FFCP PHASE1:Hg19::chrX:55246818..55246829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90737 | |EntrezGene=90737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29992 | |HGNC=29992 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUL1 | |UniProt=Q5JUL1 | ||
|association_with_transcript=-23bp_to_ENST00000374952_5end | |association_with_transcript=-23bp_to_ENST00000374952_5end | ||
|cluster_id=chrX:55246818..55246829,+ | |||
|coexpression_cluster_id=C4876 | |coexpression_cluster_id=C4876 | ||
|description=CAGE_peak_2_at_PAGE5_5end | |description=CAGE_peak_2_at_PAGE5_5end | ||
|id=chrX:55246818..55246829,+ | |id=chrX:55246818..55246829,+ | ||
|ontology_enrichment_celltype=CL:0000054!5.88e-14!2;CL:0000137!5.88e-14!2;CL:0000092!5.88e-14!2;CL:0002178!1.46e-09!3;CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1 | |ontology_enrichment_celltype=CL:0000054!5.88e-14!2;CL:0000137!5.88e-14!2;CL:0000092!5.88e-14!2;CL:0002178!1.46e-09!3;CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;4.89e-23;2!CL:0000137;4.89e-23;2!CL:0000092;4.89e-23;2!CL:0002178;1.32e-15;3!CL:0002127;7.03e-13;1!CL:0000911;7.03e-13;1!CL:0000814;7.03e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,4.89e-23,2;CL:0000137,4.89e-23,2;CL:0000092,4.89e-23,2;CL:0002178,1.22e-15,3;CL:0002127,7.03e-13,1;CL:0000914,7.03e-13,1;CL:0000911,7.03e-13,1;CL:0000814,7.03e-13,1;CL:0002042,7.03e-13,1;CL:0002039,7.03e-13,1;CL:0002040,7.03e-13,1;CL:0002041,7.03e-13,1;CL:0000893,4.56e-07,2;CL:0002489,4.56e-07,2;CL:0000809,4.56e-07,2;CL:0000808,4.56e-07,2;CL:0000894,4.56e-07,2;CL:0000806,4.56e-07,2;CL:0000807,4.56e-07,2;CL:0000805,4.56e-07,2;CL:0002425,4.56e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;4.56e-07;2 | |||
|ontology_enrichment_disease=DOID:200!5.88e-14!2;DOID:4305!5.88e-14!2;DOID:1036!7.77e-13!8;DOID:201!2.98e-10!6;DOID:0060100!2.98e-10!6;DOID:0060085!5.58e-08!1;DOID:3165!5.58e-08!1;DOID:0060121!5.58e-08!1;DOID:2438!5.58e-08!1;DOID:4418!5.58e-08!1;DOID:2531!6.69e-07!51;DOID:0060083!6.69e-07!51 | |ontology_enrichment_disease=DOID:200!5.88e-14!2;DOID:4305!5.88e-14!2;DOID:1036!7.77e-13!8;DOID:201!2.98e-10!6;DOID:0060100!2.98e-10!6;DOID:0060085!5.58e-08!1;DOID:3165!5.58e-08!1;DOID:0060121!5.58e-08!1;DOID:2438!5.58e-08!1;DOID:4418!5.58e-08!1;DOID:2531!6.69e-07!51;DOID:0060083!6.69e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:200;4.89e-23;2!DOID:4305;4.89e-23;2!DOID:201;4.13e-17;6!DOID:0060100;4.13e-17;6!DOID:1036;6.20e-13;8!DOID:0060085;1.11e-12;1!DOID:3165;1.11e-12;1!DOID:0060121;1.11e-12;1!DOID:2438;1.11e-12;1!DOID:4418;1.11e-12;1!DOID:2531;1.92e-08;51!DOID:0060083;1.92e-08;51!DOID:3910;5.11e-07;2!DOID:3493;6.80e-07;2!DOID:4231;9.02e-07;2!DOID:1907;9.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,4.89e-23,2;DOID:4305,4.89e-23,2;DOID:201,4.14e-17,6;DOID:0060100,4.14e-17,6;DOID:1036,6.20e-13,8;DOID:0060085,1.11e-12,1;DOID:3165,1.11e-12,1;DOID:0060121,1.11e-12,1;DOID:2438,1.11e-12,1;DOID:4418,1.11e-12,1;DOID:2531,5.01e-10,51;DOID:0060083,5.01e-10,51;DOID:0050686,3.47e-08,137;DOID:162,3.30e-07,235;DOID:1240,4.79e-07,39;DOID:3910,5.11e-07,2;DOID:14566,5.16e-07,239;DOID:3493,6.80e-07,2;DOID:4231,9.02e-07,2;DOID:1907,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!7.26e-08!1;UBERON:0009842!7.26e-08!1;UBERON:0003704!7.26e-08!1;UBERON:0001171!7.26e-08!1;UBERON:0001172!7.26e-08!1;UBERON:0007195!1.22e-07!1 | |ontology_enrichment_uberon=UBERON:0001282!7.26e-08!1;UBERON:0009842!7.26e-08!1;UBERON:0003704!7.26e-08!1;UBERON:0001171!7.26e-08!1;UBERON:0001172!7.26e-08!1;UBERON:0007195!1.22e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.08e-12;1!UBERON:0009842;2.08e-12;1!UBERON:0003704;2.08e-12;1!UBERON:0001171;2.08e-12;1!UBERON:0001172;2.08e-12;1!UBERON:0007195;3.85e-12;1!UBERON:0000945;9.70e-10;5!UBERON:0010039;9.70e-10;5!UBERON:0002371;8.31e-09;12!UBERON:0004903;5.11e-07;2!UBERON:0002173;5.11e-07;2!UBERON:0002186;5.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.75e-12,1;UBERON:0009842,1.75e-12,1;UBERON:0003704,1.75e-12,1;UBERON:0001171,1.75e-12,1;UBERON:0001172,1.75e-12,1;UBERON:0007195,4.31e-12,1;UBERON:0004903,5.11e-07,2;UBERON:0002173,5.11e-07,2;UBERON:0002186,5.11e-07,2 | |||
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|short_description=p2@PAGE5 | |short_description=p2@PAGE5 | ||
}} | }} |
Latest revision as of 01:49, 16 September 2015
Short description: | p2@PAGE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAGE5_5end |
Coexpression cluster: | C4876_lymphangiectasia_NK_bronchioalveolar_fibrosarcoma_thyroid_fibrous_cholangiocellular |
Association with transcript: | -23bp_to_ENST00000374952_5end |
EntrezGene: | PAGE5 |
HGNC: | 29992 |
UniProt: | Q5JUL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 4.89e-23 | 2 |
osteocyte | 4.89e-23 | 2 |
osteoclast | 4.89e-23 | 2 |
epithelial cell of stomach | 1.22e-15 | 3 |
innate effector T cell | 7.03e-13 | 1 |
immature NK T cell | 7.03e-13 | 1 |
effector T cell | 7.03e-13 | 1 |
mature NK T cell | 7.03e-13 | 1 |
immature NK T cell stage IV | 7.03e-13 | 1 |
immature NK T cell stage I | 7.03e-13 | 1 |
immature NK T cell stage II | 7.03e-13 | 1 |
immature NK T cell stage III | 7.03e-13 | 1 |
thymocyte | 4.56e-07 | 2 |
double negative thymocyte | 4.56e-07 | 2 |
double-positive, alpha-beta thymocyte | 4.56e-07 | 2 |
DN4 thymocyte | 4.56e-07 | 2 |
DN1 thymic pro-T cell | 4.56e-07 | 2 |
DN2 thymocyte | 4.56e-07 | 2 |
DN3 thymocyte | 4.56e-07 | 2 |
immature single positive thymocyte | 4.56e-07 | 2 |
early T lineage precursor | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.75e-12 | 1 |
acinus | 1.75e-12 | 1 |
intrahepatic bile duct | 1.75e-12 | 1 |
portal lobule | 1.75e-12 | 1 |
hepatic acinus | 1.75e-12 | 1 |
stroma of bone marrow | 4.31e-12 | 1 |
bronchoalveolar duct junction | 5.11e-07 | 2 |
alveolar duct | 5.11e-07 | 2 |
bronchiole | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 4.89e-23 | 2 |
bone giant cell tumor | 4.89e-23 | 2 |
connective tissue cancer | 4.14e-17 | 6 |
musculoskeletal system cancer | 4.14e-17 | 6 |
chronic leukemia | 6.20e-13 | 8 |
organ system benign neoplasm | 1.11e-12 | 1 |
skin benign neoplasm | 1.11e-12 | 1 |
integumentary system benign neoplasm | 1.11e-12 | 1 |
dermis tumor | 1.11e-12 | 1 |
cutaneous fibrous histiocytoma | 1.11e-12 | 1 |
hematologic cancer | 5.01e-10 | 51 |
immune system cancer | 5.01e-10 | 51 |
organ system cancer | 3.47e-08 | 137 |
cancer | 3.30e-07 | 235 |
leukemia | 4.79e-07 | 39 |
lung adenocarcinoma | 5.11e-07 | 2 |
disease of cellular proliferation | 5.16e-07 | 239 |
signet ring cell adenocarcinoma | 6.80e-07 | 2 |
histiocytoma | 9.02e-07 | 2 |
malignant fibroxanthoma | 9.02e-07 | 2 |