FFCP PHASE1:Hg19::chrX:80457565..80457674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6451 | |EntrezGene=6451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10823 | |HGNC=10823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481106_5end | |association_with_transcript=0bp_to_ENST00000481106_5end | ||
|cluster_id=chrX:80457565..80457674,+ | |||
|description=CAGE_peak_1_at_SH3BGRL_5end | |description=CAGE_peak_1_at_SH3BGRL_5end | ||
|id=chrX:80457565..80457674,+ | |id=chrX:80457565..80457674,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.87e-43!172;CL:0000566!4.87e-43!172;CL:0000738!6.58e-41!140;CL:0002032!1.05e-40!165;CL:0000837!1.05e-40!165;CL:0000988!8.80e-38!182;CL:0000763!4.46e-35!112;CL:0000049!4.46e-35!112;CL:0002031!6.52e-35!124;CL:0000766!9.87e-33!76;CL:0002087!1.91e-31!119;CL:0000839!1.41e-30!70;CL:0000557!1.57e-29!71;CL:0002009!2.78e-28!65;CL:0002194!3.76e-27!63;CL:0000576!3.76e-27!63;CL:0000040!3.76e-27!63;CL:0000559!3.76e-27!63;CL:0002057!1.24e-23!42;CL:0002320!3.97e-22!365;CL:0000134!8.75e-22!358;CL:0000860!5.34e-20!45;CL:0000048!4.03e-18!430;CL:0000034!2.65e-17!444;CL:0000723!3.27e-17!436;CL:0000219!2.53e-15!390;CL:0000451!3.26e-07!10 | |ontology_enrichment_celltype=CL:0000037!4.87e-43!172;CL:0000566!4.87e-43!172;CL:0000738!6.58e-41!140;CL:0002032!1.05e-40!165;CL:0000837!1.05e-40!165;CL:0000988!8.80e-38!182;CL:0000763!4.46e-35!112;CL:0000049!4.46e-35!112;CL:0002031!6.52e-35!124;CL:0000766!9.87e-33!76;CL:0002087!1.91e-31!119;CL:0000839!1.41e-30!70;CL:0000557!1.57e-29!71;CL:0002009!2.78e-28!65;CL:0002194!3.76e-27!63;CL:0000576!3.76e-27!63;CL:0000040!3.76e-27!63;CL:0000559!3.76e-27!63;CL:0002057!1.24e-23!42;CL:0002320!3.97e-22!365;CL:0000134!8.75e-22!358;CL:0000860!5.34e-20!45;CL:0000048!4.03e-18!430;CL:0000034!2.65e-17!444;CL:0000723!3.27e-17!436;CL:0000219!2.53e-15!390;CL:0000451!3.26e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.92e-17;39!CL:0000234;2.92e-17;39!CL:0000860;3.92e-17;33!CL:0002057;3.92e-17;33!CL:0000576;4.24e-17;48!CL:0000766;4.69e-15;69!CL:0000763;1.18e-10;100!CL:0000738;6.29e-10;136!CL:0002087;1.43e-09;104!CL:0000219;1.51e-07;193!CL:0000451;3.28e-07;10!CL:0000988;7.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.34e-45,168;CL:0000738,2.40e-43,136;CL:0002032,7.53e-43,161;CL:0000837,7.53e-43,161;CL:0000988,1.87e-40,177;CL:0000763,1.16e-37,108;CL:0000049,1.16e-37,108;CL:0002031,2.69e-37,120;CL:0000766,4.63e-36,72;CL:0000839,5.93e-34,66;CL:0002087,9.99e-34,115;CL:0000557,8.83e-33,67;CL:0002009,1.17e-31,61;CL:0002194,1.67e-30,59;CL:0000576,1.67e-30,59;CL:0000040,1.67e-30,59;CL:0000559,1.67e-30,59;CL:0000473,4.60e-27,48;CL:0000234,4.60e-27,48;CL:0000860,1.24e-23,42;CL:0002057,1.24e-23,42;CL:0002320,1.27e-23,361;CL:0000134,2.81e-23,354;CL:0000048,1.95e-19,427;CL:0000034,1.41e-18,441;CL:0000723,1.73e-18,433;CL:0000219,1.62e-16,386;CL:0000451,3.26e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-17;42!CL:0000049;6.92e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-32!102;UBERON:0003061!1.23e-32!102;UBERON:0002193!1.89e-29!112;UBERON:0002371!1.35e-27!80;UBERON:0001474!3.94e-25!86;UBERON:0004765!5.00e-24!101;UBERON:0001434!5.00e-24!101;UBERON:0002384!1.67e-21!375;UBERON:0002405!1.86e-15!115;UBERON:0002204!6.32e-14!167;UBERON:0003081!4.26e-10!216;UBERON:0007023!2.34e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.23e-32!102;UBERON:0003061!1.23e-32!102;UBERON:0002193!1.89e-29!112;UBERON:0002371!1.35e-27!80;UBERON:0001474!3.94e-25!86;UBERON:0004765!5.00e-24!101;UBERON:0001434!5.00e-24!101;UBERON:0002384!1.67e-21!375;UBERON:0002405!1.86e-15!115;UBERON:0002204!6.32e-14!167;UBERON:0003081!4.26e-10!216;UBERON:0007023!2.34e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.85e-35,98;UBERON:0003061,2.85e-35,98;UBERON:0002193,1.00e-31,108;UBERON:0002371,2.11e-30,76;UBERON:0004765,9.20e-29,90;UBERON:0001474,1.32e-27,82;UBERON:0002405,1.86e-27,93;UBERON:0001434,1.50e-26,100;UBERON:0002384,5.85e-23,371;UBERON:0002204,2.21e-15,167;UBERON:0003081,1.86e-13,203;UBERON:0000926,1.58e-07,315;UBERON:0004120,1.58e-07,315;UBERON:0006603,1.58e-07,315;UBERON:0007023,2.66e-07,114 | |||
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| ||
|short_description=p1@SH3BGRL | |short_description=p1@SH3BGRL | ||
}} | }} | ||
Latest revision as of 12:47, 16 September 2015
| Short description: | p1@SH3BGRL |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SH3BGRL_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000481106_5end |
| EntrezGene: | SH3BGRL |
| HGNC: | 10823 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 3.34e-45 | 168 |
| leukocyte | 2.40e-43 | 136 |
| hematopoietic oligopotent progenitor cell | 7.53e-43 | 161 |
| hematopoietic multipotent progenitor cell | 7.53e-43 | 161 |
| hematopoietic cell | 1.87e-40 | 177 |
| myeloid cell | 1.16e-37 | 108 |
| common myeloid progenitor | 1.16e-37 | 108 |
| hematopoietic lineage restricted progenitor cell | 2.69e-37 | 120 |
| myeloid leukocyte | 4.63e-36 | 72 |
| myeloid lineage restricted progenitor cell | 5.93e-34 | 66 |
| nongranular leukocyte | 9.99e-34 | 115 |
| granulocyte monocyte progenitor cell | 8.83e-33 | 67 |
| macrophage dendritic cell progenitor | 1.17e-31 | 61 |
| monopoietic cell | 1.67e-30 | 59 |
| monocyte | 1.67e-30 | 59 |
| monoblast | 1.67e-30 | 59 |
| promonocyte | 1.67e-30 | 59 |
| defensive cell | 4.60e-27 | 48 |
| phagocyte | 4.60e-27 | 48 |
| classical monocyte | 1.24e-23 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.24e-23 | 42 |
| connective tissue cell | 1.27e-23 | 361 |
| mesenchymal cell | 2.81e-23 | 354 |
| multi fate stem cell | 1.95e-19 | 427 |
| stem cell | 1.41e-18 | 441 |
| somatic stem cell | 1.73e-18 | 433 |
| motile cell | 1.62e-16 | 386 |
| dendritic cell | 3.26e-07 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.85e-35 | 98 |
| blood island | 2.85e-35 | 98 |
| hemolymphoid system | 1.00e-31 | 108 |
| bone marrow | 2.11e-30 | 76 |
| skeletal element | 9.20e-29 | 90 |
| bone element | 1.32e-27 | 82 |
| immune system | 1.86e-27 | 93 |
| skeletal system | 1.50e-26 | 100 |
| connective tissue | 5.85e-23 | 371 |
| musculoskeletal system | 2.21e-15 | 167 |
| lateral plate mesoderm | 1.86e-13 | 203 |
| mesoderm | 1.58e-07 | 315 |
| mesoderm-derived structure | 1.58e-07 | 315 |
| presumptive mesoderm | 1.58e-07 | 315 |
| adult organism | 2.66e-07 | 114 |