FFCP PHASE1:Hg19::chr17:54991844..54991855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7706 | |EntrezGene=7706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12932 | |HGNC=12932 | ||
|TSSclassifier=strong | |||
|UniProt=Q14258 | |UniProt=Q14258 | ||
|association_with_transcript=-435bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | |association_with_transcript=-435bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | ||
|cluster_id=chr17:54991844..54991855,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_5_at_TRIM25_5end | |description=CAGE_peak_5_at_TRIM25_5end | ||
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|ontology_enrichment_celltype=CL:0002057!6.23e-67!42;CL:0000766!2.50e-62!76;CL:0000860!1.29e-61!45;CL:0000763!3.47e-54!112;CL:0000049!3.47e-54!112;CL:0000557!1.70e-53!71;CL:0002009!4.36e-52!65;CL:0000839!7.96e-52!70;CL:0002194!2.09e-51!63;CL:0000576!2.09e-51!63;CL:0000040!2.09e-51!63;CL:0000559!2.09e-51!63;CL:0000037!5.27e-37!172;CL:0000566!5.27e-37!172;CL:0000738!1.41e-36!140;CL:0002032!1.90e-36!165;CL:0000837!1.90e-36!165;CL:0000988!6.09e-34!182;CL:0002031!5.67e-30!124;CL:0002087!1.50e-27!119;CL:0000134!2.63e-11!358;CL:0002320!9.47e-11!365;CL:0000094!1.91e-09!8;CL:0000219!8.17e-09!390;CL:0000034!4.22e-08!444;CL:0000048!5.99e-08!430;CL:0000775!7.77e-08!3;CL:0000723!1.34e-07!436 | |ontology_enrichment_celltype=CL:0002057!6.23e-67!42;CL:0000766!2.50e-62!76;CL:0000860!1.29e-61!45;CL:0000763!3.47e-54!112;CL:0000049!3.47e-54!112;CL:0000557!1.70e-53!71;CL:0002009!4.36e-52!65;CL:0000839!7.96e-52!70;CL:0002194!2.09e-51!63;CL:0000576!2.09e-51!63;CL:0000040!2.09e-51!63;CL:0000559!2.09e-51!63;CL:0000037!5.27e-37!172;CL:0000566!5.27e-37!172;CL:0000738!1.41e-36!140;CL:0002032!1.90e-36!165;CL:0000837!1.90e-36!165;CL:0000988!6.09e-34!182;CL:0002031!5.67e-30!124;CL:0002087!1.50e-27!119;CL:0000134!2.63e-11!358;CL:0002320!9.47e-11!365;CL:0000094!1.91e-09!8;CL:0000219!8.17e-09!390;CL:0000034!4.22e-08!444;CL:0000048!5.99e-08!430;CL:0000775!7.77e-08!3;CL:0000723!1.34e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-101;33!CL:0002057;1.16e-101;33!CL:0000473;4.82e-70;39!CL:0000234;4.82e-70;39!CL:0000576;5.10e-57;48!CL:0000766;1.58e-39;69!CL:0000763;1.13e-17;100!CL:0000775;4.55e-16;3!CL:0002087;2.44e-14;104!CL:0000738;5.59e-12;136!CL:0000094;2.03e-10;8!CL:0002393;1.19e-07;6!CL:0002397;1.19e-07;6!CL:0000081;1.37e-07;11!CL:0000988;8.05e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;1.16e-101;33!CL:0002057;1.16e-101;33!CL:0000473;4.82e-70;39!CL:0000234;4.82e-70;39!CL:0000576;5.10e-57;48!CL:0000766;1.58e-39;69!CL:0000763;1.13e-17;100!CL:0000775;4.55e-16;3!CL:0002087;2.44e-14;104!CL:0000738;5.59e-12;136!CL:0000094;2.03e-10;8!CL:0002393;1.19e-07;6!CL:0002397;1.19e-07;6!CL:0000081;1.37e-07;11!CL:0000988;8.05e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.41e-107,42;CL:0002057,2.41e-107,42;CL:0000473,4.10e-93,48;CL:0000234,4.10e-93,48;CL:0000766,6.07e-77,72;CL:0002009,2.38e-75,61;CL:0002194,3.49e-73,59;CL:0000576,3.49e-73,59;CL:0000040,3.49e-73,59;CL:0000559,3.49e-73,59;CL:0000557,4.11e-68,67;CL:0000839,7.49e-65,66;CL:0000763,2.84e-52,108;CL:0000049,2.84e-52,108;CL:0000738,3.92e-40,136;CL:0002031,2.50e-35,120;CL:0002087,1.16e-34,115;CL:0002032,7.83e-33,161;CL:0000837,7.83e-33,161;CL:0000037,3.57e-31,168;CL:0000988,3.11e-29,177;CL:0000775,2.97e-16,3;CL:0000134,5.31e-11,354;CL:0002320,1.21e-10,361;CL:0000094,1.64e-10,8;CL:0000219,2.17e-09,386;CL:0000048,7.46e-08,427;CL:0000081,1.17e-07,11;CL:0000723,1.22e-07,433;CL:0000034,2.28e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.83e-81;42!CL:0000049;6.33e-15;108 | |ontology_enrichment_development_v019=CL:0002057;6.83e-81;42!CL:0000049;6.33e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.70e-54!102;UBERON:0003061!5.70e-54!102;UBERON:0002193!1.21e-47!112;UBERON:0002371!6.79e-46!80;UBERON:0001474!1.46e-43!86;UBERON:0004765!5.75e-35!101;UBERON:0001434!5.75e-35!101;UBERON:0002405!3.06e-33!115;UBERON:0003081!2.69e-21!216;UBERON:0002204!1.43e-18!167;UBERON:0002384!5.38e-10!375;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!5.70e-54!102;UBERON:0003061!5.70e-54!102;UBERON:0002193!1.21e-47!112;UBERON:0002371!6.79e-46!80;UBERON:0001474!1.46e-43!86;UBERON:0004765!5.75e-35!101;UBERON:0001434!5.75e-35!101;UBERON:0002405!3.06e-33!115;UBERON:0003081!2.69e-21!216;UBERON:0002204!1.43e-18!167;UBERON:0002384!5.38e-10!375;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-07;15!UBERON:0000179;1.06e-07;15!UBERON:0000463;1.06e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-07;15!UBERON:0000179;1.06e-07;15!UBERON:0000463;1.06e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.09e-61,98;UBERON:0003061,6.09e-61,98;UBERON:0002371,2.28e-59,76;UBERON:0002193,1.07e-54,108;UBERON:0001474,1.36e-54,82;UBERON:0004765,3.34e-49,90;UBERON:0002405,2.04e-47,93;UBERON:0001434,1.16e-43,100;UBERON:0003081,7.34e-26,203;UBERON:0002204,1.53e-23,167;UBERON:0000926,4.45e-14,315;UBERON:0004120,4.45e-14,315;UBERON:0006603,4.45e-14,315;UBERON:0002384,3.70e-10,371;UBERON:0000178,1.45e-07,15;UBERON:0000179,1.45e-07,15;UBERON:0000463,1.45e-07,15 | |||
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|short_description=p5@TRIM25 | |short_description=p5@TRIM25 | ||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p5@TRIM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM25_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -435bp_to_ENST00000316881, NM_005082, uc002iut.2, uc010dcj.2_5end |
EntrezGene: | TRIM25 |
HGNC: | 12932 |
UniProt: | Q14258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.41e-107 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.41e-107 | 42 |
defensive cell | 4.10e-93 | 48 |
phagocyte | 4.10e-93 | 48 |
myeloid leukocyte | 6.07e-77 | 72 |
macrophage dendritic cell progenitor | 2.38e-75 | 61 |
monopoietic cell | 3.49e-73 | 59 |
monocyte | 3.49e-73 | 59 |
monoblast | 3.49e-73 | 59 |
promonocyte | 3.49e-73 | 59 |
granulocyte monocyte progenitor cell | 4.11e-68 | 67 |
myeloid lineage restricted progenitor cell | 7.49e-65 | 66 |
myeloid cell | 2.84e-52 | 108 |
common myeloid progenitor | 2.84e-52 | 108 |
leukocyte | 3.92e-40 | 136 |
hematopoietic lineage restricted progenitor cell | 2.50e-35 | 120 |
nongranular leukocyte | 1.16e-34 | 115 |
hematopoietic oligopotent progenitor cell | 7.83e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.83e-33 | 161 |
hematopoietic stem cell | 3.57e-31 | 168 |
hematopoietic cell | 3.11e-29 | 177 |
neutrophil | 2.97e-16 | 3 |
mesenchymal cell | 5.31e-11 | 354 |
connective tissue cell | 1.21e-10 | 361 |
granulocyte | 1.64e-10 | 8 |
motile cell | 2.17e-09 | 386 |
multi fate stem cell | 7.46e-08 | 427 |
blood cell | 1.17e-07 | 11 |
somatic stem cell | 1.22e-07 | 433 |
stem cell | 2.28e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.09e-61 | 98 |
blood island | 6.09e-61 | 98 |
bone marrow | 2.28e-59 | 76 |
hemolymphoid system | 1.07e-54 | 108 |
bone element | 1.36e-54 | 82 |
skeletal element | 3.34e-49 | 90 |
immune system | 2.04e-47 | 93 |
skeletal system | 1.16e-43 | 100 |
lateral plate mesoderm | 7.34e-26 | 203 |
musculoskeletal system | 1.53e-23 | 167 |
mesoderm | 4.45e-14 | 315 |
mesoderm-derived structure | 4.45e-14 | 315 |
presumptive mesoderm | 4.45e-14 | 315 |
connective tissue | 3.70e-10 | 371 |
blood | 1.45e-07 | 15 |
haemolymphatic fluid | 1.45e-07 | 15 |
organism substance | 1.45e-07 | 15 |