FFCP PHASE1:Hg19::chrX:80377100..80377111,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:80377100..80377111,-
|short_description=p5@HMGN5
|description=CAGE_peak_5_at_HMGN5_5end
|association_with_transcript=25bp_to_ENST00000373250_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79366 | |EntrezGene=79366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8013 | |HGNC=8013 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSK6 | |UniProt=Q5JSK6 | ||
|association_with_transcript=25bp_to_ENST00000373250_5end | |||
|cluster_id=chrX:80377100..80377111,- | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_5_at_HMGN5_5end | |||
|id=chrX:80377100..80377111,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.69e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!1.31e-16!239;DOID:162!1.98e-16!235;DOID:2531!3.49e-15!51;DOID:0060083!3.49e-15!51;DOID:1240!4.39e-12!39;DOID:8692!2.25e-09!31;DOID:0050686!2.69e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.93e-15;39!DOID:2531;4.38e-13;51!DOID:0060083;4.38e-13;51!DOID:8692;1.94e-09;31!DOID:1036;1.01e-07;8!DOID:74;5.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.90e-19,51;DOID:0060083,3.90e-19,51;DOID:162,5.73e-17,235;DOID:1240,6.22e-17,39;DOID:14566,2.41e-16,239;DOID:8692,2.81e-09,31;DOID:1036,1.42e-07,8;DOID:0050687,4.80e-07,143;DOID:74,5.33e-07,2;DOID:0050686,8.92e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.36e-22;9!UBERON:0001557;7.36e-22;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.50e-22,9;UBERON:0001557,1.04e-09,19 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.251085279189606,1.75750833220288,2.38091709404843,2.75487734597877,0,0,0,0,0,0,2.32401601740905,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0,0.87834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,1.04614076386261,0,0,0,0,0.122834317311768,0,0,0,0,0,0.505008341862199,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.609868530647977,0.397589304964456,0.116193942869518,0.207322110030741,1.26160425437814,0,0,0.643240938192885,0,0,0,1.53798840051797,3.20310911148393,2.16909926895134,2.31617342738027,1.52515610864684,1.66089433377768,1.61797569792197,1.96221465125346,1.92373578473195,0,0,0,0,0,0,0.590789906681404,2.20731549707325,0,0.857839051492628,0,0,0.402115889646523,0,0,0,1.44331342025273,0.34779121492523,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0.12624243342638,0.380987365753014,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,2.85273810081437,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0.308419387605311,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,1.8300481571743,0.512900250232778,0,0,0.412164046590889,2.28923662045859,1.65018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.340906509664404,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,1.22520107990516,1.67222857613147,2.30830740762312,1.35169502361987,2.55082036366116,0,0,0.423347165447766,2.59697552219644,1.12318871245384,0.456469358066384,7.36395510133209,0,0,0.1605880751037,0.605399121573143,0,1.03051603426729,0.614481528616916,0.447352215784832,1.33479313369527,0.19538809540204,1.9488432172667,0,0.270455678475983,0.99921590399346,2.81974010175699,0,0.146508179271894,0,2.89752799121444,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.19924798825107,0,1.0077309914171,0.20453736500431,0.492339221844278,0,0.449341755736634,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0.349839999984783,0,0.455173793141999,1.01701460117107,0.472775363535873,0.689486746482929,3.2076507472158,0,0,0.482385754501632,0,0.663475559587348,0,0.219385397153973,0.10893846351899,0.139423744278603,0.307801034015188,0,0.23056390438806,0.359030577639089,0,0.31900115973192,0.0915975934018623,0,0,0.470940769185074,0.664846727600626,1.57916962432026,1.17637520590644,1.00692952185506,2.27704479269022,1.58936578980379,0.632994193584081,0,0.141353071433941,3.02944095638928,0,0.265372693510018,0,0,0.494255755786011,0.522109747527277,0.134802265961354,0.802577647298789,0,0.91227394607833,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0.970722711091971,0.347119476670262,0,0,1.39781334593624,0.859930162358083,3.87025325156341,3.72755517139546,3.20250282507516,0.290967049465258,0,0.451961481561065,0.137041924646751,0,0.443175571691151,1.17330829640882,0.0801588202515337,0,0,0.432271251462318,0,0.686379991447858,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0.821432273351958,0,0.429765441419957,1.31443677139657,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,3.30225995056559,0,0.953423842781029,1.44677833618517,2.06309154895851,2.49264202817511,0,0,0.0607495566580247,0.670869375198532,0.709251365692784,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.574647645245373,0,0,0.439656701034247,0,1.0342636508924,0.26446520348538,0,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0.730755590285376,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.250381861413,0,0.443716206147409,0,1.24513771442608,0,0,0,0,3.27834434064817,1.44921028610825,0,0,0.554805861502613,0,0,0,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| ||
|short_description=p5@HMGN5 | |||
}} | }} |
Latest revision as of 12:38, 16 September 2015
Short description: | p5@HMGN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMGN5_5end |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | 25bp_to_ENST00000373250_5end |
EntrezGene: | HMGN5 |
HGNC: | 8013 |
UniProt: | Q5JSK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.50e-22 | 9 |
upper respiratory tract | 1.04e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.90e-19 | 51 |
immune system cancer | 3.90e-19 | 51 |
cancer | 5.73e-17 | 235 |
leukemia | 6.22e-17 | 39 |
disease of cellular proliferation | 2.41e-16 | 239 |
myeloid leukemia | 2.81e-09 | 31 |
chronic leukemia | 1.42e-07 | 8 |
cell type cancer | 4.80e-07 | 143 |
hematopoietic system disease | 5.33e-07 | 2 |
organ system cancer | 8.92e-07 | 137 |