FFCP PHASE1:Hg19::chr14:89290965..89291047,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:89290965..89291047,+
|short_description=p1@TTC8
|description=CAGE_peak_1_at_TTC8_5end
|association_with_transcript=0bp_to_ENST00000338104,ENST00000345383,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123016 | |EntrezGene=123016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20087 | |HGNC=20087 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAM2,B3KSL8,G3V2Z9,G3V324,Q86U25 | |UniProt=Q8TAM2,B3KSL8,G3V2Z9,G3V324,Q86U25 | ||
|association_with_transcript=0bp_to_ENST00000338104,ENST00000345383,ENST00000346301,ENST00000354441,ENST00000380656,ENST00000536576,ENST00000555057,ENST00000556567,ENST00000556651,NM_144596,NM_198309,NM_198310_5end | |||
|cluster_id=chr14:89290965..89291047,+ | |||
|description=CAGE_peak_1_at_TTC8_5end | |||
|id=chr14:89290965..89291047,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.41e-13!180;CL:0000057!2.09e-11!75;CL:0002620!2.34e-07!23;CL:0000499!3.12e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.33e-07;23!CL:0000499;2.46e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.35e-11,76;CL:0000499,2.07e-07,28;CL:0002620,2.34e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!5.13e-08!27;DOID:193!9.42e-08!29;DOID:2394!5.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;5.62e-08;27!DOID:193;1.01e-07;29!DOID:2394;5.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,5.13e-08,27;DOID:193,9.42e-08,29;DOID:2394,5.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.51e-18!365;UBERON:0000481!8.27e-11!347;UBERON:0000468!1.48e-10!659;UBERON:0000924!7.91e-10!173;UBERON:0006601!7.91e-10!173;UBERON:0004121!8.22e-10!169;UBERON:0000033!1.73e-09!123;UBERON:0000062!4.37e-09!511;UBERON:0000153!3.77e-08!129;UBERON:0007811!3.77e-08!129;UBERON:0000467!5.94e-08!625;UBERON:0000480!9.10e-08!626;UBERON:0003102!1.40e-07!95;UBERON:0005156!2.96e-07!59;UBERON:0000990!2.96e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.31e-10,171;UBERON:0000924,3.31e-10,171;UBERON:0006601,3.31e-10,171;UBERON:0003102,1.50e-08,99;UBERON:0010314,4.42e-08,132;UBERON:0011216,1.37e-07,223;UBERON:0005156,2.96e-07,59;UBERON:0000990,2.96e-07,59 | |||
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| ||
|short_description=p1@TTC8 | |||
}} | }} |
Latest revision as of 11:03, 16 September 2015
Short description: | p1@TTC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338104, ENST00000345383, ENST00000346301, ENST00000354441, ENST00000380656, ENST00000536576, ENST00000555057, ENST00000556567, ENST00000556651, NM_144596, NM_198309, NM_198310_5end |
EntrezGene: | TTC8 |
HGNC: | 20087 |
UniProt: | Q8TAM2B3KSL8G3V2Z9G3V324Q86U25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.35e-11 | 76 |
stromal cell | 2.07e-07 | 28 |
skin fibroblast | 2.34e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.31e-10 | 171 |
ectoderm | 3.31e-10 | 171 |
presumptive ectoderm | 3.31e-10 | 171 |
surface structure | 1.50e-08 | 99 |
structure with developmental contribution from neural crest | 4.42e-08 | 132 |
organ system subdivision | 1.37e-07 | 223 |
reproductive structure | 2.96e-07 | 59 |
reproductive system | 2.96e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 5.13e-08 | 27 |
reproductive organ cancer | 9.42e-08 | 29 |
ovarian cancer | 5.11e-07 | 14 |