FFCP PHASE1:Hg19::chr12:105724535..105724548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387882 | |EntrezGene=387882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |HGNC=35164 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXK5 | |UniProt=F8VXK5 | ||
|association_with_transcript=47bp_to_ENST00000549893_5end | |association_with_transcript=47bp_to_ENST00000549893_5end | ||
|cluster_id=chr12:105724535..105724548,+ | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_3_at_C12orf75_5end | |description=CAGE_peak_3_at_C12orf75_5end | ||
|id=chr12:105724535..105724548,+ | |id=chr12:105724535..105724548,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.43e-15!180;CL:0000144!2.76e-14!625;CL:0000057!1.08e-13!75;CL:0000003!1.41e-13!722;CL:0002371!1.06e-12!591;CL:0002620!3.58e-11!23;CL:0000012!2.49e-10!682;CL:0000548!6.57e-10!679;CL:0000004!6.57e-10!679;CL:0000255!6.57e-10!679;CL:0000192!1.50e-09!42;CL:0000514!1.50e-09!42;CL:0000048!1.58e-09!430;CL:0000723!2.67e-09!436;CL:0000359!4.62e-09!32;CL:0000034!8.69e-09!444;CL:0000183!7.24e-08!59;CL:0000542!8.35e-08!53;CL:0000051!8.35e-08!53;CL:0000838!1.00e-07!52;CL:0000680!1.41e-07!57;CL:0000056!1.41e-07!57;CL:0000355!1.41e-07!57;CL:0000187!3.90e-07!54;CL:1000497!4.01e-07!18;CL:0002518!4.01e-07!18;CL:1000449!5.14e-07!16;CL:0000084!6.37e-07!25;CL:0000827!6.37e-07!25 | |ontology_enrichment_celltype=CL:0000055!5.43e-15!180;CL:0000144!2.76e-14!625;CL:0000057!1.08e-13!75;CL:0000003!1.41e-13!722;CL:0002371!1.06e-12!591;CL:0002620!3.58e-11!23;CL:0000012!2.49e-10!682;CL:0000548!6.57e-10!679;CL:0000004!6.57e-10!679;CL:0000255!6.57e-10!679;CL:0000192!1.50e-09!42;CL:0000514!1.50e-09!42;CL:0000048!1.58e-09!430;CL:0000723!2.67e-09!436;CL:0000359!4.62e-09!32;CL:0000034!8.69e-09!444;CL:0000183!7.24e-08!59;CL:0000542!8.35e-08!53;CL:0000051!8.35e-08!53;CL:0000838!1.00e-07!52;CL:0000680!1.41e-07!57;CL:0000056!1.41e-07!57;CL:0000355!1.41e-07!57;CL:0000187!3.90e-07!54;CL:1000497!4.01e-07!18;CL:0002518!4.01e-07!18;CL:1000449!5.14e-07!16;CL:0000084!6.37e-07!25;CL:0000827!6.37e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.02e-11;23!CL:0000359;1.84e-09;32!CL:1000497;5.19e-09;17!CL:0002518;5.19e-09;17!CL:1000449;5.91e-09;15!CL:1000507;1.72e-08;10!CL:1000494;1.72e-08;10!CL:0000084;3.11e-07;25!CL:0002681;6.52e-07;12!CL:0002584;6.52e-07;12!CL:0000192;7.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.13e-14,76;CL:0000048,1.11e-12,427;CL:0000723,3.85e-12,433;CL:0002620,1.16e-11,23;CL:0000034,1.86e-11,441;CL:0000359,9.28e-10,32;CL:0000192,3.30e-09,43;CL:0000514,3.30e-09,43;CL:1000497,6.79e-09,17;CL:0002518,6.79e-09,17;CL:1000449,7.17e-09,15;CL:1000507,1.83e-08,10;CL:1000494,1.83e-08,10;CL:0000134,2.72e-08,354;CL:0002320,4.09e-08,361;CL:0000542,2.34e-07,53;CL:0000051,2.34e-07,53;CL:0000838,2.86e-07,52;CL:0000680,3.55e-07,58;CL:0000056,3.55e-07,58;CL:0000355,3.55e-07,58;CL:0000084,4.11e-07,25;CL:0000827,4.11e-07,25;CL:0002681,7.81e-07,12;CL:0002584,7.81e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;7.85e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.81e-12!83;UBERON:0002329!4.81e-12!83;UBERON:0003077!4.81e-12!83;UBERON:0003059!4.81e-12!83;UBERON:0007282!4.81e-12!83;UBERON:0009618!4.81e-12!83;UBERON:0007285!4.81e-12!83;UBERON:0004290!1.24e-09!70;UBERON:0005256!7.71e-09!143;UBERON:0000486!1.16e-08!82;UBERON:0002097!3.54e-08!40;UBERON:0002199!6.30e-08!45;UBERON:0002416!6.30e-08!45;UBERON:0004211!5.14e-07!16;UBERON:0001285!5.14e-07!16;UBERON:0007684!5.14e-07!16;UBERON:0003220!5.14e-07!16;UBERON:0004208!5.14e-07!16;UBERON:0001134!6.14e-07!61;UBERON:0002036!6.14e-07!61;UBERON:0003082!6.14e-07!61 | |ontology_enrichment_uberon=UBERON:0000914!4.81e-12!83;UBERON:0002329!4.81e-12!83;UBERON:0003077!4.81e-12!83;UBERON:0003059!4.81e-12!83;UBERON:0007282!4.81e-12!83;UBERON:0009618!4.81e-12!83;UBERON:0007285!4.81e-12!83;UBERON:0004290!1.24e-09!70;UBERON:0005256!7.71e-09!143;UBERON:0000486!1.16e-08!82;UBERON:0002097!3.54e-08!40;UBERON:0002199!6.30e-08!45;UBERON:0002416!6.30e-08!45;UBERON:0004211!5.14e-07!16;UBERON:0001285!5.14e-07!16;UBERON:0007684!5.14e-07!16;UBERON:0003220!5.14e-07!16;UBERON:0004208!5.14e-07!16;UBERON:0001134!6.14e-07!61;UBERON:0002036!6.14e-07!61;UBERON:0003082!6.14e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.91e-09;15!UBERON:0004819;5.91e-09;15!UBERON:0001285;5.91e-09;15!UBERON:0007684;5.91e-09;15!UBERON:0004211;1.72e-08;10!UBERON:0009773;1.72e-08;10!UBERON:0001231;1.72e-08;10!UBERON:0004810;1.72e-08;10!UBERON:0001225;6.52e-07;12!UBERON:0008987;6.52e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.04e-11,78;UBERON:0007524,3.77e-09,73;UBERON:0002329,3.82e-09,71;UBERON:0003059,3.82e-09,71;UBERON:0007282,3.82e-09,71;UBERON:0004290,3.82e-09,71;UBERON:0009618,3.82e-09,71;UBERON:0004211,7.17e-09,15;UBERON:0009773,7.17e-09,15;UBERON:0001231,7.17e-09,15;UBERON:0001285,7.17e-09,15;UBERON:0007684,7.17e-09,15;UBERON:0004208,7.17e-09,15;UBERON:0003077,9.74e-09,72;UBERON:0007285,9.74e-09,72;UBERON:0004810,1.83e-08,10;UBERON:0002384,2.07e-08,371;UBERON:0000486,4.93e-08,83;UBERON:0002097,5.40e-08,41;UBERON:0006555,8.01e-08,16;UBERON:0004819,8.01e-08,16;UBERON:0002199,1.40e-07,46;UBERON:0002416,1.40e-07,46;UBERON:0001225,7.81e-07,12;UBERON:0008987,7.81e-07,12 | |||
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| ||
|short_description=p3@C12orf75 | |short_description=p3@C12orf75 | ||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p3@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | 47bp_to_ENST00000549893_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | F8VXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.13e-14 | 76 |
multi fate stem cell | 1.11e-12 | 427 |
somatic stem cell | 3.85e-12 | 433 |
skin fibroblast | 1.16e-11 | 23 |
stem cell | 1.86e-11 | 441 |
vascular associated smooth muscle cell | 9.28e-10 | 32 |
smooth muscle cell | 3.30e-09 | 43 |
smooth muscle myoblast | 3.30e-09 | 43 |
kidney cell | 6.79e-09 | 17 |
kidney epithelial cell | 6.79e-09 | 17 |
epithelial cell of nephron | 7.17e-09 | 15 |
kidney tubule cell | 1.83e-08 | 10 |
nephron tubule epithelial cell | 1.83e-08 | 10 |
mesenchymal cell | 2.72e-08 | 354 |
connective tissue cell | 4.09e-08 | 361 |
lymphocyte | 2.34e-07 | 53 |
common lymphoid progenitor | 2.34e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-07 | 52 |
muscle precursor cell | 3.55e-07 | 58 |
myoblast | 3.55e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.55e-07 | 58 |
T cell | 4.11e-07 | 25 |
pro-T cell | 4.11e-07 | 25 |
kidney cortical cell | 7.81e-07 | 12 |
renal cortical epithelial cell | 7.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.04e-11 | 78 |
dense mesenchyme tissue | 3.77e-09 | 73 |
somite | 3.82e-09 | 71 |
presomitic mesoderm | 3.82e-09 | 71 |
presumptive segmental plate | 3.82e-09 | 71 |
dermomyotome | 3.82e-09 | 71 |
trunk paraxial mesoderm | 3.82e-09 | 71 |
nephron epithelium | 7.17e-09 | 15 |
renal tubule | 7.17e-09 | 15 |
nephron tubule | 7.17e-09 | 15 |
nephron | 7.17e-09 | 15 |
uriniferous tubule | 7.17e-09 | 15 |
nephrogenic mesenchyme | 7.17e-09 | 15 |
paraxial mesoderm | 9.74e-09 | 72 |
presumptive paraxial mesoderm | 9.74e-09 | 72 |
nephron tubule epithelium | 1.83e-08 | 10 |
connective tissue | 2.07e-08 | 371 |
multilaminar epithelium | 4.93e-08 | 83 |
skin of body | 5.40e-08 | 41 |
excretory tube | 8.01e-08 | 16 |
kidney epithelium | 8.01e-08 | 16 |
integument | 1.40e-07 | 46 |
integumental system | 1.40e-07 | 46 |
cortex of kidney | 7.81e-07 | 12 |
renal parenchyma | 7.81e-07 | 12 |