FFCP PHASE1:Hg19::chr20:36794902..36794917,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11778 | |||
|TSSclassifier=strong | |||
|UniProt=A2A299 | |||
|association_with_transcript=0bp_to_ENST00000373403_5end | |||
|cluster_id=chr20:36794902..36794917,- | |||
|coexpression_cluster_id=C4030 | |||
|description=CAGE_peak_6_at_TGM2_5end | |||
|id=chr20:36794902..36794917,- | |||
|ontology_enrichment_celltype=CL:0005020!5.80e-07!6;CL:0002138!5.80e-07!6;CL:0005022!5.80e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.32e-18;19!CL:0002577;8.53e-11;3!CL:0002541;1.41e-10;3!CL:0002144;1.39e-09;3!CL:0002504;3.00e-09;3!CL:1000279;3.00e-09;3!CL:1000280;3.00e-09;3!CL:0002536;2.38e-07;2!CL:0002195;4.65e-07;2!CL:0002571;4.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.42e-18,19;CL:0002577,8.43e-11,3;CL:0002541,1.27e-10,3;CL:0002144,1.71e-09,3;CL:0002504,1.92e-09,3;CL:1000279,1.92e-09,3;CL:1000280,1.92e-09,3;CL:0002536,2.28e-07,2;CL:0002195,4.32e-07,2;CL:0002571,4.32e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.97e-13!115;UBERON:0005631!2.19e-12!14;UBERON:0000158!2.19e-12!14;UBERON:0000478!7.17e-11!24;UBERON:0003124!1.92e-10!7;UBERON:0001473!4.79e-09!8;UBERON:0004536!4.79e-09!8;UBERON:0006558!4.79e-09!8;UBERON:0002465!1.45e-08!10;UBERON:0004872!3.27e-08!84;UBERON:0002049!3.94e-08!79;UBERON:0007798!3.94e-08!79;UBERON:0004923!5.38e-08!57;UBERON:0001009!1.42e-07!113;UBERON:0000477!3.15e-07!286;UBERON:0000055!3.94e-07!69;UBERON:0004535!4.45e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.61e-19;24!UBERON:0001987;7.64e-14;4!UBERON:0005631;8.06e-11;10!UBERON:0000158;8.06e-11;10!UBERON:0003124;1.41e-10;3!UBERON:0000920;1.41e-10;3!UBERON:0010523;1.39e-09;3!UBERON:0001915;1.39e-09;3!UBERON:0001982;1.39e-09;3!UBERON:0000160;7.89e-09;17!UBERON:0005409;1.80e-08;22!UBERON:0000077;1.71e-07;27!UBERON:0002081;7.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,9.74e-23,7;UBERON:0005631,2.11e-21,14;UBERON:0000158,2.11e-21,14;UBERON:0000478,2.28e-19,24;UBERON:0001987,7.56e-14,4;UBERON:0004340,7.56e-14,4;UBERON:0005409,3.91e-11,25;UBERON:0000920,1.27e-10,3;UBERON:0010523,1.71e-09,3;UBERON:0001915,1.71e-09,3;UBERON:0001982,1.71e-09,3;UBERON:0000160,6.43e-09,17;UBERON:0004923,3.52e-08,66;UBERON:0002081,5.83e-07,2;UBERON:0010227,5.83e-07,2;UBERON:0000077,6.90e-07,29 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,5.67947567538448,3.69273769519835,0,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0,0,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,2.41697590265488,2.28081631715554,2.4406205754817,0,0,0.535798369704479,0.44905874525234,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0.49333509683432,0.622422070799533,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.989067717114227,0.910161361938026,5.03032699271367,0,0,0,0,0.30648779579902,0.901428353439581,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,1.92972281457866,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0.587043471179108,4.04226053731007,2.31492756288305,6.27838702374174,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.12131084345361,0,0.36669142910475,2.32689088364,0,0,0.797814349754612,0,0,0,0,3.28849385413739,1.08524321078289,0.823240336780769,0,2.84313558994037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,2.9115920614313,0.892144943985809,0.157702415033935,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0,0.195801157462741,0.343143423810856,0,0,0,7.88131685760275,33.2870879020994,21.4697108264073,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,7.10982980369284,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.949138274156178,0.762520775695299,0,0,0,0,4.31693898199955,1.64722217841633,1.41374882814824,0,0,0,3.90106991271672,0,0,1.36499911407986,0.282810863907425,0,0,0,0.876901770507525,0,0,1.42037263873893,1.239293992399,1.12678241012897,0.286822704408103,1.17898849215745,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,6.40177845282098,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,1.90995587790152,0,0.307160702099232,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.438770794307945,0,0,6.84857300683794,0,0,0.807818799687949,2.82483166997221,11.1650405906172,4.8546724502987,15.991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0.606610196826093,0,0,0,0,0,0.394584402849391,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.0633107959558787,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,4.30723814746088,0,0.429226048136571,0.223171457441873,0.604651252380536,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,1.15400093896996,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,1.17466153824464,2.04365596629566,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,3.32787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0,0,0,0.727394636810238,0.107410557042488,0,3.98095888698616,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,2.41801239211839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7562092961788,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,1.42899623863589,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,22.1755925406597,0,0,0,0.197318320688547,0,0,0.863424021355654,0,0,2.73947616152849,0,0,4.00268647389276,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,1.31196068783506,1.5299169235277,0,0.980593287015622,0,0,0,0.4226557275834,0.169927114687817,1.03382309777839,5.47892047775406,0,0,0,0,3.65168194123259,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0,0,0,0.426467963801962,0,0.387533459016037,1.42771842880473,0,1.01835453245064,0,0.217716747896961,0,0.606168477131288,1.2192774916755,0.99798106963804,0,0,0,0,4.69281884806909,4.52293343476606,0,1.99727032255654,0.805095174364105,0 | |||
|short_description=p6@TGM2 | |||
}} |
Latest revision as of 03:17, 16 September 2015
Short description: | p6@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGM2_5end |
Coexpression cluster: | C4030_Placental_placenta_chorionic_cervix_Lymphatic_Amniotic_spleen |
Association with transcript: | 0bp_to_ENST00000373403_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | A2A299 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.42e-18 | 19 |
placental epithelial cell | 8.43e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.27e-10 | 3 |
capillary endothelial cell | 1.71e-09 | 3 |
enteric smooth muscle cell | 1.92e-09 | 3 |
smooth muscle cell of large intestine | 1.92e-09 | 3 |
smooth muscle cell of colon | 1.92e-09 | 3 |
amniotic epithelial cell | 2.28e-07 | 2 |
hepatic stem cell | 4.32e-07 | 2 |
hepatic mesenchymal stem cell | 4.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 9.74e-23 | 7 |
extraembryonic membrane | 2.11e-21 | 14 |
membranous layer | 2.11e-21 | 14 |
extraembryonic structure | 2.28e-19 | 24 |
placenta | 7.56e-14 | 4 |
allantois | 7.56e-14 | 4 |
gastrointestinal system | 3.91e-11 | 25 |
egg chorion | 1.27e-10 | 3 |
microcirculatory vessel | 1.71e-09 | 3 |
endothelium of capillary | 1.71e-09 | 3 |
capillary | 1.71e-09 | 3 |
intestine | 6.43e-09 | 17 |
organ component layer | 3.52e-08 | 66 |
cardiac atrium | 5.83e-07 | 2 |
future cardiac atrium | 5.83e-07 | 2 |
mixed endoderm/mesoderm-derived structure | 6.90e-07 | 29 |