FFCP PHASE1:Hg19::chr6:152506537..152506551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536990_5end | |association_with_transcript=0bp_to_ENST00000536990_5end | ||
|cluster_id=chr6:152506537..152506551,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_13_at_SYNE1_5end | |description=CAGE_peak_13_at_SYNE1_5end | ||
|id=chr6:152506537..152506551,- | |id=chr6:152506537..152506551,- | ||
|ontology_enrichment_celltype=CL:0000838!9.07e-48!52;CL:0000542!1.34e-46!53;CL:0000051!1.34e-46!53;CL:0000791!2.13e-31!18;CL:0000789!2.13e-31!18;CL:0002420!2.13e-31!18;CL:0002419!2.13e-31!18;CL:0000790!2.13e-31!18;CL:0002087!3.52e-31!119;CL:0000738!1.27e-28!140;CL:0000084!5.71e-28!25;CL:0000827!5.71e-28!25;CL:0002031!3.48e-25!124;CL:0000236!3.24e-22!14;CL:0000037!5.32e-20!172;CL:0000566!5.32e-20!172;CL:0000625!5.49e-20!11;CL:0002032!1.60e-18!165;CL:0000837!1.60e-18!165;CL:0000988!5.86e-18!182;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000624!1.20e-11!6;CL:0000898!9.25e-07!3 | |ontology_enrichment_celltype=CL:0000838!9.07e-48!52;CL:0000542!1.34e-46!53;CL:0000051!1.34e-46!53;CL:0000791!2.13e-31!18;CL:0000789!2.13e-31!18;CL:0002420!2.13e-31!18;CL:0002419!2.13e-31!18;CL:0000790!2.13e-31!18;CL:0002087!3.52e-31!119;CL:0000738!1.27e-28!140;CL:0000084!5.71e-28!25;CL:0000827!5.71e-28!25;CL:0002031!3.48e-25!124;CL:0000236!3.24e-22!14;CL:0000037!5.32e-20!172;CL:0000566!5.32e-20!172;CL:0000625!5.49e-20!11;CL:0002032!1.60e-18!165;CL:0000837!1.60e-18!165;CL:0000988!5.86e-18!182;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000624!1.20e-11!6;CL:0000898!9.25e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.14e-52;18!CL:0000789;8.14e-52;18!CL:0002419;8.14e-52;18!CL:0000084;8.03e-40;25!CL:0000625;1.42e-32;11!CL:0000542;1.69e-32;53!CL:0000236;3.17e-25;13!CL:0000624;1.63e-18;6!CL:0000945;1.57e-12;24!CL:0000898;2.70e-10;3!CL:0000623;1.05e-09;3!CL:0000226;2.92e-09;3!CL:0000842;2.92e-09;3!CL:0002087;6.76e-09;104!CL:0000815;2.31e-07;2!CL:0000792;2.31e-07;2!CL:0002677;2.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.21e-55,52;CL:0000542,8.53e-54,53;CL:0000051,8.53e-54,53;CL:0000791,6.94e-52,18;CL:0000789,6.94e-52,18;CL:0002420,6.94e-52,18;CL:0002419,6.94e-52,18;CL:0000790,6.94e-52,18;CL:0000084,8.24e-40,25;CL:0000827,8.24e-40,25;CL:0000625,1.38e-32,11;CL:0002087,2.42e-27,115;CL:0000236,2.58e-23,14;CL:0000738,4.90e-23,136;CL:0002031,3.68e-21,120;CL:0000624,1.63e-18,6;CL:0000037,9.20e-17,168;CL:0000988,2.05e-15,177;CL:0002032,1.51e-14,161;CL:0000837,1.51e-14,161;CL:0000945,1.43e-12,24;CL:0000826,1.43e-12,24;CL:0000898,2.58e-10,3;CL:0000623,8.93e-10,3;CL:0000825,8.93e-10,3;CL:0000226,3.33e-09,3;CL:0000842,3.33e-09,3;CL:0000815,2.35e-07,2;CL:0000792,2.35e-07,2;CL:0002677,2.35e-07,2;CL:0000893,6.38e-07,2;CL:0002489,6.38e-07,2;CL:0000809,6.38e-07,2;CL:0000808,6.38e-07,2;CL:0000894,6.38e-07,2;CL:0000806,6.38e-07,2;CL:0000807,6.38e-07,2;CL:0000805,6.38e-07,2;CL:0002425,6.38e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.14e-52;18!CL:0000051;1.69e-32;53!CL:0002425;7.73e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.99e-12!15;UBERON:0000179!3.99e-12!15;UBERON:0000463!3.99e-12!15;UBERON:0007023!5.41e-10!115;UBERON:0004177!2.14e-08!7;UBERON:0002370!2.40e-07!4;UBERON:0005058!2.40e-07!4;UBERON:0009113!2.40e-07!4;UBERON:0003295!2.40e-07!4;UBERON:0005562!2.40e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!3.99e-12!15;UBERON:0000179!3.99e-12!15;UBERON:0000463!3.99e-12!15;UBERON:0007023!5.41e-10!115;UBERON:0004177!2.14e-08!7;UBERON:0002370!2.40e-07!4;UBERON:0005058!2.40e-07!4;UBERON:0009113!2.40e-07!4;UBERON:0003295!2.40e-07!4;UBERON:0005562!2.40e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.99e-17;15!UBERON:0000179;5.99e-17;15!UBERON:0000463;5.99e-17;15!UBERON:0002390;4.94e-09;32!UBERON:0002193;5.27e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.22e-17,15;UBERON:0000179,6.22e-17,15;UBERON:0000463,6.22e-17,15;UBERON:0002370,5.57e-07,4;UBERON:0005058,5.57e-07,4;UBERON:0009113,5.57e-07,4;UBERON:0003295,5.57e-07,4;UBERON:0005562,5.57e-07,4 | |||
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| ||
|short_description=p13@SYNE1 | |short_description=p13@SYNE1 | ||
}} | }} |
Latest revision as of 06:19, 16 September 2015
Short description: | p13@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SYNE1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000536990_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 6.22e-17 | 15 |
haemolymphatic fluid | 6.22e-17 | 15 |
organism substance | 6.22e-17 | 15 |
thymus | 5.57e-07 | 4 |
hemolymphoid system gland | 5.57e-07 | 4 |
thymic region | 5.57e-07 | 4 |
pharyngeal gland | 5.57e-07 | 4 |
thymus primordium | 5.57e-07 | 4 |