FFCP PHASE1:Hg19::chr6:150326296..150326319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16797 | |HGNC=16797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000403651_5end | |association_with_transcript=-3bp_to_ENST00000403651_5end | ||
|cluster_id=chr6:150326296..150326319,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_RAET1K_5end | |description=CAGE_peak_2_at_RAET1K_5end | ||
|id=chr6:150326296..150326319,- | |id=chr6:150326296..150326319,- | ||
|ontology_enrichment_celltype=CL:0000542!1.57e-09!53;CL:0000051!1.57e-09!53;CL:0000945!1.88e-09!24;CL:0000826!1.88e-09!24;CL:0000838!4.27e-09!52;CL:0000066!1.35e-08!254 | |ontology_enrichment_celltype=CL:0000542!1.57e-09!53;CL:0000051!1.57e-09!53;CL:0000945!1.88e-09!24;CL:0000826!1.88e-09!24;CL:0000838!4.27e-09!52;CL:0000066!1.35e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000817;2.78e-13;1!CL:0002127;6.05e-13;1!CL:0000911;6.05e-13;1!CL:0000814;6.05e-13;1!CL:0002253;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.06e-13,1;CL:0000914,6.06e-13,1;CL:0000911,6.06e-13,1;CL:0000814,6.06e-13,1;CL:0002042,6.06e-13,1;CL:0002039,6.06e-13,1;CL:0002040,6.06e-13,1;CL:0002041,6.06e-13,1;CL:0000988,6.56e-08,177;CL:0000893,4.17e-07,2;CL:0002489,4.17e-07,2;CL:0000809,4.17e-07,2;CL:0000808,4.17e-07,2;CL:0000894,4.17e-07,2;CL:0000806,4.17e-07,2;CL:0000807,4.17e-07,2;CL:0000805,4.17e-07,2;CL:0002425,4.17e-07,2;CL:0002253,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!3.40e-33!239;DOID:162!7.74e-33!235;DOID:305!3.13e-25!106;DOID:0050687!7.40e-24!143;DOID:0050686!6.89e-14!137;DOID:0060058!1.25e-08!10;DOID:1749!4.57e-08!14;DOID:299!7.83e-08!25;DOID:2531!3.35e-07!51;DOID:0060083!3.35e-07!51;DOID:7!3.97e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.75e-11;10!DOID:2531;6.86e-10;51!DOID:0060083;6.86e-10;51!DOID:1240;9.01e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.20e-14,51;DOID:0060083,8.20e-14,51;DOID:0060058,3.88e-11,10;DOID:1240,1.72e-10,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.73e-11;10!UBERON:0000178;7.89e-08;15!UBERON:0000179;7.89e-08;15!UBERON:0000463;7.89e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.73e-11,10;UBERON:0000358,1.73e-11,10;UBERON:0000307,1.73e-11,10;UBERON:0000091,1.73e-11,10;UBERON:0000087,1.73e-11,10;UBERON:0007010,1.73e-11,10;UBERON:0007806,1.73e-11,10;UBERON:0008780,1.73e-11,10;UBERON:0005728,1.73e-11,10;UBERON:0000178,7.89e-08,15;UBERON:0000179,7.89e-08,15;UBERON:0000463,7.89e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0.458480434487708,0.246301768349837,0.708397031823113,0,0,0,0,0.30120591877825,0,0.852139206383318,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,1.52909291250092,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,2.45257662059956,0.142283686696828,0.637705090915289,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,1.23087398947712,1.35227839237992,0,1.4098700508785,0.18714054040822,0,0.121360521749513,3.45474491260183,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0.254253650292766,0.472775363535873,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.448788222048861,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0.326465616318295,0.141353071433941,1.08194319871046,0,0,0,16.3086620774342,11.2443184441318,9.39797545549098,0,0,0,0.364909578431332,0.19566461893209,0.728341138602278,0,0,0,0,1.05226393590145,0.311064574191741,0,0,0.313932918407225,0,0,0.277349346026277,0,0.293977192243133,0.34823682632161,0,0.51595809741485,0.580537987734511,0.584714536689484,0.656923656425674,0,0.0882561266915003,0,0,0.596143835108969,0,0.391102765469606,0.240476460754601,0,0.599428828746391,0,0.114536596165916,0,0.288109595976299,0.372757606696298,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0.295282444544246,0.254019996197353,0,0.136203406111576,0.482259445395058,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0.37494122388632,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0.109209638192014,0.33946505990805,0,0,0,0,1.57723490002507,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.392590874004102,2.47736419030255,0,0.231051332300676,0,0,0.397832444232549,0,0.20170506870352,0,0.261906694481422,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.921871900446234,0.342976018874837,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0.431855182437243,0.9555033757741,0,0,0.348724276104376,0.173858272302579,0,0.207216164163037,0,0,0,0.118332000730565,0.681707238073262,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0.233939463462106,0.994753875806841,0,0.22589216407792,0.109940516745429,0.603851374266694,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0.357107877211315,0.705789743431384,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0,1.06886962106224,0.275684698604535,0.752122617877125,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.814032686109745,0.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| ||
|short_description=p2@RAET1K | |short_description=p2@RAET1K | ||
}} | }} |
Latest revision as of 03:26, 16 September 2015
Short description: | p2@RAET1K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAET1K_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -3bp_to_ENST00000403651_5end |
EntrezGene: | NA |
HGNC: | 16797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.06e-13 | 1 |
immature NK T cell | 6.06e-13 | 1 |
effector T cell | 6.06e-13 | 1 |
mature NK T cell | 6.06e-13 | 1 |
immature NK T cell stage IV | 6.06e-13 | 1 |
immature NK T cell stage I | 6.06e-13 | 1 |
immature NK T cell stage II | 6.06e-13 | 1 |
immature NK T cell stage III | 6.06e-13 | 1 |
hematopoietic cell | 6.56e-08 | 177 |
thymocyte | 4.17e-07 | 2 |
double negative thymocyte | 4.17e-07 | 2 |
double-positive, alpha-beta thymocyte | 4.17e-07 | 2 |
DN4 thymocyte | 4.17e-07 | 2 |
DN1 thymic pro-T cell | 4.17e-07 | 2 |
DN2 thymocyte | 4.17e-07 | 2 |
DN3 thymocyte | 4.17e-07 | 2 |
immature single positive thymocyte | 4.17e-07 | 2 |
early T lineage precursor | 4.17e-07 | 2 |
epithelial cell of large intestine | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.73e-11 | 10 |
blastocyst | 1.73e-11 | 10 |
blastula | 1.73e-11 | 10 |
bilaminar disc | 1.73e-11 | 10 |
inner cell mass | 1.73e-11 | 10 |
cleaving embryo | 1.73e-11 | 10 |
connecting stalk | 1.73e-11 | 10 |
inner cell mass derived epiblast | 1.73e-11 | 10 |
extraembryonic mesoderm | 1.73e-11 | 10 |
blood | 7.89e-08 | 15 |
haemolymphatic fluid | 7.89e-08 | 15 |
organism substance | 7.89e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.20e-14 | 51 |
immune system cancer | 8.20e-14 | 51 |
lymphoma | 3.88e-11 | 10 |
leukemia | 1.72e-10 | 39 |