FFCP PHASE2:Hg19::chr19:14228521..14228536,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5566 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9380 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9380 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P17612 | ||
|association_with_transcript=22bp_to_ENST00000308677,NM_002730,uc002myc.2_5end | |association_with_transcript=22bp_to_ENST00000308677,NM_002730,uc002myc.2_5end | ||
|cluster_id=chr19:14228521..14228536,- | |cluster_id=chr19:14228521..14228536,- |
Latest revision as of 03:49, 16 September 2015
Short description: | p2@PRKACA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKACA_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 22bp_to_ENST00000308677, NM_002730, uc002myc.2_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | P17612 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PRKACA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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defensive cell | 3.63e-13 | 48 |
phagocyte | 3.63e-13 | 48 |
classical monocyte | 1.55e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-12 | 42 |
myeloid leukocyte | 4.42e-10 | 72 |
macrophage dendritic cell progenitor | 1.56e-09 | 61 |
monopoietic cell | 5.57e-09 | 59 |
monocyte | 5.57e-09 | 59 |
monoblast | 5.57e-09 | 59 |
promonocyte | 5.57e-09 | 59 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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lateral plate mesoderm | 1.03e-17 | 203 |
developing anatomical structure | 1.18e-17 | 581 |
germ layer | 1.61e-17 | 560 |
germ layer / neural crest | 1.61e-17 | 560 |
embryonic tissue | 1.61e-17 | 560 |
presumptive structure | 1.61e-17 | 560 |
germ layer / neural crest derived structure | 1.61e-17 | 560 |
epiblast (generic) | 1.61e-17 | 560 |
embryonic structure | 1.79e-17 | 564 |
embryo | 2.76e-17 | 592 |
Showing 1 to 10 of 68 entries