FFCP PHASE1:Hg19::chr6:151187615..151187677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25902 | |EntrezGene=25902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21055 | |HGNC=21055 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JYA8 | |UniProt=Q5JYA8 | ||
|association_with_transcript=0bp_to_ENST00000441122,uc010kil.1_5end | |association_with_transcript=0bp_to_ENST00000441122,uc010kil.1_5end | ||
|cluster_id=chr6:151187615..151187677,+ | |||
|description=CAGE_peak_2_at_MTHFD1L_5end | |description=CAGE_peak_2_at_MTHFD1L_5end | ||
|id=chr6:151187615..151187677,+ | |id=chr6:151187615..151187677,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.31e-32!180;CL:0000222!4.64e-24!119;CL:0000220!7.89e-18!246;CL:0002321!1.42e-17!248;CL:0000183!2.05e-17!59;CL:0000187!3.31e-16!54;CL:0000192!5.32e-16!42;CL:0000514!5.32e-16!42;CL:0000359!6.33e-16!32;CL:0000680!2.38e-15!57;CL:0000056!2.38e-15!57;CL:0000355!2.38e-15!57;CL:0000393!4.84e-15!60;CL:0000211!4.84e-15!60;CL:0000057!1.29e-12!75;CL:0000548!1.51e-12!679;CL:0000004!1.51e-12!679;CL:0000255!1.51e-12!679;CL:0000012!4.83e-12!682;CL:0000144!1.64e-11!625;CL:0002371!8.64e-10!591;CL:0002139!8.72e-10!24;CL:0000213!1.58e-09!57;CL:0000215!1.58e-09!57;CL:0002078!5.21e-09!44;CL:0000115!7.28e-09!35;CL:0000071!2.22e-08!18;CL:0002546!2.22e-08!18;CL:0002494!3.10e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.31e-32!180;CL:0000222!4.64e-24!119;CL:0000220!7.89e-18!246;CL:0002321!1.42e-17!248;CL:0000183!2.05e-17!59;CL:0000187!3.31e-16!54;CL:0000192!5.32e-16!42;CL:0000514!5.32e-16!42;CL:0000359!6.33e-16!32;CL:0000680!2.38e-15!57;CL:0000056!2.38e-15!57;CL:0000355!2.38e-15!57;CL:0000393!4.84e-15!60;CL:0000211!4.84e-15!60;CL:0000057!1.29e-12!75;CL:0000548!1.51e-12!679;CL:0000004!1.51e-12!679;CL:0000255!1.51e-12!679;CL:0000012!4.83e-12!682;CL:0000144!1.64e-11!625;CL:0002371!8.64e-10!591;CL:0002139!8.72e-10!24;CL:0000213!1.58e-09!57;CL:0000215!1.58e-09!57;CL:0002078!5.21e-09!44;CL:0000115!7.28e-09!35;CL:0000071!2.22e-08!18;CL:0002546!2.22e-08!18;CL:0002494!3.10e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.55e-17;32!CL:0000192;2.91e-13;43!CL:0002139;3.13e-11;24!CL:0000071;1.60e-09;18!CL:0000187;2.43e-09;55!CL:0000115;4.72e-09;36!CL:0002494;1.73e-08;16!CL:0000393;6.59e-08;61!CL:0000211;6.59e-08;61!CL:0002078;2.33e-07;45!CL:0000213;4.39e-07;58!CL:0000215;4.39e-07;58!CL:0002334;8.67e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.07e-27,121;CL:0000192,3.28e-18,43;CL:0000514,3.28e-18,43;CL:0000359,4.89e-18,32;CL:0000187,6.89e-18,55;CL:0000680,9.65e-17,58;CL:0000056,9.65e-17,58;CL:0000355,9.65e-17,58;CL:0000393,9.85e-17,61;CL:0000211,9.85e-17,61;CL:0002321,2.55e-16,250;CL:0000057,6.62e-14,76;CL:0002139,5.39e-11,24;CL:0000213,1.21e-10,58;CL:0000215,1.21e-10,58;CL:0000115,1.26e-10,36;CL:0002078,1.61e-10,45;CL:0000071,2.20e-09,18;CL:0002546,2.20e-09,18;CL:0002494,1.89e-08,16;CL:0002334,8.88e-07,12;CL:0002539,9.63e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.91e-13;43!CL:0002546;1.60e-09;18!CL:0000355;1.20e-08;58!CL:0000222;8.23e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!4.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.26e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.93e-28!79;UBERON:0007798!2.93e-28!79;UBERON:0004872!1.56e-26!84;UBERON:0000055!3.70e-26!69;UBERON:0001981!6.69e-25!60;UBERON:0007500!6.69e-25!60;UBERON:0004537!6.69e-25!60;UBERON:0006965!6.69e-25!60;UBERON:0001637!1.02e-21!42;UBERON:0003509!1.02e-21!42;UBERON:0004572!1.02e-21!42;UBERON:0004535!2.31e-21!110;UBERON:0003914!7.62e-20!118;UBERON:0001009!1.36e-19!113;UBERON:0004573!2.55e-17!33;UBERON:0004571!2.55e-17!33;UBERON:0001134!1.73e-13!61;UBERON:0002036!1.73e-13!61;UBERON:0003082!1.73e-13!61;UBERON:0000914!7.53e-13!83;UBERON:0002329!7.53e-13!83;UBERON:0003077!7.53e-13!83;UBERON:0003059!7.53e-13!83;UBERON:0007282!7.53e-13!83;UBERON:0009618!7.53e-13!83;UBERON:0007285!7.53e-13!83;UBERON:0002385!1.73e-12!63;UBERON:0001015!1.73e-12!63;UBERON:0000383!1.73e-12!63;UBERON:0000490!2.91e-12!138;UBERON:0004290!3.58e-12!70;UBERON:0000486!2.52e-11!82;UBERON:0000477!7.07e-11!286;UBERON:0000947!1.10e-10!21;UBERON:0010191!1.10e-10!21;UBERON:0005256!1.70e-09!143;UBERON:0000119!1.82e-09!312;UBERON:0006914!2.15e-09!25;UBERON:0000483!2.15e-09!309;UBERON:0000025!3.36e-09!194;UBERON:0004111!9.63e-09!241;UBERON:0000487!1.41e-08!22;UBERON:0001986!2.22e-08!18;UBERON:0004638!2.22e-08!18;UBERON:0004852!2.22e-08!18;UBERON:0002100!2.42e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.76e-18;42!UBERON:0003509;7.76e-18;42!UBERON:0004572;7.76e-18;42!UBERON:0004573;9.55e-18;33!UBERON:0004571;9.55e-18;33!UBERON:0007500;9.12e-16;56!UBERON:0001981;9.12e-16;56!UBERON:0004537;9.12e-16;56!UBERON:0000055;1.06e-14;65!UBERON:0002049;2.79e-13;75!UBERON:0007798;2.79e-13;75!UBERON:0000947;5.26e-12;21!UBERON:0010191;5.26e-12;21!UBERON:0003914;3.76e-11;74!UBERON:0006914;6.64e-10;25!UBERON:0004638;1.60e-09;18!UBERON:0001986;1.60e-09;18!UBERON:0004852;1.60e-09;18!UBERON:0000487;2.19e-09;22!UBERON:0004535;8.59e-08;109!UBERON:0001009;4.21e-07;112!UBERON:0000490;5.62e-07;33 | |||
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| ||
|short_description=p2@MTHFD1L | |short_description=p2@MTHFD1L | ||
}} | }} |
Latest revision as of 04:22, 16 September 2015
Short description: | p2@MTHFD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTHFD1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441122, uc010kil.1_5end |
EntrezGene: | MTHFD1L |
HGNC: | 21055 |
UniProt: | Q5JYA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.07e-27 | 121 |
smooth muscle cell | 3.28e-18 | 43 |
smooth muscle myoblast | 3.28e-18 | 43 |
vascular associated smooth muscle cell | 4.89e-18 | 32 |
muscle cell | 6.89e-18 | 55 |
muscle precursor cell | 9.65e-17 | 58 |
myoblast | 9.65e-17 | 58 |
multi-potent skeletal muscle stem cell | 9.65e-17 | 58 |
electrically responsive cell | 9.85e-17 | 61 |
electrically active cell | 9.85e-17 | 61 |
embryonic cell | 2.55e-16 | 250 |
fibroblast | 6.62e-14 | 76 |
endothelial cell of vascular tree | 5.39e-11 | 24 |
lining cell | 1.21e-10 | 58 |
barrier cell | 1.21e-10 | 58 |
endothelial cell | 1.26e-10 | 36 |
meso-epithelial cell | 1.61e-10 | 45 |
blood vessel endothelial cell | 2.20e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.20e-09 | 18 |
cardiocyte | 1.89e-08 | 16 |
preadipocyte | 8.88e-07 | 12 |
aortic smooth muscle cell | 9.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.26e-08 | 14 |