FFCP PHASE1:Hg19::chr9:134152345..134152369,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286336 | |EntrezGene=286336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25465 | |HGNC=25465 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUQ0 | |UniProt=Q5JUQ0 | ||
|association_with_transcript=-411bp_to_ENST00000372271_5end | |association_with_transcript=-411bp_to_ENST00000372271_5end | ||
|cluster_id=chr9:134152345..134152369,- | |||
|coexpression_cluster_id=C2938 | |||
|description=CAGE_peak_1_at_FAM78A_5end | |description=CAGE_peak_1_at_FAM78A_5end | ||
|id=chr9:134152345..134152369,- | |id=chr9:134152345..134152369,- | ||
|ontology_enrichment_celltype=CL:0000988!2.34e-59!182;CL:0000037!4.19e-59!172;CL:0000566!4.19e-59!172;CL:0002032!8.17e-56!165;CL:0000837!8.17e-56!165;CL:0002087!1.55e-41!119;CL:0000738!1.11e-39!140;CL:0002031!3.98e-36!124;CL:0000763!4.86e-36!112;CL:0000049!4.86e-36!112;CL:0000766!2.40e-22!76;CL:0002194!1.59e-21!63;CL:0000576!1.59e-21!63;CL:0000040!1.59e-21!63;CL:0000559!1.59e-21!63;CL:0002009!3.37e-20!65;CL:0000839!4.12e-20!70;CL:0000557!4.50e-19!71;CL:0000542!6.39e-17!53;CL:0000051!6.39e-17!53;CL:0000838!1.21e-16!52;CL:0002057!3.52e-15!42;CL:0000791!5.70e-14!18;CL:0000789!5.70e-14!18;CL:0002420!5.70e-14!18;CL:0002419!5.70e-14!18;CL:0000790!5.70e-14!18;CL:0000084!1.89e-13!25;CL:0000827!1.89e-13!25;CL:0000860!3.26e-13!45;CL:0000625!4.16e-09!11;CL:0000134!5.71e-08!358;CL:0002320!1.19e-07!365 | |ontology_enrichment_celltype=CL:0000988!2.34e-59!182;CL:0000037!4.19e-59!172;CL:0000566!4.19e-59!172;CL:0002032!8.17e-56!165;CL:0000837!8.17e-56!165;CL:0002087!1.55e-41!119;CL:0000738!1.11e-39!140;CL:0002031!3.98e-36!124;CL:0000763!4.86e-36!112;CL:0000049!4.86e-36!112;CL:0000766!2.40e-22!76;CL:0002194!1.59e-21!63;CL:0000576!1.59e-21!63;CL:0000040!1.59e-21!63;CL:0000559!1.59e-21!63;CL:0002009!3.37e-20!65;CL:0000839!4.12e-20!70;CL:0000557!4.50e-19!71;CL:0000542!6.39e-17!53;CL:0000051!6.39e-17!53;CL:0000838!1.21e-16!52;CL:0002057!3.52e-15!42;CL:0000791!5.70e-14!18;CL:0000789!5.70e-14!18;CL:0002420!5.70e-14!18;CL:0002419!5.70e-14!18;CL:0000790!5.70e-14!18;CL:0000084!1.89e-13!25;CL:0000827!1.89e-13!25;CL:0000860!3.26e-13!45;CL:0000625!4.16e-09!11;CL:0000134!5.71e-08!358;CL:0002320!1.19e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.64e-20;18!CL:0000789;5.64e-20;18!CL:0002419;5.64e-20;18!CL:0000084;5.55e-17;25!CL:0000625;9.04e-13;11!CL:0000763;6.11e-11;100!CL:0000988;3.60e-09;177!CL:0002087;5.39e-09;104!CL:0000576;2.49e-08;48!CL:0000624;5.18e-08;6!CL:0000766;1.78e-07;69!CL:0002393;6.91e-07;6!CL:0002397;6.91e-07;6!CL:0000738;9.43e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.73e-51,177;CL:0000037,2.60e-50,168;CL:0002032,7.67e-48,161;CL:0000837,7.67e-48,161;CL:0002087,4.31e-34,115;CL:0000763,2.47e-33,108;CL:0000049,2.47e-33,108;CL:0000738,8.98e-32,136;CL:0002031,1.41e-27,120;CL:0000791,6.96e-20,18;CL:0000789,6.96e-20,18;CL:0002420,6.96e-20,18;CL:0002419,6.96e-20,18;CL:0000790,6.96e-20,18;CL:0002194,1.64e-18,59;CL:0000576,1.64e-18,59;CL:0000040,1.64e-18,59;CL:0000559,1.64e-18,59;CL:0000766,2.56e-18,72;CL:0002009,1.66e-17,61;CL:0000084,6.20e-17,25;CL:0000827,6.20e-17,25;CL:0000557,5.19e-16,67;CL:0000839,2.79e-15,66;CL:0000838,3.89e-13,52;CL:0000542,1.04e-12,53;CL:0000051,1.04e-12,53;CL:0000625,1.06e-12,11;CL:0000473,3.89e-11,48;CL:0000234,3.89e-11,48;CL:0000134,3.29e-10,354;CL:0002320,7.22e-10,361;CL:0002393,5.64e-09,9;CL:0002397,5.64e-09,9;CL:0000624,5.47e-08,6;CL:0000860,7.25e-08,42;CL:0002057,7.25e-08,42;CL:0000219,1.05e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;5.64e-20;18!CL:0000049;1.88e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!2.37e-19!31;DOID:1240!1.69e-18!39;DOID:2531!4.19e-16!51;DOID:0060083!4.19e-16!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.57e-23;31!DOID:1240;1.03e-17;39!DOID:2531;3.36e-11;51!DOID:0060083;3.36e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.43e-24,31;DOID:1240,1.29e-22,39;DOID:2531,7.40e-16,51;DOID:0060083,7.40e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.59e-26!102;UBERON:0003061!2.59e-26!102;UBERON:0002193!2.98e-24!112;UBERON:0002371!5.98e-16!80;UBERON:0001474!5.92e-14!86;UBERON:0002405!8.90e-12!115;UBERON:0000178!1.13e-10!15;UBERON:0000179!1.13e-10!15;UBERON:0000463!1.13e-10!15;UBERON:0007023!4.38e-10!115;UBERON:0004765!4.91e-09!101;UBERON:0001434!4.91e-09!101;UBERON:0003081!1.86e-07!216;UBERON:0002384!9.32e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.17e-15;15!UBERON:0000179;8.17e-15;15!UBERON:0000463;8.17e-15;15!UBERON:0002390;1.85e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.01e-26,98;UBERON:0003061,5.01e-26,98;UBERON:0002193,8.89e-24,108;UBERON:0000178,5.22e-15,15;UBERON:0000179,5.22e-15,15;UBERON:0000463,5.22e-15,15;UBERON:0002405,6.29e-14,93;UBERON:0002371,1.03e-12,76;UBERON:0003081,1.58e-11,203;UBERON:0001474,5.90e-11,82;UBERON:0002384,3.16e-09,371;UBERON:0004765,5.05e-09,90;UBERON:0001434,4.10e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.23150884174919,1.49550484495991,5.90046415273356,4.98978217526377,8.51488678238418,0,0,0,0.0774672005803016,0.995184627411951,0.880801318004542,5.53995408531877,4.8130667392834,4.99125002646459,5.82180233023803,7.12566065241755,5.40908692031792,4.21654892460738,3.40088349319928,3.88134497900506,0.929716147622738,0.822335776043652,0.619412741790207,0.575384784644301,1.5369642391746,0.945928919554341,1.72372840368309,1.29096936716765,2.70852973188684,0.752969358170419,1.09162460023138,0.674170453335254,0.918251677112708,0.320929027076094,1.27867425159808,0.659702600373432,0.797854630486527,0.852449501065388,0,0,0.622822248995575,1.00499466102697,0.521482918420201,1.73751075764093,0.605399502633369,0.368277635987565,1.26584954976354,3.80259515361495,4.67729459923096,2.72556239160889,4.15615935242032,6.30742949934327,1.92870704036496,2.28010194992999,3.77941686678271,1.27864907635244,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,0,2.24203425192614,1.05353633910031,6.88484195398416,4.32311839024081,9.25206745497792,8.69369776031526,6.8443675993054,6.62826928028627,11.6896037044747,4.56782873229212,7.36514768687093,3.76607620792156,5.95768500283034,9.60684897942564,8.45385759139208,10.3595879900316,12.1594007825773,15.0697604582227,9.49034004237187,4.81573490561484,6.27213142829861,5.21222976408804,4.21542542962113,6.18529401868734,3.54227568827304,5.73417745783374,5.20866763085135,3.8018081777935,5.27012916772205,7.16725022464743,2.49861453104692,4.73554504088034,3.28451198768419,12.9028315663829,12.5696892018248,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.37528029272598,0,0,7.46459005405772,7.31344896656922,9.70593111787716,5.24679373471752,0.571994910780128,2.97166001063652,0.198762407366705,0,1.04142150482278,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,3.83988831621543,2.46982309888787,1.57656072676651,1.53316637465883,0,3.29763139074733,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,3.32986340818849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,5.66299114001014,9.36017060556951,7.58018927672514,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,1.52394946301206,1.14596527667483,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,6.52934218861764,0,0,0,0,0,0,0,3.58672460779287,13.0040301733272,11.4282614675544,9.24069861214188,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,0.343143423810856,8.47748907103838,8.62856803274467,10.4593006647375,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,2.27466768141793,0.680374821106063,1.29549549661284,6.16909010761157,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,3.73934549716297,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,3.04468565539302,3.0585488285695,2.84823593587081,1.90585420366231,3.29089818468955,3.8908398671563,4.32025149790492,4.75875105776562,0,0,0,0.743212700502875,0,1.28055318027145,0,4.19116680008915,1.1490322207942,0.211673582723883,2.59697552219644,2.80797178113459,7.98821376616173,5.48379635205581,2.50634477090067,2.20079311142084,11.8835175576738,6.45759063011352,0.851692475380653,3.09154810280188,6.14481528616916,9.8417487472663,9.34355193586688,2.73543333562856,6.40334199959057,8.61611792633986,4.32729085561573,2.99764771198038,1.4098700508785,0,1.02555725490326,0,1.44876399560722,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0.398495976502139,0.828851746593443,0,0,1.35393286007176,0,0,0,4.60415133204185,0.0986434056369336,9.57932369387759,0,0,0.278304294485554,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0.658156191461918,0,0,0.153900517007594,0,3.91958637459702,3.05175990993225,3.69401064534827,1.27600463892768,4.21348929648567,4.79731298416771,0,4.55242743545572,3.32423363800313,7.89584812160132,7.4503763040741,7.21632823996124,1.89753732724185,0.635746315921515,0,0,0,0,0.995261931078505,0.530745387020035,0,1.77912677208373,2.84197059576957,4.80340967725095,0.741412462787447,1.60515529459758,0.468528891450678,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,2.71176888936639,0,0.397429223405979,0.379864775735272,1.95551382734803,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,5.10986352267889,0,2.89176089707246,2.23425921017803,4.8123689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| ||
|short_description=p1@FAM78A | |short_description=p1@FAM78A | ||
}} | }} |
Latest revision as of 02:23, 16 September 2015
Short description: | p1@FAM78A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM78A_5end |
Coexpression cluster: | C2938_CD4_Peripheral_CD8_Natural_acute_chronic_Renal |
Association with transcript: | -411bp_to_ENST00000372271_5end |
EntrezGene: | FAM78A |
HGNC: | 25465 |
UniProt: | Q5JUQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.01e-26 | 98 |
blood island | 5.01e-26 | 98 |
hemolymphoid system | 8.89e-24 | 108 |
blood | 5.22e-15 | 15 |
haemolymphatic fluid | 5.22e-15 | 15 |
organism substance | 5.22e-15 | 15 |
immune system | 6.29e-14 | 93 |
bone marrow | 1.03e-12 | 76 |
lateral plate mesoderm | 1.58e-11 | 203 |
bone element | 5.90e-11 | 82 |
connective tissue | 3.16e-09 | 371 |
skeletal element | 5.05e-09 | 90 |
skeletal system | 4.10e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.43e-24 | 31 |
leukemia | 1.29e-22 | 39 |
hematologic cancer | 7.40e-16 | 51 |
immune system cancer | 7.40e-16 | 51 |