FFCP PHASE1:Hg19::chr10:115439282..115439286,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:115439282..115439286,+
|short_description=p5@CASP7
|description=CAGE_peak_5_at_CASP7_5end
|association_with_transcript=-139bp_to_ENST00000369321,NM_001227...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=840 | |EntrezGene=840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1508 | |HGNC=1508 | ||
|TSSclassifier=strong | |||
|UniProt=P55210 | |UniProt=P55210 | ||
|association_with_transcript=-139bp_to_ENST00000369321,NM_001227,NM_033338,NM_033339,uc001lao.2,uc001lap.2,uc001laq.2,uc010qsa.1_5end | |||
|cluster_id=chr10:115439282..115439286,+ | |||
|description=CAGE_peak_5_at_CASP7_5end | |||
|id=chr10:115439282..115439286,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.47e-24!42;CL:0000860!8.15e-22!45;CL:0002009!5.91e-16!65;CL:0000839!8.71e-16!70;CL:0000557!1.63e-15!71;CL:0002194!5.88e-15!63;CL:0000576!5.88e-15!63;CL:0000040!5.88e-15!63;CL:0000559!5.88e-15!63;CL:0000766!1.85e-12!76;CL:0000763!1.08e-09!112;CL:0000049!1.08e-09!112;CL:0002031!4.05e-09!124;CL:0002087!5.79e-08!119;CL:0000738!2.19e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.28e-41;33!CL:0002057;9.28e-41;33!CL:0000473;9.52e-32;39!CL:0000234;9.52e-32;39!CL:0000576;4.82e-25;48!CL:0000766;5.73e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.52e-49,42;CL:0002057,4.52e-49,42;CL:0000473,1.92e-46,48;CL:0000234,1.92e-46,48;CL:0002009,1.29e-38,61;CL:0002194,3.71e-36,59;CL:0000576,3.71e-36,59;CL:0000040,3.71e-36,59;CL:0000559,3.71e-36,59;CL:0000557,7.02e-34,67;CL:0000839,2.09e-32,66;CL:0000766,1.37e-28,72;CL:0002031,4.19e-19,120;CL:0000763,1.05e-18,108;CL:0000049,1.05e-18,108;CL:0002087,1.69e-17,115;CL:0000738,4.61e-16,136;CL:0002032,5.88e-12,161;CL:0000837,5.88e-12,161;CL:0000037,7.04e-11,168;CL:0000988,9.85e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-34;42!CL:0000049;5.63e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.37e-15!80;UBERON:0001474!1.74e-14!86;UBERON:0004765!1.94e-12!101;UBERON:0001434!1.94e-12!101;UBERON:0002390!4.59e-12!102;UBERON:0003061!4.59e-12!102;UBERON:0002193!6.64e-11!112;UBERON:0002405!1.47e-09!115;UBERON:0003081!1.37e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-31,76;UBERON:0001474,8.12e-28,82;UBERON:0002405,1.09e-26,93;UBERON:0004765,1.65e-26,90;UBERON:0002390,5.50e-26,98;UBERON:0003061,5.50e-26,98;UBERON:0002193,1.68e-24,108;UBERON:0001434,2.23e-22,100;UBERON:0003081,2.06e-18,203;UBERON:0002204,6.49e-15,167;UBERON:0000926,3.72e-08,315;UBERON:0004120,3.72e-08,315;UBERON:0006603,3.72e-08,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.893922188854576,0.872338524100369,5.06599756336621,0,0.783556884599516,0.737201809504527,0.697801167972428,0.436882744260345,0.263766978228454,0.123766352960047,0.662794751455832,4.70627602516243,4.82155622419182,1.46062018077475,1.95173119516203,0.246242116153576,0.204000691244253,1.25381888591235,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0.387336002901508,0.142169232487422,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0,1.16318591023652,2.26725566213286,2.18325655069035,2.55671940596253,2.05583944010913,2.78735733805593,7.19230980805376,4.35473201099471,3.78371567821736,4.13694816883942,1.29096936716765,8.12558919566051,2.25890807451126,1.63743690034707,4.26974620445661,1.53041946185451,1.92557416245656,5.11469700639233,2.96866170168044,4.58766412529753,2.98357325372886,3.48251086354301,2.26954089876456,4.35975574296902,3.51748131359441,4.17186334736161,4.34377689410233,3.02699751316684,2.20966581592539,6.0127853613768,1.90129757680748,4.889898899196,1.67726916406701,0.898629049171961,3.60424542819615,1.12507910687956,2.28010194992999,4.37616689837998,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0.263384084775077,1.37696839079683,0.393010762749165,0.411202997999018,3.17654341242288,0.651844533267181,0.946895611469467,1.94826728407911,2.33961959458865,3.53527088969805,3.54454231333794,1.08321545506006,0,0,0,0.276350017785848,2.02862160014537,1.92772532110679,2.40786745280742,2.09071047609954,1.69964014046349,1.53288197440768,0.34362744548263,2.02415753615602,0.318565414324097,0,0.950452044448374,0,0,0,0.236777252044017,0,1.00803371612366,1.06976078313403,0.579297615531196,0,1.34140171940727,1.79007586580942,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.196468613246569,1.45718115317017,0,0,0.696518949197069,0,1.43094374583205,0,0,0.79504962946682,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0,0.33472061276467,1.20848795132744,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,1.89853131913626,0,0,0,0.872188104285069,0,0,0.264818361626438,0.573673241497627,0,1.68203280042692,1.06748995729705,0.24666754841716,0,0.67355336034844,0,0.454072282934794,1.15235184896,1.87457145467037,0,0,0.298897361103602,0.117434498643765,0.971237666208789,0,0,0.61417158655884,0.413303124703062,0,0.494533858557114,0,2.15585442544872,0,0.625592599359821,0,0.877955241761676,0,0.300476117813194,0.340296549480063,0,1.70845911054854,0.635795703478686,0.300091096084402,0.618315175430633,0,1.11670113798954,0.168776332241266,0.487185025805993,0.252433774244115,0.460249493211497,0.484938170456436,0,0.403008392910561,0.847802961552438,0,0,0,0,0.397589304964456,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,1.65629520055781,0.842923450390509,0,0.992645754591546,1.52515610864684,0,0.539325232640658,0.588664395376038,1.15424147083917,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0.402115889646523,0.185176890317059,0.977424915930974,0,0,0.811512834825538,0.352226082707465,0,0.925971025153221,1.14152491340759,0,0.858486162094873,0,0,0.148631162288728,0,1.00789276919316,1.41775097242386,0.447792613514241,0.581267877027924,0,0.985326475791887,0.880484340132261,0.621984346622316,0.288239906833923,0.12624243342638,0.63497894292169,0,0,0,0.411309970813294,0.901029173531752,0.571652865261156,0.336393253036082,0.43596006883328,0.36669142910475,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,1.02882949704857,0,0.532844358032199,1.14382394926518,1.62786481617433,0,0.325736184293735,1.06617584622764,0.791951872933429,0.301439377059586,0,0.099972991182057,3.64871341923571,2.00902836572851,0,0.718874566474748,1.14861935834114,0,0.434343920002738,0,0,0.112085143993527,0.985153801009636,0.862510299438069,0.385029108839245,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0.831883446123229,0.892144943985809,0.630809660135739,0.585707074963566,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.553107505625109,0.521301686808497,0.195801157462741,0.343143423810856,0.620304078368662,0.647142602455851,0.320182673410333,0.303127571446259,1.66435439510497,0.30239029332968,0,1.2276957863045,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.246381468041427,0,0.464841513839837,0.120859449591622,0,0.736647911487171,0.229628896329213,0,0.524497659837696,0.902399225814824,0.462092022626489,1.56869953835371,0,1.05551628892876,0,0.340187410553031,0.647747748306418,3.08454505380579,0.812839312631559,1.00337954770971,0.509752546090077,0,0,0.657779629937804,1.0457418040996,0.512900250232778,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|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.893922188854576,0.872338524100369,5.06599756336621,0,0.783556884599516,0.737201809504527,0.697801167972428,0.436882744260345,0.263766978228454,0.123766352960047,0.662794751455832,4.70627602516243,4.82155622419182,1.46062018077475,1.95173119516203,0.246242116153576,0.204000691244253,1.25381888591235,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0.387336002901508,0.142169232487422,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0,1.16318591023652,2.26725566213286,2.18325655069035,2.55671940596253,2.05583944010913,2.78735733805593,7.19230980805376,4.35473201099471,3.78371567821736,4.13694816883942,1.29096936716765,8.12558919566051,2.25890807451126,1.63743690034707,4.26974620445661,1.53041946185451,1.92557416245656,5.11469700639233,2.96866170168044,4.58766412529753,2.98357325372886,3.48251086354301,2.26954089876456,4.35975574296902,3.51748131359441,4.17186334736161,4.34377689410233,3.02699751316684,2.20966581592539,6.0127853613768,1.90129757680748,4.889898899196,1.67726916406701,0.898629049171961,3.60424542819615,1.12507910687956,2.28010194992999,4.37616689837998,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0.263384084775077,1.37696839079683,0.393010762749165,0.411202997999018,3.17654341242288,0.651844533267181,0.946895611469467,1.94826728407911,2.33961959458865,3.53527088969805,3.54454231333794,1.08321545506006,0,0,0,0.276350017785848,2.02862160014537,1.92772532110679,2.40786745280742,2.09071047609954,1.69964014046349,1.53288197440768,0.34362744548263,2.02415753615602,0.318565414324097,0,0.950452044448374,0,0,0,0.236777252044017,0,1.00803371612366,1.06976078313403,0.579297615531196,0,1.34140171940727,1.79007586580942,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.196468613246569,1.45718115317017,0,0,0.696518949197069,0,1.43094374583205,0,0,0.79504962946682,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0,0.33472061276467,1.20848795132744,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,1.89853131913626,0,0,0,0.872188104285069,0,0,0.264818361626438,0.573673241497627,0,1.68203280042692,1.06748995729705,0.24666754841716,0,0.67355336034844,0,0.454072282934794,1.15235184896,1.87457145467037,0,0,0.298897361103602,0.117434498643765,0.971237666208789,0,0,0.61417158655884,0.413303124703062,0,0.494533858557114,0,2.15585442544872,0,0.625592599359821,0,0.877955241761676,0,0.300476117813194,0.340296549480063,0,1.70845911054854,0.635795703478686,0.300091096084402,0.618315175430633,0,1.11670113798954,0.168776332241266,0.487185025805993,0.252433774244115,0.460249493211497,0.484938170456436,0,0.403008392910561,0.847802961552438,0,0,0,0,0.397589304964456,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,1.65629520055781,0.842923450390509,0,0.992645754591546,1.52515610864684,0,0.539325232640658,0.588664395376038,1.15424147083917,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0.402115889646523,0.185176890317059,0.977424915930974,0,0,0.811512834825538,0.352226082707465,0,0.925971025153221,1.14152491340759,0,0.858486162094873,0,0,0.148631162288728,0,1.00789276919316,1.41775097242386,0.447792613514241,0.581267877027924,0,0.985326475791887,0.880484340132261,0.621984346622316,0.288239906833923,0.12624243342638,0.63497894292169,0,0,0,0.411309970813294,0.901029173531752,0.571652865261156,0.336393253036082,0.43596006883328,0.36669142910475,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,1.02882949704857,0,0.532844358032199,1.14382394926518,1.62786481617433,0,0.325736184293735,1.06617584622764,0.791951872933429,0.301439377059586,0,0.099972991182057,3.64871341923571,2.00902836572851,0,0.718874566474748,1.14861935834114,0,0.434343920002738,0,0,0.112085143993527,0.985153801009636,0.862510299438069,0.385029108839245,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0.831883446123229,0.892144943985809,0.630809660135739,0.585707074963566,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.553107505625109,0.521301686808497,0.195801157462741,0.343143423810856,0.620304078368662,0.647142602455851,0.320182673410333,0.303127571446259,1.66435439510497,0.30239029332968,0,1.2276957863045,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.246381468041427,0,0.464841513839837,0.120859449591622,0,0.736647911487171,0.229628896329213,0,0.524497659837696,0.902399225814824,0.462092022626489,1.56869953835371,0,1.05551628892876,0,0.340187410553031,0.647747748306418,3.08454505380579,0.812839312631559,1.00337954770971,0.509752546090077,0,0,0.657779629937804,1.0457418040996,0.512900250232778,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| ||
|short_description=p5@CASP7 | |||
}} | }} |
Latest revision as of 12:00, 16 September 2015
Short description: | p5@CASP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CASP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000369321, NM_001227, NM_033338, NM_033339, uc001lao.2, uc001lap.2, uc001laq.2, uc010qsa.1_5end |
EntrezGene: | CASP7 |
HGNC: | 1508 |
UniProt: | P55210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.52e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.52e-49 | 42 |
defensive cell | 1.92e-46 | 48 |
phagocyte | 1.92e-46 | 48 |
macrophage dendritic cell progenitor | 1.29e-38 | 61 |
monopoietic cell | 3.71e-36 | 59 |
monocyte | 3.71e-36 | 59 |
monoblast | 3.71e-36 | 59 |
promonocyte | 3.71e-36 | 59 |
granulocyte monocyte progenitor cell | 7.02e-34 | 67 |
myeloid lineage restricted progenitor cell | 2.09e-32 | 66 |
myeloid leukocyte | 1.37e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 4.19e-19 | 120 |
myeloid cell | 1.05e-18 | 108 |
common myeloid progenitor | 1.05e-18 | 108 |
nongranular leukocyte | 1.69e-17 | 115 |
leukocyte | 4.61e-16 | 136 |
hematopoietic oligopotent progenitor cell | 5.88e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.88e-12 | 161 |
hematopoietic stem cell | 7.04e-11 | 168 |
hematopoietic cell | 9.85e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-31 | 76 |
bone element | 8.12e-28 | 82 |
immune system | 1.09e-26 | 93 |
skeletal element | 1.65e-26 | 90 |
hematopoietic system | 5.50e-26 | 98 |
blood island | 5.50e-26 | 98 |
hemolymphoid system | 1.68e-24 | 108 |
skeletal system | 2.23e-22 | 100 |
lateral plate mesoderm | 2.06e-18 | 203 |
musculoskeletal system | 6.49e-15 | 167 |
mesoderm | 3.72e-08 | 315 |
mesoderm-derived structure | 3.72e-08 | 315 |
presumptive mesoderm | 3.72e-08 | 315 |