FFCP PHASE1:Hg19::chr3:15839395..15839435,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:15839395..15839435,-
|short_description=p2@ANKRD28
|description=CAGE_peak_2_at_ANKRD28_5end
|association_with_transcript=50bp_to_ENST00000461696_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23243 | |EntrezGene=23243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29024 | |HGNC=29024 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000461696_5end | |||
|cluster_id=chr3:15839395..15839435,- | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_2_at_ANKRD28_5end | |||
|id=chr3:15839395..15839435,- | |||
|ontology_enrichment_celltype=CL:0002320!5.36e-22!365;CL:0000766!2.35e-21!76;CL:0000134!4.17e-21!358;CL:0000557!5.36e-21!71;CL:0000048!2.47e-20!430;CL:0000219!3.45e-19!390;CL:0000763!6.27e-19!112;CL:0000049!6.27e-19!112;CL:0000723!2.93e-18!436;CL:0000839!4.05e-18!70;CL:0000034!9.91e-18!444;CL:0002009!1.97e-17!65;CL:0002057!3.12e-17!42;CL:0002194!2.76e-16!63;CL:0000576!2.76e-16!63;CL:0000040!2.76e-16!63;CL:0000559!2.76e-16!63;CL:0000860!7.18e-15!45;CL:0002371!2.91e-08!591;CL:0000057!4.17e-07!75;CL:0002620!5.00e-07!23;CL:0000144!7.33e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-18;33!CL:0002057;1.77e-18;33!CL:0000473;7.50e-17;39!CL:0000234;7.50e-17;39!CL:0000576;9.56e-12;48!CL:0000766;9.60e-12;69!CL:0002620;2.28e-07;23!CL:0000763;4.24e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.07e-24,72;CL:0000557,6.13e-24,67;CL:0002320,2.35e-23,361;CL:0000134,1.53e-22,354;CL:0000048,6.10e-22,427;CL:0000219,8.36e-21,386;CL:0000839,2.85e-20,66;CL:0002009,4.64e-20,61;CL:0000723,4.73e-20,433;CL:0000034,8.46e-20,441;CL:0000763,9.59e-20,108;CL:0000049,9.59e-20,108;CL:0000473,1.56e-19,48;CL:0000234,1.56e-19,48;CL:0002194,8.29e-19,59;CL:0000576,8.29e-19,59;CL:0000040,8.29e-19,59;CL:0000559,8.29e-19,59;CL:0000860,9.15e-18,42;CL:0002057,9.15e-18,42;CL:0000057,1.55e-07,76;CL:0002620,2.91e-07,23;CL:0000738,3.45e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.47e-22!102;UBERON:0003061!3.47e-22!102;UBERON:0002384!2.19e-21!375;UBERON:0004765!2.32e-21!101;UBERON:0001434!2.32e-21!101;UBERON:0001474!4.73e-21!86;UBERON:0002371!6.17e-21!80;UBERON:0002193!1.15e-20!112;UBERON:0002204!6.39e-18!167;UBERON:0002405!3.08e-11!115;UBERON:0003081!4.48e-11!216;UBERON:0000926!5.78e-07!448;UBERON:0004120!5.78e-07!448;UBERON:0006603!5.78e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,5.31e-24,100;UBERON:0002390,6.07e-24,98;UBERON:0003061,6.07e-24,98;UBERON:0001474,1.02e-23,82;UBERON:0002371,1.07e-23,76;UBERON:0002384,8.96e-23,371;UBERON:0004765,1.65e-22,90;UBERON:0002193,4.69e-22,108;UBERON:0002204,1.95e-19,167;UBERON:0002405,9.40e-18,93;UBERON:0000926,8.31e-16,315;UBERON:0004120,8.31e-16,315;UBERON:0006603,8.31e-16,315;UBERON:0003081,1.77e-12,203 | |||
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| ||
|short_description=p2@ANKRD28 | |||
}} | }} |
Latest revision as of 08:50, 16 September 2015
Short description: | p2@ANKRD28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ANKRD28_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | 50bp_to_ENST00000461696_5end |
EntrezGene: | ANKRD28 |
HGNC: | 29024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.07e-24 | 72 |
granulocyte monocyte progenitor cell | 6.13e-24 | 67 |
connective tissue cell | 2.35e-23 | 361 |
mesenchymal cell | 1.53e-22 | 354 |
multi fate stem cell | 6.10e-22 | 427 |
motile cell | 8.36e-21 | 386 |
myeloid lineage restricted progenitor cell | 2.85e-20 | 66 |
macrophage dendritic cell progenitor | 4.64e-20 | 61 |
somatic stem cell | 4.73e-20 | 433 |
stem cell | 8.46e-20 | 441 |
myeloid cell | 9.59e-20 | 108 |
common myeloid progenitor | 9.59e-20 | 108 |
defensive cell | 1.56e-19 | 48 |
phagocyte | 1.56e-19 | 48 |
monopoietic cell | 8.29e-19 | 59 |
monocyte | 8.29e-19 | 59 |
monoblast | 8.29e-19 | 59 |
promonocyte | 8.29e-19 | 59 |
classical monocyte | 9.15e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.15e-18 | 42 |
fibroblast | 1.55e-07 | 76 |
skin fibroblast | 2.91e-07 | 23 |
leukocyte | 3.45e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 5.31e-24 | 100 |
hematopoietic system | 6.07e-24 | 98 |
blood island | 6.07e-24 | 98 |
bone element | 1.02e-23 | 82 |
bone marrow | 1.07e-23 | 76 |
connective tissue | 8.96e-23 | 371 |
skeletal element | 1.65e-22 | 90 |
hemolymphoid system | 4.69e-22 | 108 |
musculoskeletal system | 1.95e-19 | 167 |
immune system | 9.40e-18 | 93 |
mesoderm | 8.31e-16 | 315 |
mesoderm-derived structure | 8.31e-16 | 315 |
presumptive mesoderm | 8.31e-16 | 315 |
lateral plate mesoderm | 1.77e-12 | 203 |