FFCP PHASE1:Hg19::chr1:235492300..235492340,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:235492300..235492340,+ to FFCP PHASE1:Hg19::chr1:235492300..235492340,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9453 | |EntrezGene=9453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4249 | |HGNC=4249 | ||
|TSSclassifier=strong | |||
|UniProt=O95749 | |UniProt=O95749 | ||
|association_with_transcript=0bp_to_ENST00000476121,uc001hwy.2_5end | |||
|cluster_id=chr1:235492300..235492340,+ | |||
|description=CAGE_peak_3_at_GGPS1_5end | |||
|id=chr1:235492300..235492340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.37e-12!51;DOID:0060083!9.37e-12!51;DOID:1240!1.17e-10!39;DOID:8692!3.04e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.05e-10;39!DOID:8692;5.26e-09;31!DOID:2531;2.22e-08;51!DOID:0060083;2.22e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.95e-12,51;DOID:0060083,1.95e-12,51;DOID:1240,2.81e-12,39;DOID:8692,1.83e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.01e-10!94;UBERON:0001016!4.01e-10!94;UBERON:0001017!7.62e-10!82;UBERON:0005743!1.04e-09!86;UBERON:0000955!9.75e-09!69;UBERON:0006238!9.75e-09!69;UBERON:0002616!3.63e-07!59;UBERON:0002020!3.99e-07!34;UBERON:0003528!3.99e-07!34;UBERON:0001893!4.12e-07!34;UBERON:0001049!5.48e-07!57;UBERON:0005068!5.48e-07!57;UBERON:0006241!5.48e-07!57;UBERON:0007135!5.48e-07!57;UBERON:0001869!8.59e-07!32;UBERON:0002791!8.98e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-10,89;UBERON:0001017,7.29e-10,81;UBERON:0000955,2.16e-08,68;UBERON:0006238,2.16e-08,68;UBERON:0003528,1.62e-07,34;UBERON:0002020,1.62e-07,34;UBERON:0001893,1.67e-07,34;UBERON:0001869,3.94e-07,32;UBERON:0000073,5.14e-07,53;UBERON:0002616,5.14e-07,53;UBERON:0001049,5.48e-07,56;UBERON:0005068,5.48e-07,56;UBERON:0006241,5.48e-07,56;UBERON:0007135,5.48e-07,56;UBERON:0002791,6.38e-07,32;UBERON:0001950,8.65e-07,20 | |||
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| ||
|short_description=p3@GGPS1 | |||
}} | }} |
Latest revision as of 12:35, 16 September 2015
Short description: | p3@GGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GGPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476121, uc001hwy.2_5end |
EntrezGene: | GGPS1 |
HGNC: | 4249 |
UniProt: | O95749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.76e-10 | 89 |
central nervous system | 7.29e-10 | 81 |
brain | 2.16e-08 | 68 |
future brain | 2.16e-08 | 68 |
brain grey matter | 1.62e-07 | 34 |
gray matter | 1.62e-07 | 34 |
telencephalon | 1.67e-07 | 34 |
cerebral hemisphere | 3.94e-07 | 32 |
regional part of nervous system | 5.14e-07 | 53 |
regional part of brain | 5.14e-07 | 53 |
neural tube | 5.48e-07 | 56 |
neural rod | 5.48e-07 | 56 |
future spinal cord | 5.48e-07 | 56 |
neural keel | 5.48e-07 | 56 |
regional part of telencephalon | 6.38e-07 | 32 |
neocortex | 8.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.95e-12 | 51 |
immune system cancer | 1.95e-12 | 51 |
leukemia | 2.81e-12 | 39 |
myeloid leukemia | 1.83e-09 | 31 |