FFCP PHASE1:Hg19::chr9:138391692..138391741,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:138391692..138391741,- to FFCP PHASE1:Hg19::chr9:138391692..138391741,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=138162 | |EntrezGene=138162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28435 | |HGNC=28435 | ||
|TSSclassifier=strong | |||
|UniProt=Q5BN46 | |UniProt=Q5BN46 | ||
|association_with_transcript=0bp_to_ENST00000429260_5end | |||
|cluster_id=chr9:138391692..138391741,- | |||
|description=CAGE_peak_1_at_C9orf116_5end | |||
|id=chr9:138391692..138391741,- | |||
|ontology_enrichment_celltype=CL:0002321!2.04e-14!248;CL:0000220!7.35e-14!246;CL:0000222!1.81e-11!119;CL:0000055!3.25e-11!180;CL:0000066!2.52e-10!254;CL:0000393!2.50e-08!60;CL:0000211!2.50e-08!60;CL:0000183!3.10e-07!59;CL:0002319!8.05e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.64e-14,250;CL:0000222,1.36e-11,121;CL:0000066,1.52e-09,253;CL:0000393,2.13e-08,61;CL:0000211,2.13e-08,61 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.71e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!5.35e-11!143;DOID:305!5.58e-11!106;DOID:14566!5.95e-10!239;DOID:162!6.97e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.92e-10,106;DOID:0050687,2.05e-10,143;DOID:14566,5.51e-09,239;DOID:162,5.78e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000483!2.38e-19!309;UBERON:0000119!3.79e-19!312;UBERON:0000481!6.23e-19!347;UBERON:0000025!1.33e-17!194;UBERON:0000475!5.83e-16!365;UBERON:0000477!2.02e-15!286;UBERON:0004111!2.39e-13!241;UBERON:0000073!5.55e-13!94;UBERON:0001016!5.55e-13!94;UBERON:0005743!1.11e-12!86;UBERON:0001017!1.48e-11!82;UBERON:0002346!8.07e-11!90;UBERON:0002100!4.12e-10!216;UBERON:0000922!8.67e-10!612;UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0000468!4.47e-09!659;UBERON:0003104!6.30e-09!238;UBERON:0009142!6.30e-09!238;UBERON:0000955!1.62e-08!69;UBERON:0006238!1.62e-08!69;UBERON:0003914!1.63e-08!118;UBERON:0002050!3.14e-08!605;UBERON:0005423!3.14e-08!605;UBERON:0003056!4.38e-08!61;UBERON:0000923!4.65e-08!604;UBERON:0005291!4.65e-08!604;UBERON:0006598!4.65e-08!604;UBERON:0002532!4.65e-08!604;UBERON:0001049!1.02e-07!57;UBERON:0005068!1.02e-07!57;UBERON:0006241!1.02e-07!57;UBERON:0007135!1.02e-07!57;UBERON:0000064!2.11e-07!219;UBERON:0005256!3.38e-07!143;UBERON:0009569!5.07e-07!113;UBERON:0002616!5.38e-07!59;UBERON:0000490!5.40e-07!138;UBERON:0000924!6.56e-07!173;UBERON:0006601!6.56e-07!173;UBERON:0005177!8.98e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,3.14e-18,306;UBERON:0000119,4.94e-18,309;UBERON:0000025,2.10e-17,192;UBERON:0004111,4.30e-13,240;UBERON:0001016,3.41e-12,89;UBERON:0001017,5.07e-12,81;UBERON:0011216,2.16e-11,223;UBERON:0010314,7.54e-11,132;UBERON:0002346,2.19e-10,86;UBERON:0002100,7.07e-10,199;UBERON:0003075,3.02e-09,82;UBERON:0007284,3.02e-09,82;UBERON:0000955,6.71e-09,68;UBERON:0006238,6.71e-09,68;UBERON:0003056,3.47e-08,61;UBERON:0000922,4.16e-08,592;UBERON:0001049,4.22e-08,56;UBERON:0005068,4.22e-08,56;UBERON:0006241,4.22e-08,56;UBERON:0007135,4.22e-08,56;UBERON:0003914,4.49e-08,117;UBERON:0000073,6.41e-08,53;UBERON:0002616,6.41e-08,53;UBERON:0003104,9.19e-08,160;UBERON:0009142,9.19e-08,160;UBERON:0000490,4.65e-07,148;UBERON:0009569,9.52e-07,112 | |||
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| ||
|short_description=p1@C9orf116 | |||
}} | }} |
Latest revision as of 10:16, 16 September 2015
Short description: | p1@C9orf116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf116_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000429260_5end |
EntrezGene: | C9orf116 |
HGNC: | 28435 |
UniProt: | Q5BN46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.64e-14 | 250 |
mesodermal cell | 1.36e-11 | 121 |
epithelial cell | 1.52e-09 | 253 |
electrically responsive cell | 2.13e-08 | 61 |
electrically active cell | 2.13e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelium | 3.14e-18 | 306 |
cell layer | 4.94e-18 | 309 |
tube | 2.10e-17 | 192 |
anatomical conduit | 4.30e-13 | 240 |
nervous system | 3.41e-12 | 89 |
central nervous system | 5.07e-12 | 81 |
organ system subdivision | 2.16e-11 | 223 |
structure with developmental contribution from neural crest | 7.54e-11 | 132 |
neurectoderm | 2.19e-10 | 86 |
trunk | 7.07e-10 | 199 |
neural plate | 3.02e-09 | 82 |
presumptive neural plate | 3.02e-09 | 82 |
brain | 6.71e-09 | 68 |
future brain | 6.71e-09 | 68 |
pre-chordal neural plate | 3.47e-08 | 61 |
embryo | 4.16e-08 | 592 |
neural tube | 4.22e-08 | 56 |
neural rod | 4.22e-08 | 56 |
future spinal cord | 4.22e-08 | 56 |
neural keel | 4.22e-08 | 56 |
epithelial tube | 4.49e-08 | 117 |
regional part of nervous system | 6.41e-08 | 53 |
regional part of brain | 6.41e-08 | 53 |
mesenchyme | 9.19e-08 | 160 |
entire embryonic mesenchyme | 9.19e-08 | 160 |
unilaminar epithelium | 4.65e-07 | 148 |
subdivision of trunk | 9.52e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.92e-10 | 106 |
cell type cancer | 2.05e-10 | 143 |
disease of cellular proliferation | 5.51e-09 | 239 |
cancer | 5.78e-08 | 235 |