FFCP PHASE2:Hg19::chrX:80377100..80377111,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:79366 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8013 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=79366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8013 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5JSK6 | ||
|association_with_transcript=25bp_to_ENST00000373250_5end | |association_with_transcript=25bp_to_ENST00000373250_5end | ||
|cluster_id=chrX:80377100..80377111,- | |cluster_id=chrX:80377100..80377111,- | ||
Latest revision as of 12:38, 16 September 2015
| Short description: | p5@HMGN5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_HMGN5_5end |
| Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
| Association with transcript: | 25bp_to_ENST00000373250_5end |
| EntrezGene: | HMGN5 |
| HGNC: | 8013 |
| UniProt: | Q5JSK6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@HMGN5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| larynx | 1.50e-22 | 9 |
| upper respiratory tract | 1.04e-09 | 19 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 3.90e-19 | 51 |
| immune system cancer | 3.90e-19 | 51 |
| cancer | 5.73e-17 | 235 |
| leukemia | 6.22e-17 | 39 |
| disease of cellular proliferation | 2.41e-16 | 239 |
| myeloid leukemia | 2.81e-09 | 31 |
| chronic leukemia | 1.42e-07 | 8 |
| cell type cancer | 4.80e-07 | 143 |
| hematopoietic system disease | 5.33e-07 | 2 |
| organ system cancer | 8.92e-07 | 137 |
Showing 1 to 10 of 10 entries
