FFCP PHASE1:Hg19::chr5:154092371..154092382,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:154092371..154092382,+
|short_description=p51@LARP1
|description=CAGE_peak_51_at_LARP1_5end
|association_with_transcript=-79bp_to_ENST00000336314,NM_015315...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23367 | |EntrezGene=23367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29531 | |HGNC=29531 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PKG0 | |UniProt=Q6PKG0 | ||
|association_with_transcript=-79bp_to_ENST00000336314,NM_015315,uc003lvo.2_5end | |||
|cluster_id=chr5:154092371..154092382,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_51_at_LARP1_5end | |||
|id=chr5:154092371..154092382,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.42e-12!5;CL:0000223!6.90e-08!59;CL:0000039!2.66e-07!7;CL:0000586!2.66e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.76e-21;5!CL:0000540;2.01e-18;6!CL:0000404;2.01e-18;6!CL:0002553;5.70e-13;1!CL:0002321;1.52e-07;15!CL:0002535;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.68e-21,5;CL:0000540,2.07e-18,6;CL:0000031,2.07e-18,6;CL:0000404,2.07e-18,6;CL:0000047,5.77e-14,8;CL:0002553,3.76e-13,1;CL:0002535,3.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;2.01e-18;6!UBERON:0008801;2.18e-13;1!UBERON:0006242;5.70e-13;1 | |||
|ontology_enrichment_disease=DOID:305!2.63e-10!106;DOID:0050687!1.02e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.83e-15!169;UBERON:0000925!1.83e-15!169;UBERON:0006595!1.83e-15!169;UBERON:0001007!5.19e-14!155;UBERON:0001555!5.19e-14!155;UBERON:0007026!5.19e-14!155;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0000077!1.11e-10!130;UBERON:0005911!1.18e-10!82;UBERON:0001041!1.07e-09!98;UBERON:0000466!1.17e-09!126;UBERON:0007023!3.49e-08!115;UBERON:0005153!5.09e-08!37;UBERON:0000464!6.51e-08!104;UBERON:0001004!9.42e-08!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.45e-24;2!UBERON:0001831;2.18e-13;1!UBERON:0001567;2.18e-13;1!UBERON:0001000;5.70e-13;1!UBERON:0005352;5.70e-13;1!UBERON:0003296;8.66e-13;4!UBERON:0010133;8.66e-13;4!UBERON:0002108;2.97e-10;4!UBERON:0001044;5.24e-09;6!UBERON:0003293;5.24e-09;6!UBERON:0003294;5.24e-09;6!UBERON:0010047;5.24e-09;6!UBERON:0003408;5.24e-09;6!UBERON:0000167;5.24e-09;6!UBERON:0001894;1.09e-07;7!UBERON:0001829;2.50e-07;2!UBERON:0004089;2.50e-07;2!UBERON:0006955;4.04e-07;2!UBERON:0004801;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.02e-25,2;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0001000,6.06e-13,1;UBERON:0005352,6.06e-13,1;UBERON:0003296,6.84e-13,4;UBERON:0010133,6.84e-13,4;UBERON:0002108,3.42e-10,4;UBERON:0001044,5.35e-09,6;UBERON:0003293,5.35e-09,6;UBERON:0003294,5.35e-09,6;UBERON:0010047,5.35e-09,6;UBERON:0000167,5.35e-09,6;UBERON:0001894,9.56e-08,7;UBERON:0006222,9.56e-08,7;UBERON:0001829,2.58e-07,2;UBERON:0004089,2.58e-07,2;UBERON:0006955,3.48e-07,2;UBERON:0004801,3.48e-07,2 | |||
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| ||
|short_description=p51@LARP1 | |||
}} | }} |
Latest revision as of 12:03, 16 September 2015
Short description: | p51@LARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_LARP1_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -79bp_to_ENST00000336314, NM_015315, uc003lvo.2_5end |
EntrezGene: | LARP1 |
HGNC: | 29531 |
UniProt: | Q6PKG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.68e-21 | 5 |
neuron | 2.07e-18 | 6 |
neuroblast | 2.07e-18 | 6 |
electrically signaling cell | 2.07e-18 | 6 |
neuronal stem cell | 5.77e-14 | 8 |
lung fibroblast | 3.76e-13 | 1 |
epithelial cell of cervix | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.02e-25 | 2 |
parotid gland | 2.32e-13 | 1 |
cheek | 2.32e-13 | 1 |
parotid gland primordium | 2.32e-13 | 1 |
vas deferens | 6.06e-13 | 1 |
spermatic cord | 6.06e-13 | 1 |
gland of diencephalon | 6.84e-13 | 4 |
neuroendocrine gland | 6.84e-13 | 4 |
small intestine | 3.42e-10 | 4 |
saliva-secreting gland | 5.35e-09 | 6 |
gland of oral region | 5.35e-09 | 6 |
gland of foregut | 5.35e-09 | 6 |
oral gland | 5.35e-09 | 6 |
oral cavity | 5.35e-09 | 6 |
diencephalon | 9.56e-08 | 7 |
future diencephalon | 9.56e-08 | 7 |
major salivary gland | 2.58e-07 | 2 |
midface | 2.58e-07 | 2 |
uterine epithelium | 3.48e-07 | 2 |
cervix epithelium | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.09e-07 | 2 |