FFCP PHASE1:Hg19::chr1:235491168..235491187,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51742 | |EntrezGene=51742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15550 | |HGNC=15550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462969_5end | |association_with_transcript=0bp_to_ENST00000462969_5end | ||
|cluster_id=chr1:235491168..235491187,- | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_3_at_ARID4B_5end | |description=CAGE_peak_3_at_ARID4B_5end | ||
|id=chr1:235491168..235491187,- | |id=chr1:235491168..235491187,- | ||
|ontology_enrichment_celltype=CL:0000738!1.01e-23!140;CL:0000037!2.05e-18!172;CL:0000566!2.05e-18!172;CL:0002031!3.46e-18!124;CL:0002087!7.83e-18!119;CL:0002032!2.62e-17!165;CL:0000837!2.62e-17!165;CL:0000988!6.00e-17!182;CL:0000766!7.96e-15!76;CL:0002057!4.70e-13!42;CL:0000860!3.57e-12!45;CL:0000557!4.28e-11!71;CL:0000839!1.16e-10!70;CL:0002009!3.43e-10!65;CL:0000763!3.80e-10!112;CL:0000049!3.80e-10!112;CL:0002194!1.52e-09!63;CL:0000576!1.52e-09!63;CL:0000040!1.52e-09!63;CL:0000559!1.52e-09!63;CL:0000542!1.39e-07!53;CL:0000051!1.39e-07!53;CL:0000838!1.89e-07!52;CL:0000791!8.09e-07!18;CL:0000789!8.09e-07!18;CL:0002420!8.09e-07!18;CL:0002419!8.09e-07!18;CL:0000790!8.09e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.01e-23!140;CL:0000037!2.05e-18!172;CL:0000566!2.05e-18!172;CL:0002031!3.46e-18!124;CL:0002087!7.83e-18!119;CL:0002032!2.62e-17!165;CL:0000837!2.62e-17!165;CL:0000988!6.00e-17!182;CL:0000766!7.96e-15!76;CL:0002057!4.70e-13!42;CL:0000860!3.57e-12!45;CL:0000557!4.28e-11!71;CL:0000839!1.16e-10!70;CL:0002009!3.43e-10!65;CL:0000763!3.80e-10!112;CL:0000049!3.80e-10!112;CL:0002194!1.52e-09!63;CL:0000576!1.52e-09!63;CL:0000040!1.52e-09!63;CL:0000559!1.52e-09!63;CL:0000542!1.39e-07!53;CL:0000051!1.39e-07!53;CL:0000838!1.89e-07!52;CL:0000791!8.09e-07!18;CL:0000789!8.09e-07!18;CL:0002420!8.09e-07!18;CL:0002419!8.09e-07!18;CL:0000790!8.09e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.53e-14;33!CL:0002057;4.53e-14;33!CL:0000094;8.95e-14;8!CL:0000081;2.83e-12;11!CL:0000473;1.05e-09;39!CL:0000234;1.05e-09;39!CL:0000766;1.33e-09;69!CL:0000576;4.19e-09;48!CL:0000775;2.66e-08;3!CL:0000623;3.89e-08;3!CL:0002087;4.42e-08;104!CL:0000226;7.50e-07;3!CL:0000842;7.50e-07;3!CL:0000791;9.26e-07;18!CL:0000789;9.26e-07;18!CL:0002419;9.26e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.38e-24,136;CL:0000766,2.04e-19,72;CL:0000037,2.80e-18,168;CL:0000988,1.17e-17,177;CL:0002087,2.62e-17,115;CL:0000860,2.27e-16,42;CL:0002057,2.27e-16,42;CL:0002031,6.24e-16,120;CL:0002032,1.33e-15,161;CL:0000837,1.33e-15,161;CL:0000094,6.54e-14,8;CL:0000473,1.32e-13,48;CL:0000234,1.32e-13,48;CL:0000081,1.48e-12,11;CL:0000839,2.82e-11,66;CL:0000557,5.10e-11,67;CL:0000763,3.22e-10,108;CL:0000049,3.22e-10,108;CL:0002194,8.70e-10,59;CL:0000576,8.70e-10,59;CL:0000040,8.70e-10,59;CL:0000559,8.70e-10,59;CL:0002009,2.66e-09,61;CL:0000775,2.58e-08,3;CL:0000623,4.18e-08,3;CL:0000825,4.18e-08,3;CL:0000226,3.54e-07,3;CL:0000842,3.54e-07,3;CL:0000791,7.12e-07,18;CL:0000789,7.12e-07,18;CL:0002420,7.12e-07,18;CL:0002419,7.12e-07,18;CL:0000790,7.12e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;8.27e-12;42!UBERON:0006241;6.41e-08;3!UBERON:0003057;6.41e-08;3!CL:0000790;9.26e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.58e-13!102;UBERON:0003061!5.58e-13!102;UBERON:0002193!2.78e-10!112;UBERON:0002371!1.01e-09!80;UBERON:0001049!7.54e-09!57;UBERON:0005068!7.54e-09!57;UBERON:0006241!7.54e-09!57;UBERON:0007135!7.54e-09!57;UBERON:0001474!6.97e-08!86;UBERON:0005743!8.36e-08!86;UBERON:0001017!8.78e-08!82;UBERON:0007023!2.38e-07!115;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0002020!3.63e-07!34;UBERON:0003528!3.63e-07!34;UBERON:0001893!3.90e-07!34;UBERON:0002780!5.00e-07!41;UBERON:0001890!5.00e-07!41;UBERON:0006240!5.00e-07!41;UBERON:0004765!7.51e-07!101;UBERON:0001434!7.51e-07!101;UBERON:0000955!8.84e-07!69;UBERON:0006238!8.84e-07!69;UBERON:0002791!9.70e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.23e-08;6!UBERON:0000125;2.37e-08;9!UBERON:0002308;2.37e-08;9!UBERON:0002240;6.41e-08;3!UBERON:0005174;6.41e-08;3!UBERON:0001137;6.41e-08;3!UBERON:0000988;3.14e-07;3 | |||
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| ||
|short_description=p3@ARID4B | |short_description=p3@ARID4B | ||
}} | }} |
Latest revision as of 12:29, 16 September 2015
Short description: | p3@ARID4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARID4B_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000462969_5end |
EntrezGene: | ARID4B |
HGNC: | 15550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.56e-13 | 98 |
blood island | 1.56e-13 | 98 |
neural tube | 6.36e-12 | 56 |
neural rod | 6.36e-12 | 56 |
future spinal cord | 6.36e-12 | 56 |
neural keel | 6.36e-12 | 56 |
hemolymphoid system | 1.68e-11 | 108 |
bone marrow | 6.56e-11 | 76 |
central nervous system | 7.89e-10 | 81 |
bone element | 1.20e-09 | 82 |
nervous system | 3.52e-09 | 89 |
neural plate | 4.47e-09 | 82 |
presumptive neural plate | 4.47e-09 | 82 |
regional part of nervous system | 6.88e-09 | 53 |
regional part of brain | 6.88e-09 | 53 |
brainstem | 1.31e-08 | 6 |
immune system | 1.35e-08 | 93 |
neurectoderm | 2.24e-08 | 86 |
skeletal element | 3.05e-08 | 90 |
neural nucleus | 3.13e-08 | 9 |
nucleus of brain | 3.13e-08 | 9 |
posterior neural tube | 4.68e-08 | 15 |
chordal neural plate | 4.68e-08 | 15 |
spinal cord | 8.80e-08 | 3 |
dorsal region element | 8.80e-08 | 3 |
dorsum | 8.80e-08 | 3 |
skeletal system | 1.54e-07 | 100 |
brain | 1.66e-07 | 68 |
future brain | 1.66e-07 | 68 |
pons | 2.74e-07 | 3 |