FFCP PHASE1:Hg19::chr10:115614503..115614514,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374354 | |EntrezGene=374354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24731 | |HGNC=24731 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000468890_5end | |association_with_transcript=-68bp_to_ENST00000468890_5end | ||
|cluster_id=chr10:115614503..115614514,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_NHLRC2_5end | |description=CAGE_peak_4_at_NHLRC2_5end | ||
|id=chr10:115614503..115614514,+ | |id=chr10:115614503..115614514,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;3.08e-12;1!CL:0000557;3.08e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.48e-12;1!UBERON:0010226;1.48e-12;1!UBERON:0005062;2.40e-12;4!UBERON:0007284;2.40e-12;4!UBERON:0006603;8.63e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.34e-23;2!DOID:178;1.48e-12;1!DOID:326;1.48e-12;1!DOID:3978;1.48e-12;1!DOID:3394;1.48e-12;1!DOID:5844;1.48e-12;1!DOID:1287;2.68e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.13e-23,2;DOID:178,1.25e-12,1;DOID:326,1.25e-12,1;DOID:3978,1.25e-12,1;DOID:3394,1.25e-12,1;DOID:5844,1.25e-12,1;DOID:1287,2.47e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-17!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-22;2!UBERON:0002757;1.07e-22;2!UBERON:0010134;1.07e-22;2!UBERON:0005408;1.07e-22;2!UBERON:0001899;1.07e-22;2!UBERON:0003978;3.83e-16;3!UBERON:0000946;3.83e-16;3!UBERON:0007100;5.80e-16;25!UBERON:0002146;8.84e-13;1!UBERON:0005623;8.84e-13;1!UBERON:0002135;1.05e-12;1!UBERON:0001389;1.05e-12;1!UBERON:0000026;1.05e-12;1!UBERON:0008784;1.05e-12;1!UBERON:0006058;1.05e-12;1!UBERON:0003663;1.05e-12;1!UBERON:0004256;1.05e-12;1!UBERON:0004708;1.05e-12;1!UBERON:0002101;1.05e-12;1!UBERON:0004709;1.05e-12;1!UBERON:0002529;1.05e-12;1!UBERON:0010538;1.05e-12;1!UBERON:0003661;1.05e-12;1!UBERON:0010890;1.05e-12;1!UBERON:0002471;1.05e-12;1!UBERON:0001383;1.05e-12;1!UBERON:0010758;1.05e-12;1!UBERON:0010707;1.05e-12;1!UBERON:0000978;1.05e-12;1!UBERON:0002103;1.05e-12;1!UBERON:0001665;1.05e-12;1!UBERON:0003823;1.05e-12;1!UBERON:0000154;1.05e-12;1!UBERON:0010709;1.05e-12;1!UBERON:0002084;1.48e-12;1!UBERON:0002082;1.48e-12;1!UBERON:0007195;3.08e-12;1!UBERON:0003296;7.52e-12;4!UBERON:0010133;7.52e-12;4!UBERON:0002784;7.52e-12;4!UBERON:0001894;3.79e-07;7!UBERON:0005090;5.57e-07;2!UBERON:0001630;5.57e-07;2!UBERON:0002133;5.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.19e-22,2;UBERON:0002757,1.19e-22,2;UBERON:0010134,1.19e-22,2;UBERON:0005408,1.19e-22,2;UBERON:0001899,1.19e-22,2;UBERON:0003978,3.69e-16,3;UBERON:0009751,3.69e-16,3;UBERON:0000946,3.69e-16,3;UBERON:0002523,3.69e-16,3;UBERON:0005983,3.69e-16,3;UBERON:0002165,3.69e-16,3;UBERON:0002062,3.69e-16,3;UBERON:0007280,3.69e-16,3;UBERON:0007100,8.81e-15,27;UBERON:0002146,8.85e-13,1;UBERON:0005623,8.85e-13,1;UBERON:0002135,9.92e-13,1;UBERON:0005418,1.11e-12,1;UBERON:0001389,1.11e-12,1;UBERON:0000026,1.11e-12,1;UBERON:0008784,1.11e-12,1;UBERON:0006058,1.11e-12,1;UBERON:0003663,1.11e-12,1;UBERON:0004256,1.11e-12,1;UBERON:0004708,1.11e-12,1;UBERON:0002101,1.11e-12,1;UBERON:0004709,1.11e-12,1;UBERON:0002529,1.11e-12,1;UBERON:0010538,1.11e-12,1;UBERON:0003661,1.11e-12,1;UBERON:0010890,1.11e-12,1;UBERON:0002471,1.11e-12,1;UBERON:0001383,1.11e-12,1;UBERON:0004357,1.11e-12,1;UBERON:0004347,1.11e-12,1;UBERON:0005420,1.11e-12,1;UBERON:0005732,1.11e-12,1;UBERON:0010758,1.11e-12,1;UBERON:0010707,1.11e-12,1;UBERON:0000978,1.11e-12,1;UBERON:0002103,1.11e-12,1;UBERON:0001665,1.11e-12,1;UBERON:0003823,1.11e-12,1;UBERON:0000154,1.11e-12,1;UBERON:0010709,1.11e-12,1;UBERON:0005733,1.11e-12,1;UBERON:0005730,1.11e-12,1;UBERON:0002084,1.40e-12,1;UBERON:0002082,1.40e-12,1;UBERON:0010226,1.40e-12,1;UBERON:0007023,2.09e-12,114;UBERON:0007195,3.45e-12,1;UBERON:0003296,7.95e-12,4;UBERON:0010133,7.95e-12,4;UBERON:0002784,7.95e-12,4;UBERON:0003103,1.70e-07,68;UBERON:0004797,1.96e-07,7;UBERON:0001894,3.91e-07,7;UBERON:0006222,3.91e-07,7;UBERON:0002133,5.41e-07,2;UBERON:0005090,5.73e-07,2;UBERON:0001630,5.73e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0.540911356951966,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,2.21143911258348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.60129367765797,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0,3.90995361781156,4.35404805622199,0.717873024576814,2.99518500748487,6.43839072204856,10.2658870423261,0.739018197353989,0,0,0.393915911536118,0.659326867049332,0.471824806979294,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0,0.179287339332845,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0.492555124496034,0,0,0.439656701034247,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,1.0027595760908,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,1.36329340684902,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,1.07140367175657,1.3451348888753,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0.470958557103084,0,0,0.913158720509496,0,0.47775168788705,0.428859265059938,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0.098150233615243,0,3.23714418593947,1.02662806856247,0,0,0,0.397901550322736,0,0.5647304101948,0,0,1.92935395269862,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0.199882311849858,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0.540911356951966,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,2.21143911258348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.60129367765797,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0,3.90995361781156,4.35404805622199,0.717873024576814,2.99518500748487,6.43839072204856,10.2658870423261,0.739018197353989,0,0,0.393915911536118,0.659326867049332,0.471824806979294,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0,0.179287339332845,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0.492555124496034,0,0,0.439656701034247,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,1.0027595760908,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,1.36329340684902,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,1.07140367175657,1.3451348888753,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0.470958557103084,0,0,0.913158720509496,0,0.47775168788705,0.428859265059938,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0.098150233615243,0,3.23714418593947,1.02662806856247,0,0,0,0.397901550322736,0,0.5647304101948,0,0,1.92935395269862,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0.199882311849858,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | ||
|short_description=p4@NHLRC2 | |short_description=p4@NHLRC2 | ||
}} | }} |
Latest revision as of 12:10, 16 September 2015
Short description: | p4@NHLRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NHLRC2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -68bp_to_ENST00000468890_5end |
EntrezGene: | NHLRC2 |
HGNC: | 24731 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.13e-23 | 2 |
vascular disease | 1.25e-12 | 1 |
ischemia | 1.25e-12 | 1 |
extrinsic cardiomyopathy | 1.25e-12 | 1 |
myocardial ischemia | 1.25e-12 | 1 |
myocardial infarction | 1.25e-12 | 1 |
cardiovascular system disease | 2.47e-12 | 4 |