FFCP PHASE1:Hg19::chrX:80377100..80377111,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:80377100..80377111,- to FFCP PHASE1:Hg19::chrX:80377100..80377111,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79366 | |EntrezGene=79366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8013 | |HGNC=8013 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSK6 | |UniProt=Q5JSK6 | ||
|association_with_transcript=25bp_to_ENST00000373250_5end | |||
|cluster_id=chrX:80377100..80377111,- | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_5_at_HMGN5_5end | |||
|id=chrX:80377100..80377111,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.69e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!1.31e-16!239;DOID:162!1.98e-16!235;DOID:2531!3.49e-15!51;DOID:0060083!3.49e-15!51;DOID:1240!4.39e-12!39;DOID:8692!2.25e-09!31;DOID:0050686!2.69e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.93e-15;39!DOID:2531;4.38e-13;51!DOID:0060083;4.38e-13;51!DOID:8692;1.94e-09;31!DOID:1036;1.01e-07;8!DOID:74;5.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.90e-19,51;DOID:0060083,3.90e-19,51;DOID:162,5.73e-17,235;DOID:1240,6.22e-17,39;DOID:14566,2.41e-16,239;DOID:8692,2.81e-09,31;DOID:1036,1.42e-07,8;DOID:0050687,4.80e-07,143;DOID:74,5.33e-07,2;DOID:0050686,8.92e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.36e-22;9!UBERON:0001557;7.36e-22;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.50e-22,9;UBERON:0001557,1.04e-09,19 | |||
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| ||
|short_description=p5@HMGN5 | |||
}} | }} |
Latest revision as of 12:38, 16 September 2015
Short description: | p5@HMGN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMGN5_5end |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | 25bp_to_ENST00000373250_5end |
EntrezGene: | HMGN5 |
HGNC: | 8013 |
UniProt: | Q5JSK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.50e-22 | 9 |
upper respiratory tract | 1.04e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.90e-19 | 51 |
immune system cancer | 3.90e-19 | 51 |
cancer | 5.73e-17 | 235 |
leukemia | 6.22e-17 | 39 |
disease of cellular proliferation | 2.41e-16 | 239 |
myeloid leukemia | 2.81e-09 | 31 |
chronic leukemia | 1.42e-07 | 8 |
cell type cancer | 4.80e-07 | 143 |
hematopoietic system disease | 5.33e-07 | 2 |
organ system cancer | 8.92e-07 | 137 |