FFCP PHASE1:Hg19::chr6:152506537..152506551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536990_5end | |||
|cluster_id=chr6:152506537..152506551,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_13_at_SYNE1_5end | |||
|id=chr6:152506537..152506551,- | |||
|ontology_enrichment_celltype=CL:0000838!9.07e-48!52;CL:0000542!1.34e-46!53;CL:0000051!1.34e-46!53;CL:0000791!2.13e-31!18;CL:0000789!2.13e-31!18;CL:0002420!2.13e-31!18;CL:0002419!2.13e-31!18;CL:0000790!2.13e-31!18;CL:0002087!3.52e-31!119;CL:0000738!1.27e-28!140;CL:0000084!5.71e-28!25;CL:0000827!5.71e-28!25;CL:0002031!3.48e-25!124;CL:0000236!3.24e-22!14;CL:0000037!5.32e-20!172;CL:0000566!5.32e-20!172;CL:0000625!5.49e-20!11;CL:0002032!1.60e-18!165;CL:0000837!1.60e-18!165;CL:0000988!5.86e-18!182;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000624!1.20e-11!6;CL:0000898!9.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.14e-52;18!CL:0000789;8.14e-52;18!CL:0002419;8.14e-52;18!CL:0000084;8.03e-40;25!CL:0000625;1.42e-32;11!CL:0000542;1.69e-32;53!CL:0000236;3.17e-25;13!CL:0000624;1.63e-18;6!CL:0000945;1.57e-12;24!CL:0000898;2.70e-10;3!CL:0000623;1.05e-09;3!CL:0000226;2.92e-09;3!CL:0000842;2.92e-09;3!CL:0002087;6.76e-09;104!CL:0000815;2.31e-07;2!CL:0000792;2.31e-07;2!CL:0002677;2.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.21e-55,52;CL:0000542,8.53e-54,53;CL:0000051,8.53e-54,53;CL:0000791,6.94e-52,18;CL:0000789,6.94e-52,18;CL:0002420,6.94e-52,18;CL:0002419,6.94e-52,18;CL:0000790,6.94e-52,18;CL:0000084,8.24e-40,25;CL:0000827,8.24e-40,25;CL:0000625,1.38e-32,11;CL:0002087,2.42e-27,115;CL:0000236,2.58e-23,14;CL:0000738,4.90e-23,136;CL:0002031,3.68e-21,120;CL:0000624,1.63e-18,6;CL:0000037,9.20e-17,168;CL:0000988,2.05e-15,177;CL:0002032,1.51e-14,161;CL:0000837,1.51e-14,161;CL:0000945,1.43e-12,24;CL:0000826,1.43e-12,24;CL:0000898,2.58e-10,3;CL:0000623,8.93e-10,3;CL:0000825,8.93e-10,3;CL:0000226,3.33e-09,3;CL:0000842,3.33e-09,3;CL:0000815,2.35e-07,2;CL:0000792,2.35e-07,2;CL:0002677,2.35e-07,2;CL:0000893,6.38e-07,2;CL:0002489,6.38e-07,2;CL:0000809,6.38e-07,2;CL:0000808,6.38e-07,2;CL:0000894,6.38e-07,2;CL:0000806,6.38e-07,2;CL:0000807,6.38e-07,2;CL:0000805,6.38e-07,2;CL:0002425,6.38e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.14e-52;18!CL:0000051;1.69e-32;53!CL:0002425;7.73e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.99e-12!15;UBERON:0000179!3.99e-12!15;UBERON:0000463!3.99e-12!15;UBERON:0007023!5.41e-10!115;UBERON:0004177!2.14e-08!7;UBERON:0002370!2.40e-07!4;UBERON:0005058!2.40e-07!4;UBERON:0009113!2.40e-07!4;UBERON:0003295!2.40e-07!4;UBERON:0005562!2.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.99e-17;15!UBERON:0000179;5.99e-17;15!UBERON:0000463;5.99e-17;15!UBERON:0002390;4.94e-09;32!UBERON:0002193;5.27e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.22e-17,15;UBERON:0000179,6.22e-17,15;UBERON:0000463,6.22e-17,15;UBERON:0002370,5.57e-07,4;UBERON:0005058,5.57e-07,4;UBERON:0009113,5.57e-07,4;UBERON:0003295,5.57e-07,4;UBERON:0005562,5.57e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,3.45446458287491,0.154816123316076,0,0,0,0.387336002901508,0.426507697462265,0,1.66198622559563,0.802177789880567,1.30206522429511,0.223915474239924,0.971680998056939,0.77272670290256,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,5.46138611262132,4.44754626931777,1.28019066769952,4.80475184443215,6.32227683949932,5.94940385506376,5.72432252721218,3.41527781465669,5.28513470433845,3.44045905312706,0,0,0,6.88484195398416,5.10913991573914,4.5232329779892,4.51403537554831,5.54067853277104,9.46895611469466,3.89653456815823,4.34500781852177,7.07054177939609,2.87994062958707,5.41607727530031,1.92136979588513,3.12142434143708,4.1109476150919,4.69795030235942,3.18783394308558,8.30404753707538,8.02622484269139,7.31748666634838,6.00539516297101,7.66440987203842,9.62156847351364,10.8798467568386,11.4683549156675,7.1619179924206,10.4549724889321,2.25862678616659,2.8157054453972,7.49584359314075,13.0227488624209,9.85353596305256,4.83856183739358,6.41856469880418,5.21367853978076,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,5.71389204585589,4.9594342217689,4.36366323351144,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,3.23571301227925,4.05564719653088,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,2.84823593587081,5.00286728461357,3.29089818468955,0,1.62009431171434,3.96562588147135,0,0,0,0,0.577076851905779,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0.729819156862664,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.320362237703084,0,0,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.69171052363736,0.644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.48554492622814,0.744896571550295,0,0.0636471582781649,0,0,0,3.03084238565644,0.215166616178029,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p13@SYNE1 | |||
}} | }} |
Latest revision as of 06:19, 16 September 2015
Short description: | p13@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SYNE1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000536990_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 6.22e-17 | 15 |
haemolymphatic fluid | 6.22e-17 | 15 |
organism substance | 6.22e-17 | 15 |
thymus | 5.57e-07 | 4 |
hemolymphoid system gland | 5.57e-07 | 4 |
thymic region | 5.57e-07 | 4 |
pharyngeal gland | 5.57e-07 | 4 |
thymus primordium | 5.57e-07 | 4 |