FFCP PHASE1:Hg19::chr5:148034085..148034097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3360 | |EntrezGene=3360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5299 | |HGNC=5299 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK45 | |UniProt=E5RK45 | ||
|association_with_transcript=0bp_to_ENST00000524063_5end | |association_with_transcript=0bp_to_ENST00000524063_5end | ||
|cluster_id=chr5:148034085..148034097,- | |||
|description=CAGE_peak_2_at_HTR4_5end | |description=CAGE_peak_2_at_HTR4_5end | ||
|id=chr5:148034085..148034097,- | |id=chr5:148034085..148034097,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.65e-14;1!UBERON:0005062;1.89e-13;4!UBERON:0007284;1.89e-13;4!UBERON:0003104;7.12e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-53!115;UBERON:0002780!1.53e-30!41;UBERON:0001890!1.53e-30!41;UBERON:0006240!1.53e-30!41;UBERON:0003080!1.08e-29!42;UBERON:0002020!2.59e-27!34;UBERON:0003528!2.59e-27!34;UBERON:0001049!4.59e-27!57;UBERON:0005068!4.59e-27!57;UBERON:0006241!4.59e-27!57;UBERON:0007135!4.59e-27!57;UBERON:0001869!2.64e-26!32;UBERON:0002616!6.14e-26!59;UBERON:0003075!1.42e-24!86;UBERON:0007284!1.42e-24!86;UBERON:0001893!1.57e-24!34;UBERON:0002619!1.00e-23!22;UBERON:0002346!3.83e-23!90;UBERON:0000955!7.65e-23!69;UBERON:0006238!7.65e-23!69;UBERON:0002791!1.94e-22!33;UBERON:0001017!1.26e-21!82;UBERON:0000956!1.39e-20!25;UBERON:0000203!1.39e-20!25;UBERON:0005743!2.62e-20!86;UBERON:0000073!3.18e-19!94;UBERON:0001016!3.18e-19!94;UBERON:0001950!3.31e-19!20;UBERON:0003056!8.66e-19!61;UBERON:0000025!9.78e-14!194;UBERON:0000481!1.25e-11!347;UBERON:0000153!2.52e-11!129;UBERON:0007811!2.52e-11!129;UBERON:0000033!3.66e-11!123;UBERON:0003978!5.81e-11!3;UBERON:0009751!5.81e-11!3;UBERON:0000946!5.81e-11!3;UBERON:0002523!5.81e-11!3;UBERON:0005983!5.81e-11!3;UBERON:0002165!5.81e-11!3;UBERON:0002062!5.81e-11!3;UBERON:0007280!5.81e-11!3;UBERON:0004907!8.18e-11!5;UBERON:0001872!1.16e-10!5;UBERON:0000059!1.88e-10!11;UBERON:0004121!2.32e-10!169;UBERON:0004111!5.24e-10!241;UBERON:0000924!5.94e-10!173;UBERON:0006601!5.94e-10!173;UBERON:0000064!1.61e-09!219;UBERON:0000200!9.69e-09!6;UBERON:0000477!2.82e-08!286;UBERON:0000483!3.21e-08!309;UBERON:0002308!3.83e-08!9;UBERON:0000125!3.83e-08!9;UBERON:0001052!4.05e-08!4;UBERON:0000160!4.57e-08!27;UBERON:0000119!4.77e-08!312;UBERON:0000007!4.95e-08!2;UBERON:0002133!5.85e-08!2;UBERON:0002081!7.14e-08!2;UBERON:0001894!1.85e-07!7;UBERON:0006222!1.85e-07!7;UBERON:0001954!3.78e-07!2;UBERON:0003022!3.78e-07!2;UBERON:0002421!3.78e-07!2;UBERON:0002600!3.78e-07!2;UBERON:0000062!4.26e-07!511;UBERON:0002360!6.59e-07!2;UBERON:0000094!6.59e-07!2;UBERON:0007645!6.59e-07!2;UBERON:0002148!7.44e-07!2;UBERON:0009662!7.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.72e-33;17!UBERON:0000007;3.37e-26;2!UBERON:0002133;7.20e-26;2!UBERON:0005409;7.40e-26;22!UBERON:0002081;1.12e-25;2!UBERON:0002108;9.21e-23;4!UBERON:0000059;1.74e-18;11!UBERON:0003978;1.33e-17;3!UBERON:0000946;1.33e-17;3!UBERON:0004151;1.79e-17;3!UBERON:0004921;1.00e-15;33!UBERON:0002135;4.25e-14;1!UBERON:0002079;6.65e-14;1!UBERON:0003296;1.30e-13;4!UBERON:0010133;1.30e-13;4!UBERON:0002134;1.42e-13;1!UBERON:0005208;1.42e-13;1!UBERON:0004145;1.42e-13;1!UBERON:0005946;1.42e-13;1!UBERON:0005965;1.42e-13;1!UBERON:0002078;1.42e-13;1!UBERON:0001052;1.62e-13;4!UBERON:0001155;3.89e-13;9!UBERON:0004907;5.29e-11;5!UBERON:0001894;3.64e-08;7!UBERON:0002771;1.99e-07;2!UBERON:0001555;2.30e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-33,17;UBERON:0000007,3.59e-26,2;UBERON:0002133,6.76e-26,2;UBERON:0002081,1.44e-25,2;UBERON:0010227,1.44e-25,2;UBERON:0005409,7.04e-23,25;UBERON:0002108,1.07e-22,4;UBERON:0000059,1.33e-18,11;UBERON:0003978,1.28e-17,3;UBERON:0009751,1.28e-17,3;UBERON:0000946,1.28e-17,3;UBERON:0002523,1.28e-17,3;UBERON:0005983,1.28e-17,3;UBERON:0002165,1.28e-17,3;UBERON:0002062,1.28e-17,3;UBERON:0007280,1.28e-17,3;UBERON:0004151,2.11e-17,3;UBERON:0002135,3.98e-14,1;UBERON:0002079,8.58e-14,1;UBERON:0001052,1.34e-13,4;UBERON:0003296,1.34e-13,4;UBERON:0010133,1.34e-13,4;UBERON:0002134,1.42e-13,1;UBERON:0005208,1.42e-13,1;UBERON:0005946,1.42e-13,1;UBERON:0005965,1.42e-13,1;UBERON:0002078,1.42e-13,1;UBERON:0001155,3.30e-13,9;UBERON:0004907,4.55e-11,5;UBERON:0007023,1.01e-09,114;UBERON:0001894,3.70e-08,7;UBERON:0006222,3.70e-08,7;UBERON:0004797,4.42e-08,7;UBERON:0011216,1.28e-07,223;UBERON:0004921,1.86e-07,118;UBERON:0002771,2.25e-07,2 | |||
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| ||
|short_description=p2@HTR4 | |short_description=p2@HTR4 | ||
}} | }} |
Latest revision as of 00:23, 16 September 2015
Short description: | p2@HTR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HTR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524063_5end |
EntrezGene: | HTR4 |
HGNC: | 5299 |
UniProt: | E5RK45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.07e-33 | 17 |
pituitary gland | 3.59e-26 | 2 |
atrioventricular valve | 6.76e-26 | 2 |
cardiac atrium | 1.44e-25 | 2 |
future cardiac atrium | 1.44e-25 | 2 |
gastrointestinal system | 7.04e-23 | 25 |
small intestine | 1.07e-22 | 4 |
large intestine | 1.33e-18 | 11 |
valve | 1.28e-17 | 3 |
cardiac mesenchyme | 1.28e-17 | 3 |
cardial valve | 1.28e-17 | 3 |
tunica intima | 1.28e-17 | 3 |
heart layer | 1.28e-17 | 3 |
endocardium | 1.28e-17 | 3 |
endocardial cushion | 1.28e-17 | 3 |
presumptive endocardium | 1.28e-17 | 3 |
cardiac chamber | 2.11e-17 | 3 |
mitral valve | 3.98e-14 | 1 |
left cardiac atrium | 8.58e-14 | 1 |
rectum | 1.34e-13 | 4 |
gland of diencephalon | 1.34e-13 | 4 |
neuroendocrine gland | 1.34e-13 | 4 |
tricuspid valve | 1.42e-13 | 1 |
right atrium valve | 1.42e-13 | 1 |
outflow tract of atrium | 1.42e-13 | 1 |
outflow part of right atrium | 1.42e-13 | 1 |
right cardiac atrium | 1.42e-13 | 1 |
colon | 3.30e-13 | 9 |
lower digestive tract | 4.55e-11 | 5 |
adult organism | 1.01e-09 | 114 |
diencephalon | 3.70e-08 | 7 |
future diencephalon | 3.70e-08 | 7 |
blood vessel layer | 4.42e-08 | 7 |
organ system subdivision | 1.28e-07 | 223 |
subdivision of digestive tract | 1.86e-07 | 118 |
middle temporal gyrus | 2.25e-07 | 2 |