!63;CL:0000040!2.26e-48!63;CL:0000559!2.26e-48!63;CL:0000738!5.42e-48!140;CL:0002057!5.94e-43!42;CL:0000860!2.65e-39!45;CL:0002031!2.29e-37!124;CL:0002087!8.63e-37!119;CL:0000134!6.55e-15!358;CL:0002320!3.43e-14!365;CL:0000219!1.10e-11!390;CL:0000094!7.49e-11!8;CL:0000048!9.14e-09!430;CL:0000723!2.32e-08!436;CL:0002393!2.72e-08!9;CL:0002397!2.72e-08!9;CL:0000034!7.67e-08!444;CL:0000081!1.64e-07!11;CL:0000775!6.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-52;33!CL:0002057;8.36e-52;33!CL:0000473;6.87e-44;39!CL:0000234;6.87e-44;39!CL:0000576;1.61e-25;48!CL:0000766;2.16e-20;69!CL:0000763;4.23e-13;100!CL:0000775;1.17e-09;3!CL:0000738;4.05e-09;136!CL:0000094;8.09e-08;8!CL:0002087;4.68e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.87e-51,48;CL:0000234,3.87e-51,48;CL:0000860,4.27e-48,42;CL:0002057,4.27e-48,42;CL:0000766,3.70e-47,72;CL:0002194,3.77e-44,59;CL:0000576,3.77e-44,59;CL:0000040,3.77e-44,59;CL:0000559,3.77e-44,59;CL:0002009,1.39e-42,61;CL:0000839,4.50e-39,66;CL:0000557,1.97e-38,67;CL:0000763,5.83e-30,108;CL:0000049,5.83e-30,108;CL:0000738,6.42e-25,136;CL:0002087,8.25e-23,115;CL:0002031,1.24e-19,120;CL:0000037,3.12e-19,168;CL:0002032,1.57e-18,161;CL:0000837,1.57e-18,161;CL:0000988,5.32e-18,177;CL:0000775,1.15e-09,3;CL:0000094,7.82e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.09e-36;42!CL:0000049;2.28e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!2.30e-09!31;DOID:1240!1.21e-08!39;DOID:2531!5.53e-08!51;DOID:0060083!5.53e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.15e-64!102;UBERON:0003061!6.15e-64!102;UBERON:0002193!2.21e-56!112;UBERON:0002371!2.24e-44!80;UBERON:0001474!3.62e-40!86;UBERON:0002405!1.94e-32!115;UBERON:0004765!7.41e-32!101;UBERON:0001434!7.41e-32!101;UBERON:0003081!2.44e-21!216;UBERON:0000178!3.69e-16!15;UBERON:0000179!3.69e-16!15;UBERON:0000463!3.69e-16!15;UBERON:0002384!8.84e-14!375;UBERON:0002204!2.12e-13!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.80e-25;15!UBERON:0000179;6.80e-25;15!UBERON:0000463;6.80e-25;15!UBERON:0002390;2.89e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.70e-50,98;UBERON:0003061,9.70e-50,98;UBERON:0002193,1.09e-44,108;UBERON:0002371,2.03e-33,76;UBERON:0001474,1.11e-30,82;UBERON:0004765,1.37e-27,90;UBERON:0002405,1.45e-26,93;UBERON:0000178,4.50e-25,15;UBERON:0000179,4.50e-25,15;UBERON:0000463,4.50e-25,15;UBERON:0001434,2.06e-24,100;UBERON:0003081,2.37e-21,203;UBERON:0002204,7.00e-13,167;UBERON:0000926,8.40e-12,315;UBERON:0004120,8.40e-12,315;UBERON:0006603,8.40e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,1.00272223735071,0.868043482863407,0,0,0,3.34415949192999,2.26725566213286,0.727752183563449,2.32429036905685,2.46700732813095,0.619412741790207,1.7261543539329,1.5369642391746,0,1.37898272294647,0,0,2.82363509313907,2.18324920046277,1.34834090667051,3.97909060082173,0.962787081228281,1.27867425159808,0.659702600373432,0.997318288108159,1.27867425159808,5.5139755339431,2.26954089876456,0,3.76872997885115,2.08593167368081,0,2.42159801053347,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.964353520182481,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.215627574859517,0.77005821767849,0,0,0,0,0,5.99205619157746,26.9245313283622,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,3.82318603571188,7.40541343326411,0.952927101831156,1.64544909234478,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0,0,0.0711418433484141,0,0.59873811429845,0,0.846694330895531,0,0.280797178113459,0,0.313359791546046,0,0.338583555603207,0.481764225311099,0.605399121573143,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@APOBR | |||
}} |
Latest revision as of 00:05, 16 September 2015
Short description: | p2@APOBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOBR_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -92bp_to_AK025123_5end |
EntrezGene: | APOBR |
HGNC: | 24087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.87e-51 | 48 |
phagocyte | 3.87e-51 | 48 |
classical monocyte | 4.27e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-48 | 42 |
myeloid leukocyte | 3.70e-47 | 72 |
monopoietic cell | 3.77e-44 | 59 |
monocyte | 3.77e-44 | 59 |
monoblast | 3.77e-44 | 59 |
promonocyte | 3.77e-44 | 59 |
macrophage dendritic cell progenitor | 1.39e-42 | 61 |
myeloid lineage restricted progenitor cell | 4.50e-39 | 66 |
granulocyte monocyte progenitor cell | 1.97e-38 | 67 |
myeloid cell | 5.83e-30 | 108 |
common myeloid progenitor | 5.83e-30 | 108 |
leukocyte | 6.42e-25 | 136 |
nongranular leukocyte | 8.25e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
hematopoietic stem cell | 3.12e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.57e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-18 | 161 |
hematopoietic cell | 5.32e-18 | 177 |
neutrophil | 1.15e-09 | 3 |
granulocyte | 7.82e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.70e-50 | 98 |
blood island | 9.70e-50 | 98 |
hemolymphoid system | 1.09e-44 | 108 |
bone marrow | 2.03e-33 | 76 |
bone element | 1.11e-30 | 82 |
skeletal element | 1.37e-27 | 90 |
immune system | 1.45e-26 | 93 |
blood | 4.50e-25 | 15 |
haemolymphatic fluid | 4.50e-25 | 15 |
organism substance | 4.50e-25 | 15 |
skeletal system | 2.06e-24 | 100 |
lateral plate mesoderm | 2.37e-21 | 203 |
musculoskeletal system | 7.00e-13 | 167 |
mesoderm | 8.40e-12 | 315 |
mesoderm-derived structure | 8.40e-12 | 315 |
presumptive mesoderm | 8.40e-12 | 315 |