FFCP PHASE1:Hg19::chr13:110838825..110838846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1282 | |EntrezGene=1282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2202 | |HGNC=2202 | ||
|TSSclassifier=strong | |||
|UniProt=P02462 | |UniProt=P02462 | ||
|association_with_transcript=0bp_to_BC047305_5end | |association_with_transcript=0bp_to_BC047305_5end | ||
|cluster_id=chr13:110838825..110838846,- | |||
|description=CAGE_peak_17_at_COL4A1_5end | |description=CAGE_peak_17_at_COL4A1_5end | ||
|id=chr13:110838825..110838846,- | |id=chr13:110838825..110838846,- | ||
|ontology_enrichment_celltype=CL:0005020!2.09e-10!6;CL:0002138!2.09e-10!6;CL:0005022!2.09e-10!6 | |ontology_enrichment_celltype=CL:0005020!2.09e-10!6;CL:0002138!2.09e-10!6;CL:0005022!2.09e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.67e-23;3!CL:0002262;1.38e-09;2!CL:1000398;1.38e-09;2!CL:0000349;1.44e-08;19!CL:0002521;8.38e-07;3!CL:0002615;8.38e-07;3!CL:0002567;8.38e-07;3!CL:0002579;8.38e-07;3 | |ontology_enrichment_celltype_v019=CL:0002541;1.67e-23;3!CL:0002262;1.38e-09;2!CL:1000398;1.38e-09;2!CL:0000349;1.44e-08;19!CL:0002521;8.38e-07;3!CL:0002615;8.38e-07;3!CL:0002567;8.38e-07;3!CL:0002579;8.38e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.68e-23,3;CL:0002262,1.22e-09,2;CL:1000398,1.22e-09,2;CL:0000349,1.62e-08,19;CL:0002521,6.50e-07,3;CL:0002567,6.88e-07,3;CL:0002615,7.28e-07,3;CL:0002579,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.01e-18;1 | |ontology_enrichment_development_v019=UBERON:0003124;8.01e-18;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.15e-10!10;UBERON:0001473!2.56e-10!8;UBERON:0004536!2.56e-10!8;UBERON:0006558!2.56e-10!8 | |ontology_enrichment_uberon=UBERON:0002465!2.15e-10!10;UBERON:0001473!2.56e-10!8;UBERON:0004536!2.56e-10!8;UBERON:0006558!2.56e-10!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.67e-23;3!UBERON:0000920;1.67e-23;3!UBERON:0005631;9.80e-16;10!UBERON:0000158;9.80e-16;10!UBERON:0003688;5.67e-12;6!UBERON:0002358;5.67e-12;6!UBERON:0003684;5.67e-12;6!UBERON:0001178;5.67e-12;6!UBERON:0000478;1.81e-11;24!UBERON:0001281;1.38e-09;2!UBERON:0003497;1.38e-09;2!UBERON:0003909;1.38e-09;2!UBERON:0003835;1.38e-09;2!UBERON:0004457;2.75e-08;9!UBERON:0000042;2.75e-08;9!UBERON:0002190;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.67e-23;3!UBERON:0000920;1.67e-23;3!UBERON:0005631;9.80e-16;10!UBERON:0000158;9.80e-16;10!UBERON:0003688;5.67e-12;6!UBERON:0002358;5.67e-12;6!UBERON:0003684;5.67e-12;6!UBERON:0001178;5.67e-12;6!UBERON:0000478;1.81e-11;24!UBERON:0001281;1.38e-09;2!UBERON:0003497;1.38e-09;2!UBERON:0003909;1.38e-09;2!UBERON:0003835;1.38e-09;2!UBERON:0004457;2.75e-08;9!UBERON:0000042;2.75e-08;9!UBERON:0002190;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.68e-23,3;UBERON:0003124,4.28e-22,7;UBERON:0005631,2.94e-19,14;UBERON:0000158,2.94e-19,14;UBERON:0003688,4.81e-12,6;UBERON:0002358,4.81e-12,6;UBERON:0003684,4.81e-12,6;UBERON:0001178,4.81e-12,6;UBERON:0000478,2.19e-11,24;UBERON:0001281,1.22e-09,2;UBERON:0003497,1.22e-09,2;UBERON:0003909,1.22e-09,2;UBERON:0003835,1.22e-09,2;UBERON:0004923,7.37e-09,66;UBERON:0002190,6.50e-07,3;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3 | |||
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| ||
|short_description=p17@COL4A1 | |short_description=p17@COL4A1 | ||
}} | }} |
Latest revision as of 12:24, 16 September 2015
Short description: | p17@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_COL4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC047305_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | P02462 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.68e-23 | 3 |
endothelial cell of sinusoid | 1.22e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.22e-09 | 2 |
extraembryonic cell | 1.62e-08 | 19 |
subcutaneous fat cell | 6.50e-07 | 3 |
light melanocyte | 6.88e-07 | 3 |
adipocyte of omentum tissue | 7.28e-07 | 3 |
omentum preadipocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.68e-23 | 3 |
chorion | 4.28e-22 | 7 |
extraembryonic membrane | 2.94e-19 | 14 |
membranous layer | 2.94e-19 | 14 |
omentum | 4.81e-12 | 6 |
peritoneum | 4.81e-12 | 6 |
abdominal cavity | 4.81e-12 | 6 |
visceral peritoneum | 4.81e-12 | 6 |
extraembryonic structure | 2.19e-11 | 24 |
hepatic sinusoid | 1.22e-09 | 2 |
abdomen blood vessel | 1.22e-09 | 2 |
sinusoid | 1.22e-09 | 2 |
abdominal segment blood vessel | 1.22e-09 | 2 |
organ component layer | 7.37e-09 | 66 |
subcutaneous adipose tissue | 6.50e-07 | 3 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |