FFCP PHASE1:Hg19::chr2:109335896..109335907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5903 | |EntrezGene=5903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9848 | |HGNC=9848 | ||
|TSSclassifier=strong | |||
|UniProt=P49792,E9PGT0 | |UniProt=P49792,E9PGT0 | ||
|association_with_transcript=-29bp_to_ENST00000283195,ENST00000409491,NM_006267,uc002tem.3_5end | |association_with_transcript=-29bp_to_ENST00000283195,ENST00000409491,NM_006267,uc002tem.3_5end | ||
|cluster_id=chr2:109335896..109335907,+ | |||
|description=CAGE_peak_2_at_RANBP2_5end | |description=CAGE_peak_2_at_RANBP2_5end | ||
|id=chr2:109335896..109335907,+ | |id=chr2:109335896..109335907,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.79e-24!115;UBERON:0001049!4.92e-08!57;UBERON:0005068!4.92e-08!57;UBERON:0006241!4.92e-08!57;UBERON:0007135!4.92e-08!57;UBERON:0001017!7.69e-08!82;UBERON:0005743!3.46e-07!86;UBERON:0000955!3.92e-07!69;UBERON:0006238!3.92e-07!69;UBERON:0002616!4.89e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.14e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.68e-28,114;UBERON:0001049,2.45e-09,56;UBERON:0005068,2.45e-09,56;UBERON:0006241,2.45e-09,56;UBERON:0007135,2.45e-09,56;UBERON:0000073,2.19e-08,53;UBERON:0002616,2.19e-08,53;UBERON:0001017,5.32e-08,81;UBERON:0003075,8.64e-08,82;UBERON:0007284,8.64e-08,82;UBERON:0000955,1.27e-07,68;UBERON:0006238,1.27e-07,68;UBERON:0002346,2.55e-07,86;UBERON:0002780,3.51e-07,41;UBERON:0001890,3.51e-07,41;UBERON:0003080,3.51e-07,41;UBERON:0006240,3.51e-07,41 | |||
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| ||
|short_description=p2@RANBP2 | |short_description=p2@RANBP2 | ||
}} | }} |
Latest revision as of 06:47, 16 September 2015
Short description: | p2@RANBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RANBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000283195, ENST00000409491, NM_006267, uc002tem.3_5end |
EntrezGene: | RANBP2 |
HGNC: | 9848 |
UniProt: | P49792E9PGT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.68e-28 | 114 |
neural tube | 2.45e-09 | 56 |
neural rod | 2.45e-09 | 56 |
future spinal cord | 2.45e-09 | 56 |
neural keel | 2.45e-09 | 56 |
regional part of nervous system | 2.19e-08 | 53 |
regional part of brain | 2.19e-08 | 53 |
central nervous system | 5.32e-08 | 81 |
neural plate | 8.64e-08 | 82 |
presumptive neural plate | 8.64e-08 | 82 |
brain | 1.27e-07 | 68 |
future brain | 1.27e-07 | 68 |
neurectoderm | 2.55e-07 | 86 |
regional part of forebrain | 3.51e-07 | 41 |
forebrain | 3.51e-07 | 41 |
anterior neural tube | 3.51e-07 | 41 |
future forebrain | 3.51e-07 | 41 |